Gene
| Gene Model ID | habu1_s1827_g06773 |
|---|---|
| Locus | habu1_scaffold1827 : 1082940 ... 1085185 : - |
| To GenomeBrowser | habu1_scaffold1827:1082940..1085185 |
| Genes list of scaffold | habu1_scaffold1827 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06773.t1 | 2 | 1 | WD40 | 154 | 191 | 7.3e-22 | 76.3 | 1.7e-11 | 1.2e-07 | 31.2 |
| habu1_s1827_g06773.t1 | 2 | 2 | WD40 | 237 | 273 | 7.3e-22 | 76.3 | 1.2e-08 | 8.8e-05 | 22.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06773.t1 | gi|637270481|ref|XP_008103188.1| | PREDICTED: uncharacterized protein LOC103277907 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06773.t1 | gi|637270485|ref|XP_008103189.1| | PREDICTED: uncharacterized protein LOC103277907 isoform X3 [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06773.t1 | gi|637270477|ref|XP_008103187.1| | PREDICTED: uncharacterized protein LOC103277907 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06773.t1 | gi|632948466|ref|XP_007889613.1| | PREDICTED: probable U3 small nucleolar RNA-associated protein 13 [Callorhinchus milii] | 0.0 |
| habu1_s1827_g06773.t1 | gi|524902830|ref|XP_005107638.1| | PREDICTED: uncharacterized protein LOC101855522 [Aplysia californica] | 6.0e-39 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.5 |
| Venom grand-1 | 0.4 |
| Pit, infrared sensing | 1.5 |
| Nose | 3.9 |
| Brain-1 | 0.3 |
| Eye | 0.2 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.3 |
| Spleen | 0.1 |
| Lung | 2.6 |
| Liver | 0.0 |
| Kidney | 0.1 |
| Pancreas | 0.0 |
| Small intestine | 0.2 |
| Large intestine | 0.0 |
| Stomach | 0.2 |
| heart | 0.1 |
| ovary | 0.6 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s1827_g06773.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06773.t1 agtcgaggactttccctgcccgggagcgccgcgcatgcgtggttccgccccctgcgccggccgaggcgtagctggcaagc ggcagagacggagcaggccgatcaccagctggcccagcccaagggagcaatctcttcatttggtgagaagggagagagtg ggagcagagacagtcttcaaggaacgaaggtatgaaagagggggggggagagagaggagtaaagggagcagagccctgag aagcaagttctcacctggccccctttcattgcagctcagtgggggatgggatggaaggctgtgcctctggaatcttcaaa agcgctcctttcaaaacaccttctccaatctgcctggggataatgaacctatcctggatgtggcctgttcccaaaatagc ccacacacccctgctcctgaaaggagggaatttgccttctctaccagcactggagttttcatctgcgctttcaattttca ttgtgctgatctggagctcctggctgaactctgtgagcacaaaaccacagtcctagccctggcatggcacccacaacaaa acaaatgggtaactggtgctgaagatggcaccattcaactctggagtgaagatggtggatgttgtgtgcgagacatgaaa gcccctagaagaatcacttgtatttgcattgaccagatcaatggatgtatcattgcaggagaccatgatactatcaggat ttatgacccaaactctggagcactagtgcaaagttacacaggacatcaagattctatcaagggtctcatccatgtcccag aaatgaagcagtatgtgtcagtttcactggatggcacagctcgcatatggaaggcctaccatcaagggggatagtccaag tcccagtcaactggcaactttattattatcctacataccatctagaatccggattctgtcaaactttttattatgacctt tgggccagagaacacaacaataaaaaacataaacctgtcgttactgataaaactttaaaaaaataaaatgaaatgtacat aagacaatt |
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Protein
| Protein ID | habu1_s1827_g06773.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06773.t1 MRGSAPCAGRGVAGKRQRRSRPITSWPSPREQSLHLVRRERVGAETVFKERRYERGGGRERSKGSRALRSKFSPGPLSLQ LSGGWDGRLCLWNLQKRSFQNTFSNLPGDNEPILDVACSQNSPHTPAPERREFAFSTSTGVFICAFNFHCADLELLAELC EHKTTVLALAWHPQQNKWVTGAEDGTIQLWSEDGGCCVRDMKAPRRITCICIDQINGCIIAGDHDTIRIYDPNSGALVQS YTGHQDSIKGLIHVPEMKQYVSVSLDGTARIWKAYHQGG |
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