Gene
| Gene Model ID | habu1_s1827_g06777 |
|---|---|
| Locus | habu1_scaffold1827 : 1187717 ... 1221065 : - |
| To GenomeBrowser | habu1_scaffold1827:1187717..1221065 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| coagulation factor xii | GO:0002353 GO:0004930 GO:0007186 GO:0008236 GO:0010954 GO:0016021 GO:0030193 GO:0031638 GO:0044421 GO:1903036 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06777.t1 | 1 | 1 | 7tm_1 | 57 | 315 | 2.1e-37 | 128.6 | 1.6e-40 | 2.9e-37 | 128.1 |
| habu1_s1827_g06777.t1 | 1 | 1 | fn2 | 365 | 406 | 1.3e-14 | 53.8 | 7.2e-18 | 1.3e-14 | 53.8 |
| habu1_s1827_g06777.t1 | 2 | 1 | EGF | 416 | 446 | 5.8e-10 | 38.9 | 2.0e-09 | 3.8e-06 | 26.7 |
| habu1_s1827_g06777.t1 | 2 | 2 | EGF | 496 | 525 | 5.8e-10 | 38.9 | 1.6e-08 | 2.9e-05 | 23.9 |
| habu1_s1827_g06777.t1 | 1 | 1 | Kringle | 535 | 615 | 2.7e-23 | 81.8 | 1.5e-26 | 2.7e-23 | 81.8 |
| habu1_s1827_g06777.t1 | 1 | 1 | Trypsin | 669 | 902 | 0.0 | 219.6 | 0.0 | 0.0 | 219.1 |
| habu1_s1827_g06777.t1 | 1 | 1 | DUF1986 | 680 | 819 | 4.7e-07 | 29.3 | 4.6e-10 | 8.6e-07 | 28.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06777.t1 | gi|637270435|ref|XP_008103178.1| | PREDICTED: coagulation factor XII isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06777.t1 | gi|637270441|ref|XP_008103179.1| | PREDICTED: coagulation factor XII isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06777.t1 | gi|602626909|ref|XP_007420406.1| | PREDICTED: coagulation factor XII [Python bivittatus] | 0.0 |
| habu1_s1827_g06777.t1 | gi|530576753|ref|XP_005282343.1| | PREDICTED: coagulation factor XII [Chrysemys picta bellii] | 0.0 |
| habu1_s1827_g06777.t1 | gi|637270432|ref|XP_008103177.1| | PREDICTED: lysophosphatidic acid receptor 6-like [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.9 |
| Liver | 173.5 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s1827_g06777.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06777.t1 aaggttccatccaaaaaaggtgccggaactccattctgggcgttctatgacaaaaaaagccctggtctcagcaatggtaa ataccacaaatgttcttaaaaaactatgccagcctagccttgaaacaggaaaccaggatagggtgataaggtgcctataa tgttgtttcagaataattcccacccattttcatcttgtccaagttccttgagccagcaaaggagcaggcatcttctagat cactgaaacaccgaaggagattgtaaagggagggagatggactggaaagcatgaggatttttcccacggcaacctgagct tcttcaagatcaggaaaagttcaattcccagaatcccgccatcaagaatcgctcttcctcagaattctagatttgacacc cactttggatgttgccaagatgtggaggaatggcacagatgcatcaggggagtccttccctttgagggaagtgccaggct ctttccctaacaattcagcacatttgcagtgtgttgctgaagcagcattccagcacttacttctacccatcatttacagc ctggtttgcatcctgagcctagcctcaaatggcgtggccttatggagctcctgggtctaccgagctcaggctccacccat catgatcttcatctacaacctgattatcattgacctgctctttgccctgtcgctgccattacaggcagtgtatcatgtca ggcacaatgactggctctttggagaaggcctgtgcaaggccaccaatgccctcttcctggccaacatgttcagctgcacc cttttcctggcctgcatctgcctggagcgttatgtggctgtcctccatcctgtcctctacctgcgcctcaaatggcctct gtatcgtgtgctgctctccatagctatctggtctttggtagggattgggttgctgatcttcttctccaagagcaccgtga ctcatctcttctccaatggaaacaccgcctgcatggaaaacttcccagccgaagtctggagtggaaatctggcagctatg atcctatcttcctcagccctgggcttcttcctgcctttccttactatcattatctgttctattgtgattgcccaccgaat tatgaatctgggccatgggacaatgcaggcatcttcattgcgtaggcattcccttcaaactctcttgatggtgacgagcc tgctcaccttctgtttcctcccttttcataccatccatgtactacacgccctgggccgtattggcgttctttcagctcca ggattgctgcacttcacttgctcagcccagcgtgcagctatggcccttgctagtatcaacagtgctcttgaccccctggt atactattttaacatgaagcctgccaattggaagctaccatgctgtggcacagtcagtcaaaatcttatggagccagggg atttattcttgggtgtaattggtaagccccacaaggcgaaacatgaagtgacatcatccagtgaggaatcctgccatttc cctttccgttaccgacgcaaaatgcactactcctgtctccctgatgcctttcttaaatctcagcactggtgcgccaccac agaaaactatgaccaagaccaaaaatggaagctttgtcggaaagaggaaaggccaatagggcactgtgatcctaacccct gccagaatgggggtgcctgtgaagctaggaagattggattccattgtacctgcacagctggtttccatgggagacgctgt gagaaagaaggctgctttggatcacaaagatggttgcatatgggcaaaaaggaaacatggctgcaatattttccttctac tggactgaaggagtgtcactgtagcagaaagaagattctctgcaagacggtgcatggaaaagcgtgcagaagcaacccct gtctgaatggaggtcagtgcgtacagctgggccagaatctggtctgtagctgccctgaaaaattttctggaccactgtgt gacatagatcacactgaaatctgctacagtgagaatgggcacctataccgaggcatggctcagaggagttcctccggggc accttgcctgccctgggactctccgatcctgcttatggagtattccttcaaactcaggaatgcagtaagcctgggcctag gggaacatgccttctgcagaaatccagataacgacacccagccgtggtgtttcttgctacaagacagacgaatcacttgg gaatactgtaacattacccgctgtcatccccaaactgctggtgaaccgataccaaaagtgacagaagcaccacctctgga ggagatgaccatgagccacgcggatagcaaacccaggtctccccctggctcagcaccagtttgtggacagcgctatacaa aagtcatttcctcacgcagccgtatcgtcgggggtatggtggcacttcctggtgcccatccctatcttgctgctctctac attggagagcagttctgtggaggaagcctcattgattcctgctggatcctgactgctgcacattgtctggaattcaggcc agatgtttctagaatttcagtggtgcttggccagatcttctacaacaccagcactgaaggcattgtgaagttccaggtac agaagtatcaagtgcatgcaaattattcacaaataactaaggagcatgacattgctctggtgcaactgaaggaaaagtcc ccaggacgttgtattgaattttcaaactctatttcacctatatgtctgcctggttccttcgaggcagctgatagcagtga acactgccagattgcaggatggggacatatgtatgaaggagctgacaaactctctgtatatctgcaggaagcagatgtgc ccatcattccccatgagcagtgtcattccccagaggtacatgggtcccagattacccaacacatgctatgtgcaggatac ctggaaggaagaatcgattcatgtcagggagattctggtgggcctctggcatgtgaaaagcaaggcaaggctaccatccg tggcattgtcagctggagcacaggctgtgcccaaaagaacaaacctggggtttacaccaatgttgctcactacctcagct ggattcagagcaacatgcattagcaaggcagagagtggaaagccagtgaaattgaaatccagggccatgcagcagctctc cccaggggtttgaacatctttttctctcttattgtatgcgcagttccctaggctagatgctgaacattacagaatcggag gataccagttgtgtgggttatttttggggataataaaccatcctgcaccaaatgttcag |
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Protein
| Protein ID | habu1_s1827_g06777.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06777.t1 MWRNGTDASGESFPLREVPGSFPNNSAHLQCVAEAAFQHLLLPIIYSLVCILSLASNGVALWSSWVYRAQAPPIMIFIYN LIIIDLLFALSLPLQAVYHVRHNDWLFGEGLCKATNALFLANMFSCTLFLACICLERYVAVLHPVLYLRLKWPLYRVLLS IAIWSLVGIGLLIFFSKSTVTHLFSNGNTACMENFPAEVWSGNLAAMILSSSALGFFLPFLTIIICSIVIAHRIMNLGHG TMQASSLRRHSLQTLLMVTSLLTFCFLPFHTIHVLHALGRIGVLSAPGLLHFTCSAQRAAMALASINSALDPLVYYFNMK PANWKLPCCGTVSQNLMEPGDLFLGVIGKPHKAKHEVTSSSEESCHFPFRYRRKMHYSCLPDAFLKSQHWCATTENYDQD QKWKLCRKEERPIGHCDPNPCQNGGACEARKIGFHCTCTAGFHGRRCEKEGCFGSQRWLHMGKKETWLQYFPSTGLKECH CSRKKILCKTVHGKACRSNPCLNGGQCVQLGQNLVCSCPEKFSGPLCDIDHTEICYSENGHLYRGMAQRSSSGAPCLPWD SPILLMEYSFKLRNAVSLGLGEHAFCRNPDNDTQPWCFLLQDRRITWEYCNITRCHPQTAGEPIPKVTEAPPLEEMTMSH ADSKPRSPPGSAPVCGQRYTKVISSRSRIVGGMVALPGAHPYLAALYIGEQFCGGSLIDSCWILTAAHCLEFRPDVSRIS VVLGQIFYNTSTEGIVKFQVQKYQVHANYSQITKEHDIALVQLKEKSPGRCIEFSNSISPICLPGSFEAADSSEHCQIAG WGHMYEGADKLSVYLQEADVPIIPHEQCHSPEVHGSQITQHMLCAGYLEGRIDSCQGDSGGPLACEKQGKATIRGIVSWS TGCAQKNKPGVYTNVAHYLSWIQSNMH |
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