Gene
| Gene Model ID | habu1_s1827_g06778 |
|---|---|
| Locus | habu1_scaffold1827 : 1233916 ... 1265882 : + |
| To GenomeBrowser | habu1_scaffold1827:1233916..1265882 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| g protein-coupled receptor kinase 6 | EC:2.7.11.16 GO:0004703 GO:0005524 GO:0006468 GO:0009069 GO:0016020 GO:0038032 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06778.t2 | 1 | 1 | RGS | 55 | 170 | 1.1e-16 | 60.9 | 3.5e-20 | 1.3e-16 | 60.7 |
| habu1_s1827_g06778.t2 | 1 | 1 | Pkinase | 187 | 448 | 0.0 | 207.3 | 0.0 | 0.0 | 206.8 |
| habu1_s1827_g06778.t2 | 1 | 1 | Pkinase_Tyr | 189 | 397 | 5.6e-36 | 123.9 | 2.2e-39 | 8.1e-36 | 123.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06778.t2 | gi|513206674|ref|XP_004944940.1| | PREDICTED: G protein-coupled receptor kinase 6 isoform X5 [Gallus gallus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.0 |
| Venom grand-1 | 1.6 |
| Pit, infrared sensing | 3.1 |
| Nose | 3.1 |
| Brain-1 | 3.8 |
| Eye | 2.3 |
| fetal fibroblast | 2.7 |
| venom gland-2 | 1.3 |
| Brain-2 | 3.0 |
| Spleen | 5.9 |
| Lung | 2.9 |
| Liver | 1.5 |
| Kidney | 2.9 |
| Pancreas | 1.5 |
| Small intestine | 1.3 |
| Large intestine | 4.5 |
| Stomach | 2.7 |
| heart | 3.3 |
| ovary | 11.6 |
| cheek muscle | 3.1 |
Transcript
| Transcript ID | habu1_s1827_g06778.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06778.t1 gtgggaagaggtgacagcagcggcggcggcggcgcctcgggctggccccaatggagctggagaatatcgtggccaacact gtgctgctcaaggcgcgcgaaggtggaggtgggaatcgaaaaggcaagagtaagaaatggcgccaaatgctgcagttccc acatatcagccagtgtgaagatcttcagcatacattagagagggactactacaacttgtgttataaacagccaattggat gcctgcttttccggcatttttgtgacacacgactggaactcatgcgctgtgtcaagttcctggatgctgtggctgaatac gaagtgacccctgatgagaaacggaaagaatgtgggaagcacctgattgaagtatacttgaatcctaagagtgtggacca cgtccctgaagtacccttggagctgttaaatctgtgttctgagcaactggaagaggaaccgagtaaagaactctttaagg aatctaccaagctcatccatgactatcttagtgtggcaccttttgctgattaccttgacagcgtttacttcaaccgcttc ctgcagtggaagtatctggaaaggcggcatgtaaccaagaacactttccgccaatatcgtgtgctagggaagggaggctt tggagaggtttgtgcttgccaggtgcgggccaccggaaagatgtacgcctgcaagaagcttgagaaaaagcggataaaaa agcggaaaggggaagccatggccttaaacgagaagcagatactggagaaagtgaacagtaggtttgtagtgagtctggcc tatgcctatgaaacaaaagatgcactctgcttggtcctgactctcatgaatggtggagacctgaagttccacatctatca catgggagaagcaggatttgaagagccacgggctgttttctatgcggccgaaatctgctgtggcttggaagacctccatc gagagaggatagtttacagggacttgaagccagagaatattctactggatgaccatggtcacatccgcatttctgacctg ggactagctgttcatgttccggaagaacagacaataaaaggtcgggttggaaccgttggctacatggctcctgaagttgt gaagaatgaacggtacacattcagcccagactggtgggccttaggatgcctgctgtatgagatgattgagggtcagtctc cgttccagcagcgcaggaagaagatcaagcgtgaagaagtggaacgtctggtgaaggaagtccaggaagagtattctgag aagttctcacctttttcccgctcactgtgttccatgctcttgtgcaaagagcccttggaacggttgggctgtcgagggtc tggtgcacaagaagtgaaagaccatcctctgtttaaaaatctgaatttcaagcggctggaagctgggatgctggacccac cttttaaacctgatccccaagctatttattgcaaagacgtcctggatattgagcagttttccacagtcaaaggggtagag ttagaaccaacagaccatgacttctatcataaatttgcaacgggaagtgtccctattccctggcaaaatgagatgataga tacagaatgtttcaaggagttgaatgtatttggtccagatggcgtcatacctcctgatctggactggaaagggcagcagc ctcccctgcccaaaaagggcctactccagcgtctcttcagccgacaggactgttgcgggaactgcagtgaaagtgaagag gaaccaacccggttatgatctgactcagaaaagaaggcgctcgctcacagtcaaacacatgcccaccaccagcgtgtgtg tgtgtgtgtgtgtgtgcagctcgttgtttcaggatggcagcagactcccaccccagaggggaagtgttcgaagaccaggc agaagaggaacctcttctgcagaaaccttcagtgtactgcaagagagccgtcttgcttgctactcctattccacgttgag agagcgaagatggcaggagtgaatacggaatatcccagggctggccctgatcccaatttttgacctgctcatctcctgnn nnnnnnnnnnnnnnnnnnnnnnnnttatattactgtaaatgtgaatgtatgtataaagcatatgtacattcttaatggt |
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| Transcript ID | habu1_s1827_g06778.t2 |
| Definition | - |
>habu1_s1827_g06778.t2 gtgggaagaggtgacagcagcggcggcggcggcgcctcgggctggccccaatggagctggagaatatcgtggccaacact gtgctgctcaaggcgcgcgaaggtggaggtgggaatcgaaaaggcaagagtaagaaatggcgccaaatgctgcagttccc acatatcagccagtgtgaagatcttcagcatacattagagagggactactacaacttgtgttataaacagccaattggat gcctgcttttccggcatttttgtgacacacgactggaactcatgcgctgtgtcaagttcctggatgctgtggctgaatac gaagtgacccctgatgagaaacggaaagaatgtgggaagcacctgattgaagtatacttgaatcctaagagtgtggacca cgtccctgaagtacccttggagctgttaaatctgtgttctgagcaactggaagaggaaccgagtaaagaactctttaagg aatctaccaagctcatccatgactatcttagtgtggcaccttttgctgattaccttgacagcgtttacttcaaccgcttc ctgcagtggaagtatctggaaaggcggcatgtaaccaagaacactttccgccaatatcgtgtgctagggaagggaggctt tggagaggtttgtgcttgccaggtgcgggccaccggaaagatgtacgcctgcaagaagcttgagaaaaagcggataaaaa agcggaaaggggaagccatggccttaaacgagaagcagatactggagaaagtgaacagtaggtttgtagtgagtctggcc tatgcctatgaaacaaaagatgcactctgcttggtcctgactctcatgaatggtggagacctgaagttccacatctatca catgggagaagcaggatttgaagagccacgggctgttttctatgcggccgaaatctgctgtggcttggaagacctccatc gagagaggatagtttacagggacttgaagccagagaatattctactggatgaccatggtcacatccgcatttctgacctg ggactagctgttcatgttccggaagaacagacaataaaaggtcgggttggaaccgttggctacatggctcctgaagttgt gaagaatgaacggtacacattcagcccagactggtgggccttaggatgcctgctgtatgagatgattgagggtcagtctc cgttccagcagcgcaggaagaagatcaagcgtgaagaagtggaacgtctggtgaaggaagtccaggaagagtattctgag aagttctcacctttttcccgctcactgtgttccatgctcttgtgcaaagagcccttggaacggttgggctgtcgagggtc tggtgcacaagaagtgaaagaccatcctctgtttaaaaatctgaatttcaagcggctggaagctgggatgctggacccac cttttaaacctgatccccaagctatttattgcaaagacgtcctggatattgagcagttttccacagtcaaaggggtagag ttagaaccaacagaccatgacttctatcataaatttgcaacgggaagtgtccctattccctggcaaaatgagatgataga tacagaatgtttcaaggagttgaatgtatttggtccagatggcgtcatacctcctgatctggactggaaagggcagcagc ctcccctgcccaaaaagggcctactccagcgtctcttcagccgacagagtatcaattccatccgtcagactactaaatga agaggtgctctgttgtatcacatattcattggcacaagttgctgattgacatgaaactctgggttactcctaactggact tggacattttacggtcctcaggccacatccggtcctttggctctccgcgtccagaaagtagaaatcaaatgtaaatatgt gtatgccatgcacacaatacaactgcattttttttttattttg |
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Protein
| Protein ID | habu1_s1827_g06778.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06778.t1 MELENIVANTVLLKAREGGGGNRKGKSKKWRQMLQFPHISQCEDLQHTLERDYYNLCYKQPIGCLLFRHFCDTRLELMRC VKFLDAVAEYEVTPDEKRKECGKHLIEVYLNPKSVDHVPEVPLELLNLCSEQLEEEPSKELFKESTKLIHDYLSVAPFAD YLDSVYFNRFLQWKYLERRHVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEPRAVFYAAEICCGLEDLHRERIVYRDLKPENILLD DHGHIRISDLGLAVHVPEEQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIEGQSPFQQRRKKIKREEVERL VKEVQEEYSEKFSPFSRSLCSMLLCKEPLERLGCRGSGAQEVKDHPLFKNLNFKRLEAGMLDPPFKPDPQAIYCKDVLDI EQFSTVKGVELEPTDHDFYHKFATGSVPIPWQNEMIDTECFKELNVFGPDGVIPPDLDWKGQQPPLPKKGLLQRLFSRQD CCGNCSESEEEPTRL |
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| Protein ID | habu1_s1827_g06778.t2 |
| Definition | - |
>habu1_s1827_g06778.t2 MELENIVANTVLLKAREGGGGNRKGKSKKWRQMLQFPHISQCEDLQHTLERDYYNLCYKQPIGCLLFRHFCDTRLELMRC VKFLDAVAEYEVTPDEKRKECGKHLIEVYLNPKSVDHVPEVPLELLNLCSEQLEEEPSKELFKESTKLIHDYLSVAPFAD YLDSVYFNRFLQWKYLERRHVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEPRAVFYAAEICCGLEDLHRERIVYRDLKPENILLD DHGHIRISDLGLAVHVPEEQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIEGQSPFQQRRKKIKREEVERL VKEVQEEYSEKFSPFSRSLCSMLLCKEPLERLGCRGSGAQEVKDHPLFKNLNFKRLEAGMLDPPFKPDPQAIYCKDVLDI EQFSTVKGVELEPTDHDFYHKFATGSVPIPWQNEMIDTECFKELNVFGPDGVIPPDLDWKGQQPPLPKKGLLQRLFSRQS INSIRQTTK |
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