Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1827_g06780
Locus habu1_scaffold1827 : 1302295 ... 1310322 : +
To GenomeBrowser habu1_scaffold1827:1302295..1310322
Genes list of scaffold habu1_scaffold1827

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1827_g06780.t1 gi|602626853|ref|XP_007420378.1| PREDICTED: proline-rich protein 7 isoform X2 [Python bivittatus] 0.0
habu1_s1827_g06780.t1 gi|602626851|ref|XP_007420377.1| PREDICTED: proline-rich protein 7 isoform X1 [Python bivittatus] 0.0
habu1_s1827_g06780.t1 gi|637270419|ref|XP_008103175.1| PREDICTED: proline-rich protein 7 isoform X2 [Anolis carolinensis] 0.0
habu1_s1827_g06780.t1 gi|637270416|ref|XP_008103174.1| PREDICTED: proline-rich protein 7 isoform X1 [Anolis carolinensis] 0.0
habu1_s1827_g06780.t1 gi|543360041|ref|XP_005523713.1| PREDICTED: proline-rich protein 7 [Pseudopodoces humilis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 8.4
Venom grand-1 4.0
Pit, infrared sensing 15.2
Nose 7.1
Brain-1 8.1
Eye 2.9
fetal fibroblast 45.6
venom gland-2 3.9
Brain-2 5.5
Spleen 7.8
Lung 10.7
Liver 1.4
Kidney 2.3
Pancreas 1.5
Small intestine 3.2
Large intestine 20.9
Stomach 12.2
heart 3.8
ovary 1.1
cheek muscle 1.4

Transcript
Transcript IDhabu1_s1827_g06780.t1
Definition-
>habu1_s1827_g06780.t1
cctcacaaaggagaagaaaggaagtttccttatcaagagccaccagaaattccagctataggtcagaggcctctgttctg
gctggattgatgagggtcttatctctccctaagccatctgtgctttgaggcatagctgttcagctatctgcgacgacgca
tgaaacggcgacaggaggagaggctgcgggagcagcacctgcgcacgttggaaatggagcccttgcattacgagggctat
gggggccctgcttatgggggccctgcctatgggggaggttacatcagaagcccaccaggcattcctgtgccccaccgact
ccgcattgagccccaccaccctcaccacctcccgcccccaaggccttggagctgtaggcatgagcctgacccatctaagc
ctccatgctatgaggaagcagtgctgatggctgagccaccaccaccatacagcgaagtcctgacagacacacgtggcttg
tatcgcaagatcaacgccccgttcctgagccacgagcagccagagaagcaggagcagccgcccagctataagcccctttt
cctggatcggggctacggctcagccctccacctgccgagctcagccagccagggccccacctgcaccaacctctacttgg
agtcagagcattcacaacgtatcttcccaagctggacagactctgaactcagcaccagagacagctacgactccgggccc
tggcatctgcccgtctcaatgcctttatttggcaggactacggcagtgtagcgtgccatattgcgacctaggtgggactc
tggttgctgcatggatctgagcagcctgttcccttggcctgtgggagccaccaggtcccgtagtccaagccttccagacg
tgtctgggccacagtcttcacagcgcaaagatccccgttgcaactgacctcttggccagggcgagagtggggctggtctc
cccatctcaaccacttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnc
ttggcctaaacttcgtttcctatcttttgtttgttacattttgacaacaataaagtttgtggaacctgatttatta

Protein
Protein IDhabu1_s1827_g06780.t1
Definition-
>habu1_s1827_g06780.t1
MKRRQEERLREQHLRTLEMEPLHYEGYGGPAYGGPAYGGGYIRSPPGIPVPHRLRIEPHHPHHLPPPRPWSCRHEPDPSK
PPCYEEAVLMAEPPPPYSEVLTDTRGLYRKINAPFLSHEQPEKQEQPPSYKPLFLDRGYGSALHLPSSASQGPTCTNLYL
ESEHSQRIFPSWTDSELSTRDSYDSGPWHLPVSMPLFGRTTAV

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495