Gene
| Gene Model ID | habu1_s1827_g06784 |
|---|---|
| Locus | habu1_scaffold1827 : 1514975 ... 1549167 : + |
| To GenomeBrowser | habu1_scaffold1827:1514975..1549167 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lateral signaling target protein 2 homolog | GO:0005829 GO:0007175 GO:0031901 GO:0032266 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06784.t1 | 1 | 1 | FYVE | 439 | 501 | 2.7e-21 | 75.2 | 3.7e-25 | 2.7e-21 | 75.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06784.t1 | gi|602648343|ref|XP_007430589.1| | PREDICTED: lateral signaling target protein 2 homolog isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1827_g06784.t1 | gi|602648345|ref|XP_007430590.1| | PREDICTED: lateral signaling target protein 2 homolog isoform X2 [Python bivittatus] | 0.0 |
| habu1_s1827_g06784.t1 | gi|637270389|ref|XP_008103169.1| | PREDICTED: lateral signaling target protein 2 homolog [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06784.t1 | gi|543360394|ref|XP_005523833.1| | PREDICTED: lateral signaling target protein 2 homolog [Pseudopodoces humilis] | 0.0 |
| habu1_s1827_g06784.t1 | gi|513206701|ref|XP_425201.4| | PREDICTED: lateral signaling target protein 2 homolog isoform X2 [Gallus gallus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.7 |
| Venom grand-1 | 2.8 |
| Pit, infrared sensing | 3.4 |
| Nose | 4.1 |
| Brain-1 | 0.5 |
| Eye | 1.7 |
| fetal fibroblast | 2.6 |
| venom gland-2 | 1.6 |
| Brain-2 | 0.5 |
| Spleen | 3.2 |
| Lung | 5.0 |
| Liver | 3.0 |
| Kidney | 1.3 |
| Pancreas | 1.1 |
| Small intestine | 11.0 |
| Large intestine | 2.4 |
| Stomach | 16.2 |
| heart | 1.8 |
| ovary | 112.7 |
| cheek muscle | 2.7 |
Transcript
| Transcript ID | habu1_s1827_g06784.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06784.t1 gagttctccggccgctgcgctcccggccccagccatgctgcccgccgctgtccgaaggtggctgcatagacccaagcgtt ctgatccaagactgctgtcccagtttttctatgctgatgaacgagtgactcaagtggtaacagaaatcaactgcctggat gtagagactgatccccaacagtatctgacactgttaaaccagttgcatcttagtcaggctgagttactggctatcataga acagatcatggaggaatgtatccccaaggaacgtcacggtcgtgactatgtcatcaaattccccgaagatcttctagtgg acaacctacggaaccatatgttgtttgctgctgagtgtcttatggcacgcacctatattgatgtggaagaggaagatgga gtacggctgcgtcctctggccaaagatttgctgtgcagcttagagatggtgcgaatggtactccgagagcaaagcttaaa ccaacctggaccttattcagagactatccggagagcattaatccgctttgatgtgctttttgctgagtttgaactgagct atgtgtcatctttggtttctgttaaatcccccgaagagatctataggcagcaggagattgtggtgctcttctgtgaaacc gtggccagagctttgaaacttggctacttgactcaggagatgattgatggatatgaacctcagctgatgttcaccattcc ccgcctagctattattagtggccttctgatctatccagatggacccctcaatttggaaaggaggccagaggagatttctc gagtcttcagccctttttatgtcttacttagaaaaatcagggatttacttcatgtgctatccaaggaggagttgtacaag ctggagaaacgtgtgctgaatgagtgcactgcagattcacagccctgcagtaatagggactctccagatctccagagttt tgcatctcagtgtacctgcccatctgtcccaaggcctttggtgcaggaatctgatagtgctcaaagaagaatgttcacag atgttccactgaattctcgatggttggaattacggggccgttaccgcaatacagaggacatgattcacacattatttgtc tgtatttctggagtggcagaccagctccaaactaattttgcaagcgacctgcgcagcattctgaggagtgtctttaaaat tgtgacatcccaagtggaagaattggaagtgacagacactggacagttggatgtctgtgtggtaccaacaacgcctttct tgacagattgtgctctctgctccagcaccaggcaaggtgtgaggagagaagatactttggtgcccccagactgggtacca gacagcacttctagccattgtatggcttgtcatgtgcctttcacttttcttcggcgacggcaccactgccggagttgtgg gaagatcttctgctcccgttgctcatcccacttggcagcactgccccactttaggcatctgaagccagtccgcatctgta cacactgctacactacccacttgccttccacgaataagaacgccagttgcctgtgagcatcagtctctggatgagggctt tgtcgaatgccatctgtgcctgaggaacctccaagaactggaagacaattgcagcttgcctcaccagcaaaggattatgg gagcaatcatacctgtcttactaggattctccagggggtgaagcaaagggctttttgttgtcaggcaagagttgggttgg aggaggaagcactatgttcttataagggggaatgaactctttgcatttttatattgaagaactcttggatttgtggggtt ggaactgcactctatcattaaagaagtctgaacaaactcttctatgtgctaataaagctggctttttctataatggaa |
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Protein
| Protein ID | habu1_s1827_g06784.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06784.t1 MLPAAVRRWLHRPKRSDPRLLSQFFYADERVTQVVTEINCLDVETDPQQYLTLLNQLHLSQAELLAIIEQIMEECIPKER HGRDYVIKFPEDLLVDNLRNHMLFAAECLMARTYIDVEEEDGVRLRPLAKDLLCSLEMVRMVLREQSLNQPGPYSETIRR ALIRFDVLFAEFELSYVSSLVSVKSPEEIYRQQEIVVLFCETVARALKLGYLTQEMIDGYEPQLMFTIPRLAIISGLLIY PDGPLNLERRPEEISRVFSPFYVLLRKIRDLLHVLSKEELYKLEKRVLNECTADSQPCSNRDSPDLQSFASQCTCPSVPR PLVQESDSAQRRMFTDVPLNSRWLELRGRYRNTEDMIHTLFVCISGVADQLQTNFASDLRSILRSVFKIVTSQVEELEVT DTGQLDVCVVPTTPFLTDCALCSSTRQGVRREDTLVPPDWVPDSTSSHCMACHVPFTFLRRRHHCRSCGKIFCSRCSSHL AALPHFRHLKPVRICTHCYTTHLPSTNKNASCL |
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