Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1827_g06785
Locus habu1_scaffold1827 : 1553315 ... 1560557 : +
To GenomeBrowser habu1_scaffold1827:1553315..1560557
Genes list of scaffold habu1_scaffold1827

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1827_g06785.t1 gi|602648351|ref|XP_007430593.1| PREDICTED: max dimerization protein 3 isoform X3 [Python bivittatus] 0.0
habu1_s1827_g06785.t1 gi|602648353|ref|XP_007430594.1| PREDICTED: max dimerization protein 3 isoform X4 [Python bivittatus] 0.0
habu1_s1827_g06785.t1 gi|602648349|ref|XP_007430592.1| PREDICTED: max dimerization protein 3 isoform X2 [Python bivittatus] 0.0
habu1_s1827_g06785.t1 gi|602648347|ref|XP_007430591.1| PREDICTED: max dimerization protein 3 isoform X1 [Python bivittatus] 0.0
habu1_s1827_g06785.t1 gi|637270382|ref|XP_008103168.1| PREDICTED: max dimerization protein 3 isoform X2 [Anolis carolinensis] 1.0e-28

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.3
Venom grand-1 0.0
Pit, infrared sensing 0.6
Nose 0.1
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.4
venom gland-2 0.4
Brain-2 0.0
Spleen 0.1
Lung 0.0
Liver 0.0
Kidney 0.2
Pancreas 0.0
Small intestine 0.2
Large intestine 0.1
Stomach 0.7
heart 0.1
ovary 42.2
cheek muscle 0.3

Transcript
Transcript IDhabu1_s1827_g06785.t1
Definition-
>habu1_s1827_g06785.t1
ggctaccaagtccttatttgcgcgggtcccctgttgtcatggagctcattactagcaacattcaggttttgcttcaagcg
gccgactatttggagcgcaaagagagaggtattcattcttctccaggggcgaagctggaacaccaggaacagaaagctca
acaagagaaagagaggctacgttgtgagcagcagaatctgcaccggcgcttagaagaattgcaagctcatctgaatatgg
aactggcagaagcagatagcctggattcttctcggttctcctctgagcattctgactcagaagatgaagtggacatagaa
ggcgtggcatctgccagcattggagatgtcatggctgctttcagtactcggcaggagcgcagctattccactgtcagcaa
cttctggttatggacagaagttcagttaagaggacagcattcatctagacaagcttcaagcttttcaaaaattgctttgt
ggcaggataactgatacatggtttataagactgttttctctaccaattctctgaagtctcatatacaaaggcttgctttt
gagttgcataagaggcaaatgtaaacaggaagataattaaatcattgatgaaaaacagattct

Protein
Protein IDhabu1_s1827_g06785.t1
Definition-
>habu1_s1827_g06785.t1
MELITSNIQVLLQAADYLERKERGIHSSPGAKLEHQEQKAQQEKERLRCEQQNLHRRLEELQAHLNMELAEADSLDSSRF
SSEHSDSEDEVDIEGVASASIGDVMAAFSTRQERSYSTVSNFWLWTEVQLRGQHSSRQASSFSKIALWQDN

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