Gene
| Gene Model ID | habu1_s1827_g06786 |
|---|---|
| Locus | habu1_scaffold1827 : 1560564 ... 1563424 : - |
| To GenomeBrowser | habu1_scaffold1827:1560564..1563424 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| preli domain-containing protein mitochondrial | GO:0005634 GO:0005758 GO:0010917 GO:0010950 GO:0043234 GO:0045580 GO:0070234 GO:0090201 GO:0097035 GO:1901857 GO:1990050 GO:2001140 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06786.t1 | 1 | 1 | PRELI | 31 | 170 | 0.0 | 156.7 | 0.0 | 0.0 | 156.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06786.t1 | gi|602648355|ref|XP_007430595.1| | PREDICTED: PRELI domain-containing protein 1, mitochondrial [Python bivittatus] | 0.0 |
| habu1_s1827_g06786.t1 | gi|327265577|ref|XP_003217584.1| | PREDICTED: PRELI domain-containing protein 1, mitochondrial [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06786.t1 | gi|591381053|ref|XP_007065064.1| | PREDICTED: PRELI domain-containing protein 1, mitochondrial [Chelonia mydas] | 0.0 |
| habu1_s1827_g06786.t1 | gi|530576765|ref|XP_005282349.1| | PREDICTED: PRELI domain-containing protein 1, mitochondrial, partial [Chrysemys picta bellii] | 0.0 |
| habu1_s1827_g06786.t1 | gi|543725049|ref|XP_005503661.1| | PREDICTED: PRELI domain-containing protein 1, mitochondrial, partial [Columba livia] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 35.1 |
| Venom grand-1 | 65.5 |
| Pit, infrared sensing | 35.7 |
| Nose | 54.3 |
| Brain-1 | 16.5 |
| Eye | 53.1 |
| fetal fibroblast | 40.8 |
| venom gland-2 | 128.9 |
| Brain-2 | 22.7 |
| Spleen | 70.6 |
| Lung | 34.5 |
| Liver | 128.6 |
| Kidney | 72.3 |
| Pancreas | 206.6 |
| Small intestine | 121.3 |
| Large intestine | 75.4 |
| Stomach | 131.0 |
| heart | 15.2 |
| ovary | 195.1 |
| cheek muscle | 14.7 |
Transcript
| Transcript ID | habu1_s1827_g06786.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06786.t1 aagtcgttgcggctctcctgtttctgcatggcggcggctgcggcgcgcctgcagctgctgctcctgccgccatctttagc gctgcccgcgttgcggggacgggacggcgggagacccaagcatgtcctaacggaagatatcttgcaccgagaggtgactg atgatcagaaactgctttccaggaggctcctaaccaaaaccaaccggatgccccgctgggcagagcacttctttccatct aatgttggccgccatgtctatatcctagaagattccattgtggacctacagaatcgaaccatgaccacattcacctggaa tattaatcatgcacgtcttatggtagtggaggaacgatgtgtttacaaagagaatccagaaaacagtagctggacagaag tcaaacgggaagcctgggtctcttcccgtctctttggcgtttctcgtgctatccaggaatttggcttggctagattcaag agcaatgtgaccaagactaccaaaggttttgaatatgtgctggccaaaatgcaaggtgaagcaccatctaagacactagt ggaaactgccaaggagaccgctttggcagttactgagaaggcaaaagactttgctggcaaggcagctactacaaaaaagc aacagtatgtgtgagaaaacagttttcccactgaagggaactagaatgccactggcacagggtggtataataatactgga aggttcactttaacttaagcttcccttcctttgggacttgaccagaatgtctgtagattttatgtttttttttaattgag actgtacaaatctgacaatcatcttctttcttaaaggtgtaattatcattaaaaccatagacttcaatttatttc |
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Protein
| Protein ID | habu1_s1827_g06786.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06786.t1 MAAAAARLQLLLLPPSLALPALRGRDGGRPKHVLTEDILHREVTDDQKLLSRRLLTKTNRMPRWAEHFFPSNVGRHVYIL EDSIVDLQNRTMTTFTWNINHARLMVVEERCVYKENPENSSWTEVKREAWVSSRLFGVSRAIQEFGLARFKSNVTKTTKG FEYVLAKMQGEAPSKTLVETAKETALAVTEKAKDFAGKAATTKKQQYV |
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