Gene
| Gene Model ID | habu1_s1827_g06787 |
|---|---|
| Locus | habu1_scaffold1827 : 1563785 ... 1579704 : + |
| To GenomeBrowser | habu1_scaffold1827:1563785..1579704 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-related protein rab-24 isoform x1 | GO:0005525 GO:0005739 GO:0005776 GO:0007264 GO:0015031 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06787.t1 | 1 | 1 | Arf | 5 | 170 | 2.2e-13 | 49.8 | 1.4e-16 | 2.6e-13 | 49.5 |
| habu1_s1827_g06787.t1 | 1 | 1 | Ras | 9 | 171 | 0.0 | 159.5 | 0.0 | 0.0 | 159.1 |
| habu1_s1827_g06787.t1 | 1 | 1 | Miro | 9 | 123 | 1.4e-20 | 73.9 | 5.7e-22 | 1.1e-18 | 67.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06787.t1 | gi|602648357|ref|XP_007430596.1| | PREDICTED: ras-related protein Rab-24 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1827_g06787.t1 | gi|327265575|ref|XP_003217583.1| | PREDICTED: ras-related protein Rab-24 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06787.t1 | gi|530576700|ref|XP_005282317.1| | PREDICTED: ras-related protein Rab-24 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s1827_g06787.t1 | gi|564256350|ref|XP_006267143.1| | PREDICTED: ras-related protein Rab-24 [Alligator mississippiensis] | 0.0 |
| habu1_s1827_g06787.t1 | gi|126291020|ref|XP_001371048.1| | PREDICTED: ras-related protein Rab-24 isoform X1 [Monodelphis domestica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.3 |
| Venom grand-1 | 9.9 |
| Pit, infrared sensing | 4.8 |
| Nose | 6.3 |
| Brain-1 | 3.2 |
| Eye | 3.2 |
| fetal fibroblast | 4.7 |
| venom gland-2 | 17.1 |
| Brain-2 | 3.4 |
| Spleen | 4.5 |
| Lung | 3.8 |
| Liver | 6.8 |
| Kidney | 4.3 |
| Pancreas | 4.7 |
| Small intestine | 5.4 |
| Large intestine | 5.5 |
| Stomach | 9.1 |
| heart | 9.5 |
| ovary | 12.6 |
| cheek muscle | 23.6 |
Transcript
| Transcript ID | habu1_s1827_g06787.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06787.t1 aaccaatcctcgaatccaagttaagatcttcctgctcgcgccgctgcttccccgagtcgattcctgcctctcgagctgct gatgttagcgactaatattaggcgaagtgcctgaattggaaggctaaaaaaaagcttgtgcttctggtctggtgacttgt cttctcacaggtgaacttgcccagctgagctgcgcctctttggctgctccacctgacttgagttgggggagctctgaagg gcaacactcggctgccagggcaggagaatgagcgggcaacgcgtggatgccaaagttgtgatgctgggcaaagagtatgt aggcaagaccagcttggtggagcgatatgttcacaaccgtttccttgtaggaccttatcaaaatacaataggtgctgcat tcgtggctaaagtgatgccggtgggcggccgcacagtaactttgggtatctgggatacagctggctcagagaggtatgaa gctatgagtcgaatatactatcgtggagcaaaagctgccattgtatgttatgatctcactgacagaagcagtttccagag agcaaaattctgggtgaatgaactacagaactttgaggaaaactgcaggatctatttgtgtggcaccaaaagtgatttgc tggaagaggataagagaagacgggaaattgacttccatgatgtacaggactatgcagatgagatcaaagctgagctgttt gaaacctcaagcaagactggacagaatgtcgatgagcttttccagaaggtggctgaagattatgtgcagtttgctgcctt tgaggtaacagaggaaaaaggagttgatctgaatcaaaagagcactaccacctatttttacagctgttgtcatcactgaa ttttttattttgccaaaagtaacgttcttcaccagagacagcaattcatgctttttctggagtcacgcagaaacaaaaga tgtttgcatttcgccattttcagcaattagcagcgctcggcctgcaggtgttcaaggaaaaccaactttaagcactaagg ttccatttagtcataatgctttacaaagtcattagttgtacttggagagaatgaaatgaatcagagaagaggatgagatg cacaaccaggtagggaatatttcgcagtgccgagtagatactgtcattgtggaaagccaacattgaaaaaagtaatggat ctgaatttgaactgccactgcaacaatgatgattgcctacaggccctgaataccccagagttatctattccaagaggaga ggcttaacgttgggacagagttagaatttctgctctgtgccaaaatgtgaacatctacagaggaccaaatgggagctatt caaaaaagtttttgcttcaaactggagcttaacagtctgtgagagttcagatgcccaggcaaatagaatagggtggcaag ctaaaaatggtcaaagagtttgctgatttcatagtacgaaatggaagccgtattagatatgtgaagaccctgcatagtga ataatatcgccatatacagggtgaagtaatttatttgattccccagctacagtttaaagaaaccaccatcagtaccatag caagctatatttctgtggtgcagataatatatctgcctgtttacgtaattctaaatgcttctccttaatggaaagacagt actaccaatctggcaactagtcaggtctaaaatgttgcgttaactggaaaatgaagaaaaaagaatgagaacttcaggca agtgctggagcatttcatgttccagtgtgagaactgtaatcttggccatctctctttttaaatgacaggacaccttaggg ctgccccactaaattcaagtcgatcttctgtaggtggggtgtgggagtgttgcaggaggcaatacaaaaggcttactaag ctagacac |
|
Protein
| Protein ID | habu1_s1827_g06787.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06787.t1 MSGQRVDAKVVMLGKEYVGKTSLVERYVHNRFLVGPYQNTIGAAFVAKVMPVGGRTVTLGIWDTAGSERYEAMSRIYYRG AKAAIVCYDLTDRSSFQRAKFWVNELQNFEENCRIYLCGTKSDLLEEDKRRREIDFHDVQDYADEIKAELFETSSKTGQN VDELFQKVAEDYVQFAAFEVTEEKGVDLNQKSTTTYFYSCCHH |
|