Gene
| Gene Model ID | habu1_s1827_g06789 |
|---|---|
| Locus | habu1_scaffold1827 : 1662915 ... 1737949 : - |
| To GenomeBrowser | habu1_scaffold1827:1662915..1737949 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fibroblast growth factor receptor 4 | GO:0001759 GO:0005007 GO:0005524 GO:0005634 GO:0005783 GO:0005887 GO:0005911 GO:0008201 GO:0008284 GO:0008543 GO:0010715 GO:0016477 GO:0017134 GO:0018108 GO:0042593 GO:0045862 GO:0046777 GO:0048554 GO:0055062 GO:0061144 GO:0070374 GO:0070857 GO:2000188 GO:2000573 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06789.t1 | 2 | 1 | V-set | 42 | 111 | 5.6e-16 | 58.4 | 5.5e-07 | 0.00081 | 19.2 |
| habu1_s1827_g06789.t1 | 3 | 1 | I-set | 43 | 111 | 1.1e-37 | 127.7 | 1.1e-10 | 1.7e-07 | 30.9 |
| habu1_s1827_g06789.t1 | 3 | 1 | Ig_2 | 43 | 118 | 2.8e-31 | 107.4 | 2.4e-11 | 3.5e-08 | 33.4 |
| habu1_s1827_g06789.t1 | 3 | 1 | Ig_3 | 50 | 107 | 4.7e-23 | 81.4 | 4.4e-09 | 6.5e-06 | 26.5 |
| habu1_s1827_g06789.t1 | 3 | 1 | ig | 51 | 105 | 3.3e-21 | 75.1 | 4.4e-09 | 6.5e-06 | 26.1 |
| habu1_s1827_g06789.t1 | 3 | 2 | I-set | 166 | 246 | 1.1e-37 | 127.7 | 9.5e-18 | 1.4e-14 | 53.6 |
| habu1_s1827_g06789.t1 | 3 | 2 | Ig_2 | 167 | 239 | 2.8e-31 | 107.4 | 1.8e-12 | 2.6e-09 | 37.0 |
| habu1_s1827_g06789.t1 | 3 | 2 | Ig_3 | 170 | 233 | 4.7e-23 | 81.4 | 8.4e-11 | 1.2e-07 | 32.0 |
| habu1_s1827_g06789.t1 | 3 | 2 | ig | 170 | 231 | 3.3e-21 | 75.1 | 4.9e-08 | 7.2e-05 | 22.8 |
| habu1_s1827_g06789.t1 | 2 | 2 | V-set | 260 | 345 | 5.6e-16 | 58.4 | 1.4e-06 | 0.0021 | 17.9 |
| habu1_s1827_g06789.t1 | 3 | 3 | I-set | 261 | 355 | 1.1e-37 | 127.7 | 3.4e-13 | 5.0e-10 | 39.0 |
| habu1_s1827_g06789.t1 | 3 | 3 | Ig_2 | 261 | 345 | 2.8e-31 | 107.4 | 4.5e-11 | 6.7e-08 | 32.5 |
| habu1_s1827_g06789.t1 | 3 | 3 | Ig_3 | 262 | 342 | 4.7e-23 | 81.4 | 1.5e-06 | 0.0023 | 18.4 |
| habu1_s1827_g06789.t1 | 3 | 3 | ig | 269 | 339 | 3.3e-21 | 75.1 | 5.8e-08 | 8.5e-05 | 22.5 |
| habu1_s1827_g06789.t1 | 1 | 1 | Pkinase_Tyr | 472 | 747 | 0.0 | 341.8 | 0.0 | 0.0 | 341.4 |
| habu1_s1827_g06789.t1 | 1 | 1 | Pkinase | 474 | 746 | 0.0 | 158.3 | 0.0 | 0.0 | 157.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06789.t1 | gi|602648363|ref|XP_007430599.1| | PREDICTED: fibroblast growth factor receptor 4 [Python bivittatus] | 0.0 |
| habu1_s1827_g06789.t1 | gi|637270285|ref|XP_003217621.2| | PREDICTED: fibroblast growth factor receptor 4 [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06789.t1 | gi|542149804|ref|XP_005483850.1| | PREDICTED: fibroblast growth factor receptor 4 [Zonotrichia albicollis] | 0.0 |
| habu1_s1827_g06789.t1 | gi|699681363|ref|XP_009902920.1| | PREDICTED: fibroblast growth factor receptor 4 [Picoides pubescens] | 0.0 |
| habu1_s1827_g06789.t1 | gi|543254117|ref|XP_005418953.1| | PREDICTED: fibroblast growth factor receptor 4 [Geospiza fortis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.9 |
| Venom grand-1 | 0.8 |
| Pit, infrared sensing | 2.0 |
| Nose | 0.3 |
| Brain-1 | 0.6 |
| Eye | 0.8 |
| fetal fibroblast | 8.6 |
| venom gland-2 | 0.2 |
| Brain-2 | 0.6 |
| Spleen | 0.4 |
| Lung | 6.8 |
| Liver | 4.2 |
| Kidney | 5.8 |
| Pancreas | 0.0 |
| Small intestine | 14.6 |
| Large intestine | 0.1 |
| Stomach | 0.1 |
| heart | 7.0 |
| ovary | 7.5 |
| cheek muscle | 8.9 |
Transcript
| Transcript ID | habu1_s1827_g06789.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06789.t1 gcatccttttcttccgaggagcggagcccgggaagacggagtagtggaacagctctaagccggcaggaggaggaaagcat ttaagtgtcccaactgggagccaaagtgaagaaggcaacaggatgacagccctgtggtgtgatcttcttaggcttctggt ggtagcaattatatctgcttggatatctgcttccacagaaggaaccagggatccagagatatttgacagccacatgcttg agacagaagaggagcatctggttttggatccagggagccagctgaagctctattgcagcaccaatcacactcttgctatc acatggtataaggaagataagcaacttttccctagtgagcgcatccacattcagcaaaatttgctggagatccctgaagc cacctatgaagattcaggattatactcatgccacgcttggaatactggagaaagcctgcgtaattttactatctctgttg tagattcattggcttcaggggacgatgatgaagacagtgatgtggagaatgctcacattgattctaatgaggagcctgca caggcccatcgagcaccctattggacacaccctcatcgaatggacaagaagctgcatgcagtcccagcaggaaatacagt caagttccgctgcccagcttcaggaaatcccaccccatctatccgctggctgaaaaacgggcgggaattccgtggggagc accgtattggaggaattcggctcaggcatcaacactggagtttggtcatggaaagcgtggtaccctctgatcgaggcaac tatacatgcttggtggagaataaatttggcagcattcgctacagctactttctggatgtgctagagaggtctccacatag acctatcttgcaagctgggctgcctgccaataccacagcagtgatggggagtgatgtagagttcttttgcaaggtataca gcgatgcacagccccacatacagtggcttaaacacatcaaagtgaatggcagcagttttggtccagatggagtcccctac gtgcagatccttaagacagcagatattaacagctcagaagtggaagtcctctacttgcagaatgtctccatggaggatgc tggtgaatacacctgcctggctggaaattctatcggcttgtcctaccagtccgcctggcttactgtgcttccagatgaag aagaagttgaagaagtatatgcccctgaaatcaagtacactgacataattatctacacttcagggtctttagctattgct atggctattgtcattgttgttttatgccgcatgcagattcagccaagcaagcagcctctggaaccaatggctgtgcacaa actctccaaatttcctcttatccgacagttctccttggaatcaagctcctcagggaagtccacaacatcactaatgcgtg ttactcgcctctcctcaagctgtactcccatgctagctggggttatggaagtggaactgccactggattccaagtgggaa ttcccacgggacaggctggtgctaggcaagcccttaggggagggctgttttgggcaggtggtgagagcagaagcttatgg gattgatccagaacggccagagcgtcctctcactgttgctgttaaaatgctgaaagataatgctacagataaagacttgg ctgacctcatttcagaaatggagatgatgaaactgatggaccaacacaagaatatcatcaacctattgggtgtctgtacc caagatggtcctctctatgtgattgtggagtttgctgccaaggggaatttgcgggagtatctgcgagcccgccgacctcc gacacctgattacacatttgatattaccaagatgccagaggagcagctttccttcaaagacttggtttcttgtgtttacc aagtagcccgtggcatggagtacctggagtccaagcggtgtattcatcgggacctggctgctcgcaatgttcttgttact gaagagaatgtgatgaaaattgctgattttggcttggcccgtggagttcatgatatagactactataagaaaaccagcaa tggtcgcttgcctgtaaaatggatggcaccagaagctctgtttgacagagtgtacacacaccaaagtgatgtgtggtcct ttgggattctcatgtgggagatttttacactgggtggctccccgtatcctggcatcccagtggaagaactattcaaactc ctcaaagaaggtcaccgaatggacaagccctccaattgtacccatgaactgtacatgatgatgagagaatgctggcacgc tgtgccttcccaacgacccacctttaagcagttagtggagggattggataaagtcttggttgctgtctctgatgagtatc tggacctgtcaatgccttttgaacagtattccccatcctgtgaagacacaactagcacctgttcctctgatgattcagtc ttcacccatgatcctttgccaatcactccttgcctttttccttatcacaataatcctttccagaatctgcttattccaag ctccacaataaagattctgattgggtcagtggttatcaacctttttaatgccgtgaccccaaccggtcgtaagtcgagga ctaaaccggtcgtaagtcgaggactaaaccggtcccctgccaagccggtccacttcttctggagccaaaggagcagcttc attctgcagctgcattctggcctgcatttcgcagtcaggcgtttccggaaggcctctgcagccgagtaccaagctatgga ttcaatccatagctcagttctcagcttcagtggccttttcagaaatgcaggcctgactgcagaagaggcctcagaagaag aagtggaccggcaacgagaggcctggctgcaaggttatgaacgggctgtggccaagtaccaggccatgacccaggacttg gggacccctgaattgttctgtggtaaattggagactggaaagagacctctgggtcattcatgcaagtgctacaaagatgc agtgaaggaaacatataccattgtgacatccaaccaagagaactagaagctgtggctgttgatagaattcactggtgtta tatagtagtctgctttcccagtagagaagatttattttattttaatctccttttgcttttgttaataaatagtttttaaa tttgaagaaat |
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Protein
| Protein ID | habu1_s1827_g06789.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06789.t1 MTALWCDLLRLLVVAIISAWISASTEGTRDPEIFDSHMLETEEEHLVLDPGSQLKLYCSTNHTLAITWYKEDKQLFPSER IHIQQNLLEIPEATYEDSGLYSCHAWNTGESLRNFTISVVDSLASGDDDEDSDVENAHIDSNEEPAQAHRAPYWTHPHRM DKKLHAVPAGNTVKFRCPASGNPTPSIRWLKNGREFRGEHRIGGIRLRHQHWSLVMESVVPSDRGNYTCLVENKFGSIRY SYFLDVLERSPHRPILQAGLPANTTAVMGSDVEFFCKVYSDAQPHIQWLKHIKVNGSSFGPDGVPYVQILKTADINSSEV EVLYLQNVSMEDAGEYTCLAGNSIGLSYQSAWLTVLPDEEEVEEVYAPEIKYTDIIIYTSGSLAIAMAIVIVVLCRMQIQ PSKQPLEPMAVHKLSKFPLIRQFSLESSSSGKSTTSLMRVTRLSSSCTPMLAGVMEVELPLDSKWEFPRDRLVLGKPLGE GCFGQVVRAEAYGIDPERPERPLTVAVKMLKDNATDKDLADLISEMEMMKLMDQHKNIINLLGVCTQDGPLYVIVEFAAK GNLREYLRARRPPTPDYTFDITKMPEEQLSFKDLVSCVYQVARGMEYLESKRCIHRDLAARNVLVTEENVMKIADFGLAR GVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPSNCT HELYMMMRECWHAVPSQRPTFKQLVEGLDKVLVAVSDEYLDLSMPFEQYSPSCEDTTSTCSSDDSVFTHDPLPITPCLFP YHNNPFQNLLIPSSTIKILIGSVVINLFNAVTPTGRKSRTKPVVSRGLNRSPAKPVHFFWSQRSSFILQLHSGLHFAVRR FRKASAAEYQAMDSIHSSVLSFSGLFRNAGLTAEEASEEEVDRQREAWLQGYERAVAKYQAMTQDLGTPELFCGKLETGK RPLGHSCKCYKDAVKETYTIVTSNQEN |
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