Gene
| Gene Model ID | habu1_s1827_g06790 |
|---|---|
| Locus | habu1_scaffold1827 : 1791555 ... 1824089 : - |
| To GenomeBrowser | habu1_scaffold1827:1791555..1824089 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger protein 346 isoform x1 | GO:0003676 GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06790.t1 | 4 | 1 | zf-met | 36 | 59 | 7.3e-26 | 89.5 | 3.6e-09 | 6.0e-06 | 26.2 |
| habu1_s1827_g06790.t1 | 3 | 1 | zf-C2H2_jaz | 37 | 59 | 5.7e-18 | 64.5 | 2.1e-07 | 0.00035 | 20.6 |
| habu1_s1827_g06790.t1 | 4 | 2 | zf-met | 99 | 122 | 7.3e-26 | 89.5 | 8.8e-11 | 1.4e-07 | 31.4 |
| habu1_s1827_g06790.t1 | 4 | 3 | zf-met | 167 | 190 | 7.3e-26 | 89.5 | 1.2e-09 | 2.0e-06 | 27.7 |
| habu1_s1827_g06790.t1 | 3 | 2 | zf-C2H2_jaz | 167 | 191 | 5.7e-18 | 64.5 | 2.9e-07 | 0.00048 | 20.1 |
| habu1_s1827_g06790.t1 | 3 | 3 | zf-C2H2_jaz | 219 | 244 | 5.7e-18 | 64.5 | 1.5e-06 | 0.0025 | 17.9 |
| habu1_s1827_g06790.t1 | 4 | 4 | zf-met | 221 | 243 | 7.3e-26 | 89.5 | 1.5e-06 | 0.0025 | 17.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06790.t1 | gi|602658992|ref|XP_007435194.1| | PREDICTED: zinc finger protein 346 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s1827_g06790.t1 | gi|602658990|ref|XP_007435193.1| | PREDICTED: zinc finger protein 346 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1827_g06790.t1 | gi|602658994|ref|XP_007435195.1| | PREDICTED: zinc finger protein 346 isoform X3 [Python bivittatus] | 0.0 |
| habu1_s1827_g06790.t1 | gi|530576706|ref|XP_005282320.1| | PREDICTED: zinc finger protein 346 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s1827_g06790.t1 | gi|637270278|ref|XP_003217582.2| | PREDICTED: zinc finger protein 346 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.4 |
| Venom grand-1 | 11.0 |
| Pit, infrared sensing | 12.8 |
| Nose | 12.1 |
| Brain-1 | 8.9 |
| Eye | 14.5 |
| fetal fibroblast | 17.4 |
| venom gland-2 | 6.3 |
| Brain-2 | 11.9 |
| Spleen | 7.2 |
| Lung | 13.0 |
| Liver | 8.4 |
| Kidney | 15.9 |
| Pancreas | 9.3 |
| Small intestine | 8.2 |
| Large intestine | 8.7 |
| Stomach | 10.4 |
| heart | 19.1 |
| ovary | 49.3 |
| cheek muscle | 22.0 |
Transcript
| Transcript ID | habu1_s1827_g06790.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06790.t1 tcggagttctgggagaagacggacacttcgggggcggcgacgctggagaaagatggcggacgaagcgggtagcaacggag acgcttcagccttgccggtgggaaaggaggcagtggatcggctgatcaaagaaaatagccacatcttcaccgacacccag tgcaaagtatgtagtgcggtgctcatctctgaatctcagaagcttgctcattatcagagtaagaagcatgcaaacaaagt tcggagatacatggctatccatgtggaagaggaattcagtcagaataaaaaaataaagctagaaacagagcagcaacaga gcagtaacggtgaagacaggaacaaatgctgccccatctgtaacatgaccttttcttcacctgttgtggctaattctcac tacttaggcaagactcatgccaagaatttgaaactgaagctgcactctcctaaaacagaagttttacccattcagaaaga gcctattaatcttcttcccactaccgtgtcctctaatgaagagaatcaaaacacttctgacccagacaaattctgcaatc tctgccatgctacattcaataatccactgatggcaaaacaacactatgtcggcaagaaacacaaaaagcaggaaaccaag cttaagctgatggcacactatgggagaactcccgaggaaccagctgtctccaatgctggaaagggatatccctgcaatga ctgtaacatagtactgaattctatagagcaatatcaagctcacatcagtggcttcaaacacaagaaccagtctgcaagtt ctactctacctgtgctaataataaacgccaccagacctccacctcctccaagcagattgagcccagcctgtgagatcaag tagggaggagctgcttttggtcccacgtttccgagatatcaagggagccacagcttctccatagctatgccaatgctaca gaatggctcccgactgaaatcaaattgggcccctccttgataggttttaggaagttattaaaaatgacttttttttaata gaac |
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Protein
| Protein ID | habu1_s1827_g06790.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06790.t1 MADEAGSNGDASALPVGKEAVDRLIKENSHIFTDTQCKVCSAVLISESQKLAHYQSKKHANKVRRYMAIHVEEEFSQNKK IKLETEQQQSSNGEDRNKCCPICNMTFSSPVVANSHYLGKTHAKNLKLKLHSPKTEVLPIQKEPINLLPTTVSSNEENQN TSDPDKFCNLCHATFNNPLMAKQHYVGKKHKKQETKLKLMAHYGRTPEEPAVSNAGKGYPCNDCNIVLNSIEQYQAHISG FKHKNQSASSTLPVLIINATRPPPPPSRLSPACEIK |
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