Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1827_g06792
Locus habu1_scaffold1827 : 1959960 ... 1993824 : +
To GenomeBrowser habu1_scaffold1827:1959960..1993824
Genes list of scaffold habu1_scaffold1827

Annotation by Blast2GO
Annotation GO
low quality protein: hexokinase-3 EC:2.7.1.1 GO:0004396 GO:0005524 GO:0005739 GO:0005982 GO:0005985 GO:0006000 GO:0006012 GO:0006013 GO:0006040 GO:0006094 GO:0006096 GO:0019872 GO:0046835

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1827_g06792.t1 2 1 Hexokinase_1 46 245 0.0 421.6 0.0 0.0 176.5
habu1_s1827_g06792.t1 2 1 Hexokinase_2 251 490 0.0 542.7 0.0 0.0 224.1
habu1_s1827_g06792.t1 2 2 Hexokinase_1 495 696 0.0 421.6 0.0 0.0 243.1
habu1_s1827_g06792.t1 2 2 Hexokinase_2 699 938 0.0 542.7 0.0 0.0 318.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1827_g06792.t1 gi|637356422|ref|XP_008119319.1| PREDICTED: hexokinase-3 [Anolis carolinensis] 0.0
habu1_s1827_g06792.t1 gi|641779238|ref|XP_008172494.1| PREDICTED: hexokinase-3 [Chrysemys picta bellii] 0.0
habu1_s1827_g06792.t1 gi|541963681|ref|XP_005437079.1| PREDICTED: LOW QUALITY PROTEIN: hexokinase-3 [Falco cherrug] 0.0
habu1_s1827_g06792.t1 gi|529424172|ref|XP_005231929.1| PREDICTED: hexokinase-2-like [Falco peregrinus] 0.0
habu1_s1827_g06792.t1 gi|675432046|ref|XP_008930138.1| PREDICTED: hexokinase-3 [Manacus vitellinus] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.0
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.1
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.1
heart 0.2
ovary 5.6
cheek muscle 0.3

Transcript
Transcript IDhabu1_s1827_g06792.t1
Definition-
>habu1_s1827_g06792.t1
atagaccctggaaactgccatttttatggttggctaatgagtggactggctgagaatcaggacaacatcaagtcactttt
tataaagcagtatttgtggaattaaacttgacattaagattatataacttttttagatttaaaaacttgtgtttgcatat
tggagaaattaagacctttttatattggcagagtattactgtattcattgaagctgagcaaatgtttcctaaagaaaggg
gaagttcaactagctttgtgtccattaccaaagcaactttacaaactggctcagaagccagacctgctcataggttaata
cctcatcgaccttctcctaaaatttcctctatccctgaacacatccagaaacgtattctgcccttttacgtaaccctgga
acagcttcaatctgtgaagaacttaatggtggcagccttggaaaagggcctcaaagaaaaggacaaagcaaccagttact
tacctatgttgccaacttatgtttctgctttgcccgatggtagtgagagaggggattttctgggactagagttgactttt
gatcaggtgaaagtcttgctgttacaactgacggataatgttgatgaaccaatggtggtgaaaaaaaagactttctcatt
tcctgagaagatcttgagtggcaatggacaacaggtttttgaattcatggctcaatgcctgagcacatttttgggtggac
ttaatttaagcaagaaatatttcccactgggtttctccttccccttctcttgtgatcatattgcactgaaccagtgtaaa
ctgattagatggacgaaggatttccgatggccaggtgtggaggggaaagatgtgaccaaattgctccaaacagctatcaa
cgaggtttgcaagaattaccaaatagaagtccttgctgttgtgaatgatgctgtgggagatttgataagctgttcttcta
atgtcaggccatgtcaaatgggagtaatgatagatgctggcactaactgttgttatatggaagatacacagcgcatacca
ggaaacgtgcaggaaactaggggatacatgtgcataaatacagaatgggggagttttgggaataatggagaattgaatga
gatgctaacagagtttgacacgttggtagataaagaatccatggatcaaggaaaatgcaggtttgagaagatgaccagtt
cctattatgttcgtgagactgtccgaattattttggctaatctgtctgagaatgctgaattattcagtggtgttctgact
cccacattattaatcaaggggaaactggcactgcaagacattgtggaggtcacagatgataaagtgggtcttgccaaaac
caaaaatttcctttgtcgtcttggactagtagcaagcaatcaagattgtttccatgtgcaagaaatatgccaagctgtat
acacccgttctgccaaactctgtgctgctggagtggctggcgttctcacacatattcataaacagcagcagctcccagag
atgaagacctgtgtagttatgagtggggacatgtacaagagccattcagtgtacaatgagatgctacagcaaaccctgaa
agagctggttcccgagtattctctcacattcatcccatcagatgatggcagtaccttaggggctgccatagtgacagctg
tagaagtgaagcttagaaaccaccgagagggactggctcaagttctggctcctttaaagctttcaattgtagatcttgaa
agattacggaatgggatcagacaagagatggagaacggcctgtcgaaggcagccagcaagaaaagctgtctacgcatgtt
gcccactttcgtctgttatttgcctgatggctctgagagaggggatttcctggcactggatctcggtggaaccaatttcc
gagtgttgatggtacaggtgaaaacccaagaggagggcggtgtgcacatcatcaatgagacttataccattccaccagaa
ataacccaaagtactggggtacagctttttgaccacattgtgaactgtatggtggattttcatattaagcacgggatgtc
tgaacatattctaccgctcggtttcactttttcctttccatgcaatcaaataaccctggataagggcatcttgctgagat
ggactaagggcttcagcgccactgactgtgtaggagaagatgttgtgaatttgttgcgggatgcagtacagcgtcagaag
actattgatgtagatgtgattgccctagtgaatgacacagtgggaacaatgatgtcatgtgcctacctagaccataattg
tgaagttggtcttattgttggaactggatgcaatgcttgctacatggaagaaatgaggaatgtgggctctatggagagta
atgatggcagaatgtgcatcaatatggaatggggggcatttggagatgatggctgtcttgaccactacataacaccttat
gatgacatagtggataaagaatctctcaatcctaaccaacaaagatttgagaagatgattagtggcatgtatttgggtga
gatagtgcgttatgttctgttggagttagcatctcgcaagatcctctttagggatcataagttaaaaggacttcagaaca
aaggcatctttcctactaaattgttatctgacattgagaatgacagcgaaagccgccaacatgtttatcacatcctggaa
gagctggggctgcctgtttctcctgaggacgccaaagtggtgaaggaagtgtgtcataccgtgacttcacgagctgctat
gatgtgtgcagctggagtggcagctgtagtagaaaagattcgagaaaataagcgcatgacaaagctggaggtgacagttg
gcgtggatgggacagtgtataagatgaacccttactttgcaaaaaaacttcaggatacagtagctctgctggctccaaac
tgcaatgtcaaattcttattgtcagaggatggctcaggaaagggagctgcgctgattgctgctgtggcctgccgtacaaa
gatctcttaataagcaggaggctggattgttctccacttgagaaaggccttgatctgcagcatggactttattcttcttt
aaggcagctgtgacaaaagtgcagaaagccagatttggatagctgtggtactccatctttgcagttttgtttaacattcc
cgattcatgctcaaagcaaggagagaaataaaccaaactccactgcctcttgaa

Protein
Protein IDhabu1_s1827_g06792.t1
Definition-
>habu1_s1827_g06792.t1
MFPKERGSSTSFVSITKATLQTGSEARPAHRLIPHRPSPKISSIPEHIQKRILPFYVTLEQLQSVKNLMVAALEKGLKEK
DKATSYLPMLPTYVSALPDGSERGDFLGLELTFDQVKVLLLQLTDNVDEPMVVKKKTFSFPEKILSGNGQQVFEFMAQCL
STFLGGLNLSKKYFPLGFSFPFSCDHIALNQCKLIRWTKDFRWPGVEGKDVTKLLQTAINEVCKNYQIEVLAVVNDAVGD
LISCSSNVRPCQMGVMIDAGTNCCYMEDTQRIPGNVQETRGYMCINTEWGSFGNNGELNEMLTEFDTLVDKESMDQGKCR
FEKMTSSYYVRETVRIILANLSENAELFSGVLTPTLLIKGKLALQDIVEVTDDKVGLAKTKNFLCRLGLVASNQDCFHVQ
EICQAVYTRSAKLCAAGVAGVLTHIHKQQQLPEMKTCVVMSGDMYKSHSVYNEMLQQTLKELVPEYSLTFIPSDDGSTLG
AAIVTAVEVKLRNHREGLAQVLAPLKLSIVDLERLRNGIRQEMENGLSKAASKKSCLRMLPTFVCYLPDGSERGDFLALD
LGGTNFRVLMVQVKTQEEGGVHIINETYTIPPEITQSTGVQLFDHIVNCMVDFHIKHGMSEHILPLGFTFSFPCNQITLD
KGILLRWTKGFSATDCVGEDVVNLLRDAVQRQKTIDVDVIALVNDTVGTMMSCAYLDHNCEVGLIVGTGCNACYMEEMRN
VGSMESNDGRMCINMEWGAFGDDGCLDHYITPYDDIVDKESLNPNQQRFEKMISGMYLGEIVRYVLLELASRKILFRDHK
LKGLQNKGIFPTKLLSDIENDSESRQHVYHILEELGLPVSPEDAKVVKEVCHTVTSRAAMMCAAGVAAVVEKIRENKRMT
KLEVTVGVDGTVYKMNPYFAKKLQDTVALLAPNCNVKFLLSEDGSGKGAALIAAVACRTKIS

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