Gene
| Gene Model ID | habu1_s1827_g06793 |
|---|---|
| Locus | habu1_scaffold1827 : 1994036 ... 2110265 : - |
| To GenomeBrowser | habu1_scaffold1827:1994036..2110265 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| netrin receptor partial | GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06793.t2 | 1 | 1 | I-set | 262 | 341 | 1.1e-10 | 41.2 | 2.1e-12 | 5.2e-09 | 35.8 |
| habu1_s1827_g06793.t2 | 1 | 1 | Ig_2 | 270 | 351 | 1.9e-09 | 37.5 | 1.8e-09 | 4.5e-06 | 26.6 |
| habu1_s1827_g06793.t2 | 1 | 1 | Ig_3 | 275 | 337 | 3.6e-06 | 27.3 | 2.3e-08 | 5.6e-05 | 23.5 |
| habu1_s1827_g06793.t2 | 1 | 1 | ZU5 | 552 | 651 | 2.1e-34 | 117.2 | 1.5e-37 | 3.8e-34 | 116.4 |
| habu1_s1827_g06793.t2 | 1 | 1 | Death | 881 | 942 | 1.1e-11 | 44.3 | 8.6e-15 | 2.1e-11 | 43.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06793.t2 | gi|602641206|ref|XP_007427408.1| | PREDICTED: netrin receptor UNC5A isoform X3 [Python bivittatus] | 0.0 |
| habu1_s1827_g06793.t2 | gi|525012055|ref|XP_005053640.1| | PREDICTED: netrin receptor UNC5A isoform X2 [Ficedula albicollis] | 0.0 |
| habu1_s1827_g06793.t2 | gi|727017985|ref|XP_010397973.1| | PREDICTED: LOW QUALITY PROTEIN: netrin receptor UNC5A [Corvus cornix cornix] | 0.0 |
| habu1_s1827_g06793.t2 | gi|449474856|ref|XP_004175913.1| | 0.0 | |
| habu1_s1827_g06793.t2 | gi|512947787|ref|XP_004836370.1| | PREDICTED: netrin receptor UNC5A isoform X2 [Heterocephalus glaber] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.7 |
| Venom grand-1 | 0.6 |
| Pit, infrared sensing | 0.8 |
| Nose | 1.7 |
| Brain-1 | 4.4 |
| Eye | 1.7 |
| fetal fibroblast | 0.4 |
| venom gland-2 | 0.2 |
| Brain-2 | 6.9 |
| Spleen | 1.5 |
| Lung | 0.0 |
| Liver | 0.5 |
| Kidney | 0.3 |
| Pancreas | 5.5 |
| Small intestine | 0.1 |
| Large intestine | 0.0 |
| Stomach | 0.4 |
| heart | 3.4 |
| ovary | 5.1 |
| cheek muscle | 0.3 |
Transcript
| Transcript ID | habu1_s1827_g06793.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06793.t1 gcggcattaaaaaggttgagaaccactggactagagaaaggaggccgtgtggatcaggcctctttacagcgttccttcca aggatgaaaccagatgttaagtggttacgaagtgctccaacttggcctgaatattgggatgaagaattccagaagattgc ttcaagccgcaaaatgattaatgtgtgtaaaaatgagcagcttcacataaaactcttcatggttgatttatcatcccacc cctttgctgcttttggcttcagtcagactagtgggctcatctccagcgctgccagccaggatctcctgccagatcagttt agtccagtttgcatcaaagggaggccactggaagttaatgcagccaacccagagaaggatggagatagaaaaactattac aaaaggtttgccaggatgcttagcagttcaacatgcagttgatcaaagatcactaaagagctgctgtcattttgatgata ttgaaaaagatgctcaacaaagtgccacggtgcccattcctgtgcctggctctggctctgacctgctcccccacttcctg ctagaacctgaggatgtttatattgtcaaaaacaaacctgtgacattgacgtgcaaggccctgcctgccacccagattta cttcaaatgcaatggtgaatgggtgcaccaaggtgaccacatcatacagcgcagcaaggataagagcactggcctgcccc tcatggaggtacggatagatatctcaaggcagcaggtggagaagatctttggcttggaagagtactggtgtcagtgtgtg gcctggagttcttccggcaccaccaaaagccagaaggcctttgtgcgcattgcgtacttgaggaagaattttgagcagga gccagtggccaaagaagtctccattgagcagggaattgtgctgccttgccgccctccagaggggattccacctgctgaag tggagtggctgcgcaacgaagaacttgtggacccaaccctggaccccaattactacattacactggaacatagcttggtg gtgaaacaagctcgtttagctgacacaggcaactatacctgcgtggccaagaacatagtggctcgccgtcgtagctctcc tgccgctgtgattgtctatgtgaatggaggctggtcgacgtggacggactggtcagcctgcagcaccagctgtggacggg gctggcagaagcggagccggagctgcaccaacccagcgccactcaacgggggggccttctgtgagggccagaatgtgcag aaaagttcctgcgccaccctgtgcccagtacctggtggttggtcagcctggagtttgtggtcggtgtgtggtgctgactg tacacattggcgcagccgtgaatgctctgatccggtgccccgtaatggtggggatgagtgccaggggcctgaactggaaa cccgcaactgcaccagtgaactgtgtacgcatgaaactggtggctctgaggatgtggccctgtatgttggcttgattgct gtagccgtctgcttggtattgctgcttctagtggtaacccttgtctactgccggaagaaggaagggttggattcagatgt agctgactcttctattctcactgctggcttccagccagttggcatcaagcccaccaaagcagataattcccatctattga caatccagcctgatctgagcaccactaccatgacctaccaaggctcactgtgtccacgccaggatgggcctggcaaattc cagattggcaatgggcacctgcttagccccctgggcagtggacgccacactcttcaccacagctctcccagtgctgatcc ggtagactttgtctcacgattctctacccagagtttcttccgctctttacccaggggtgctgccaacatggcgtatggaa cattcaacttcttgggtggacgtttaatgatacccaacacaggtgtcagcttgctcatcccacccgatgccatcccacgg gggaaaatctatgaaatctacctaactctgcacaagcaggaggatgtgaggcttccgctggcaggctgccagactttact gagccccattgttagttgtggccctccgggggtgctgctcaccagacctgttatcctagccatagatcactgtgtggagc caaaccctgagacctggaacctgcgcctcaagaagcagtcctgtgagggaacatgggaggacgtactgcagttgggagac ccaggatcttctgaactgttccattgccagttggaaccccaagcttgctacatcttcactgagcaactgggccgctttgc gttggtgggagaatcactcagcatggctgcttcaaagcgcctgaaactggttctctttgcacctacaacttgtactgggc tggaatatgatgtccgtgtatattgcctcagtgacacccgtgatgcacttaaggaagtggtgcaaatagagaagcaaatg ggtggacagctgatcggtgcaccgcgaatcttgcacttcaaggacagttatcacaatctgcgtctctccatccatgatgt gcccagctcactgtggaagagcaagcttctagtcagctaccaggaaattcccttctaccatctttggagtgggctgcagc cctacctacactgtaccttcacactggagcgactcagcaccaacacatgccaattggcatgcaaaatttggatctggcag gtggagggtgacgggcagagcttcaatattgacttcaacattgccagggatgcacggttttcggactggctgcccccaga caatgaggctggctctcctgccctggtgggccccagtgccttcaagattccttttcttatccgccagaaaatcataagta gtctggatgccccggtggcccgtggggctgactggagagcattagcccaaaagctgcaccttgacagccatctcagctac tttgcttcaaaaccaagcccaacagccatgatcttgaacttatgggaggcacgtcacttccccaatggaaacctcaacca gctggctgctgctgtggctgaagtgggcaagcaggacagctcccttttcatggtttcagaagctgagtgctaaagcccta ggcagggacaaagcaggcctcagcctggagatgatacggggcacctccatttcaagggtcacagcatctgtacttgtcct gctttgaatatgcctgtgtgccctatctgatccttgtgccaaattcagccagaaggcaaacacactgggctgagtctcca gaagccatggaaaaggctaccaaatccctactctgctgctaccaaagcagttctggaactggttggggcaggtctatttt ttctaccaagtaggctggcaagcaagtctgatatgctgacatcgggcttggataattattctagagctttcttctactct agcatggaaagcaaaaggaaaggaaatggttagcacagaagtcattgtgagtgaccaggataaaaggtaagctttgctgt gaagcggagtcatctgtgtccggtccactgcgtcccccaggaagccctttgccataataaagttgaaaaaaaagagggta gctcaggatagttccagagccatttttgtaaatgtttgctccagcccaagaggtatctgacactcagtcagagaaggcag ccgaagagttggtggcttgcagacacctggagacccatgggacaaggaagaaacagaaggtcaaccaaaggatgagggcc ttgctctcctggtgactgtatctgtgcctccttagtccttgcccagtgtatatgcaagggatttgtgcgtgtgcgtggaa gtctgatctgtgcagtgaacgtgtgctggaccaggcaggtctatgccgtattgtgtaaagatcgttttttattctgtatt caagtgcattcaagtatttacacttggccttatgtacatatcagcgtctcgcacagggttttggcgggcatgaacgtaaa taaattatatatatatatattgctac |
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| Transcript ID | habu1_s1827_g06793.t2 |
| Definition | - |
>habu1_s1827_g06793.t2 gcggcattaaaaaggttgagaaccactggactagagaaaggaggccgtgtggatcaggcctctttacagcgttccttcca aggatgaaaccagatgttaagtggttacgaagtgctccaacttggcctgaatattgggatgaagaattccagaagattgc ttcaagccgcaaaatgattaatgtgtgtaaaaatgagcagcttcacataaaactcttcatggttgatttatcatcccacc cctttgctgcttttggcttcagtcagactagtgggctcatctccagcgctgccagccaggatctcctgccagatcagttt agtccagtttgcatcaaagggaggccactggaagttaatgcagccaacccagagaaggatggagatagaaaaactattac aaaaggtttgccaggatgcttagcagttcaacatgcagttgatcaaagatcactaaagagctgctgtcattttgatgata ttgaaaaagatgctcaacaaagtgccacggtgcccattcctgtgcctggctctggctctgacctgctcccccacttcctg ctagaacctgaggatgtttatattgtcaaaaacaaacctgtgacattgacgtgcaaggccctgcctgccacccagattta cttcaaatgcaatggtgaatgggtgcaccaaggtgaccacatcatacagcgcagcaaggataagagcactggcctgcccc tcatggaggtacggatagatatctcaaggcagcaggtggagaagatctttggcttggaagagtactggtgtcagtgtgtg gcctggagttcttccggcaccaccaaaagccagaaggcctttgtgcgcattgcgtacttgaggaagaattttgagcagga gccagtggccaaagaagtctccattgagcagggaattgtgctgccttgccgccctccagaggggattccacctgctgaag tggagtggctgcgcaacgaagaacttgtggacccaaccctggaccccaattactacattacactggaacatagcttggtg gtgaaacaagctcgtttagctgacacaggcaactatacctgcgtggccaagaacatagtggctcgccgtcgtagctctcc tgccgctgtgattgtctatgtacctggtggttggtcagcctggagtttgtggtcggtgtgtggtgctgactgtacacatt ggcgcagccgtgaatgctctgatccggtgccccgtaatggtggggatgagtgccaggggcctgaactggaaacccgcaac tgcaccagtgaactgtgtacgcatgaaactggtggctctgaggatgtggccctgtatgttggcttgattgctgtagccgt ctgcttggtattgctgcttctagtggtaacccttgtctactgccggaagaaggaagggttggattcagatgtagctgact cttctattctcactgctggcttccagccagttggcatcaagcccaccaaagcagataattcccatctattgacaatccag cctgatctgagcaccactaccatgacctaccaaggctcactgtgtccacgccaggatgggcctggcaaattccagattgg caatgggcacctgcttagccccctgggcagtggacgccacactcttcaccacagctctcccagtgctgatccggtagact ttgtctcacgattctctacccagagtttcttccgctctttacccaggggtgctgccaacatggcgtatggaacattcaac ttcttgggtggacgtttaatgatacccaacacaggtgtcagcttgctcatcccacccgatgccatcccacgggggaaaat ctatgaaatctacctaactctgcacaagcaggaggatgtgaggcttccgctggcaggctgccagactttactgagcccca ttgttagttgtggccctccgggggtgctgctcaccagacctgttatcctagccatagatcactgtgtggagccaaaccct gagacctggaacctgcgcctcaagaagcagtcctgtgagggaacatgggaggacgtactgcagttgggagacccaggatc ttctgaactgttccattgccagttggaaccccaagcttgctacatcttcactgagcaactgggccgctttgcgttggtgg gagaatcactcagcatggctgcttcaaagcgcctgaaactggttctctttgcacctacaacttgtactgggctggaatat gatgtccgtgtatattgcctcagtgacacccgtgatgcacttaaggaagtggtgcaaatagagaagcaaatgggtggaca gctgatcggtgcaccgcgaatcttgcacttcaaggacagttatcacaatctgcgtctctccatccatgatgtgcccagct cactgtggaagagcaagcttctagtcagctaccaggaaattcccttctaccatctttggagtgggctgcagccctaccta cactgtaccttcacactggagcgactcagcaccaacacatgccaattggcatgcaaaatttggatctggcaggtggaggg tgacgggcagagcttcaatattgacttcaacattgccagggatgcacggttttcggactggctgcccccagacaatgagg ctggctctcctgccctggtgggccccagtgccttcaagattccttttcttatccgccagaaaatcataagtagtctggat gccccggtggcccgtggggctgactggagagcattagcccaaaagctgcaccttgacagccatctcagctactttgcttc aaaaccaagcccaacagccatgatcttgaacttatgggaggcacgtcacttccccaatggaaacctcaaccagctggctg ctgctgtggctgaagtgggcaagcaggacagctcccttttcatggtttcagaagctgagtgctaaagccctaggcaggga caaagcaggcctcagcctggagatgatacggggcacctccatttcaagggtcacagcatctgtacttgtcctgctttgaa tatgcctgtgtgccctatctgatccttgtgccaaattcagccagaaggcaaacacactgggctgagtctccagaagccat ggaaaaggctaccaaatccctactctgctgctaccaaagcagttctggaactggttggggcaggtctattttttctacca agtaggctggcaagcaagtctgatatgctgacatcgggcttggataattattctagagctttcttctactctagcatgga aagcaaaaggaaaggaaatggttagcacagaagtcattgtgagtgaccaggataaaaggtaagctttgctgtgaagcgga gtcatctgtgtccggtccactgcgtcccccaggaagccctttgccataataaagttgaaaaaaaagagggtagctcagga tagttccagagccatttttgtaaatgtttgctccagcccaagaggtatctgacactcagtcagagaaggcagccgaagag ttggtggcttgcagacacctggagacccatgggacaaggaagaaacagaaggtcaaccaaaggatgagggccttgctctc ctggtgactgtatctgtgcctccttagtccttgcccagtgtatatgcaagggatttgtgcgtgtgcgtggaagtctgatc tgtgcagtgaacgtgtgctggaccaggcaggtctatgccgtattgtgtaaagatcgttttttattctgtattcaagtgca ttcaagtatttacacttggccttatgtacatatcagcgtctcgcacagggttttggcgggcatgaacgtaaataaattat atatatatatattgctac |
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Protein
| Protein ID | habu1_s1827_g06793.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06793.t1 MKPDVKWLRSAPTWPEYWDEEFQKIASSRKMINVCKNEQLHIKLFMVDLSSHPFAAFGFSQTSGLISSAASQDLLPDQFS PVCIKGRPLEVNAANPEKDGDRKTITKGLPGCLAVQHAVDQRSLKSCCHFDDIEKDAQQSATVPIPVPGSGSDLLPHFLL EPEDVYIVKNKPVTLTCKALPATQIYFKCNGEWVHQGDHIIQRSKDKSTGLPLMEVRIDISRQQVEKIFGLEEYWCQCVA WSSSGTTKSQKAFVRIAYLRKNFEQEPVAKEVSIEQGIVLPCRPPEGIPPAEVEWLRNEELVDPTLDPNYYITLEHSLVV KQARLADTGNYTCVAKNIVARRRSSPAAVIVYVNGGWSTWTDWSACSTSCGRGWQKRSRSCTNPAPLNGGAFCEGQNVQK SSCATLCPVPGGWSAWSLWSVCGADCTHWRSRECSDPVPRNGGDECQGPELETRNCTSELCTHETGGSEDVALYVGLIAV AVCLVLLLLVVTLVYCRKKEGLDSDVADSSILTAGFQPVGIKPTKADNSHLLTIQPDLSTTTMTYQGSLCPRQDGPGKFQ IGNGHLLSPLGSGRHTLHHSSPSADPVDFVSRFSTQSFFRSLPRGAANMAYGTFNFLGGRLMIPNTGVSLLIPPDAIPRG KIYEIYLTLHKQEDVRLPLAGCQTLLSPIVSCGPPGVLLTRPVILAIDHCVEPNPETWNLRLKKQSCEGTWEDVLQLGDP GSSELFHCQLEPQACYIFTEQLGRFALVGESLSMAASKRLKLVLFAPTTCTGLEYDVRVYCLSDTRDALKEVVQIEKQMG GQLIGAPRILHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYHLWSGLQPYLHCTFTLERLSTNTCQLACKIWIWQV EGDGQSFNIDFNIARDARFSDWLPPDNEAGSPALVGPSAFKIPFLIRQKIISSLDAPVARGADWRALAQKLHLDSHLSYF ASKPSPTAMILNLWEARHFPNGNLNQLAAAVAEVGKQDSSLFMVSEAEC |
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| Protein ID | habu1_s1827_g06793.t2 |
| Definition | - |
>habu1_s1827_g06793.t2 MKPDVKWLRSAPTWPEYWDEEFQKIASSRKMINVCKNEQLHIKLFMVDLSSHPFAAFGFSQTSGLISSAASQDLLPDQFS PVCIKGRPLEVNAANPEKDGDRKTITKGLPGCLAVQHAVDQRSLKSCCHFDDIEKDAQQSATVPIPVPGSGSDLLPHFLL EPEDVYIVKNKPVTLTCKALPATQIYFKCNGEWVHQGDHIIQRSKDKSTGLPLMEVRIDISRQQVEKIFGLEEYWCQCVA WSSSGTTKSQKAFVRIAYLRKNFEQEPVAKEVSIEQGIVLPCRPPEGIPPAEVEWLRNEELVDPTLDPNYYITLEHSLVV KQARLADTGNYTCVAKNIVARRRSSPAAVIVYVPGGWSAWSLWSVCGADCTHWRSRECSDPVPRNGGDECQGPELETRNC TSELCTHETGGSEDVALYVGLIAVAVCLVLLLLVVTLVYCRKKEGLDSDVADSSILTAGFQPVGIKPTKADNSHLLTIQP DLSTTTMTYQGSLCPRQDGPGKFQIGNGHLLSPLGSGRHTLHHSSPSADPVDFVSRFSTQSFFRSLPRGAANMAYGTFNF LGGRLMIPNTGVSLLIPPDAIPRGKIYEIYLTLHKQEDVRLPLAGCQTLLSPIVSCGPPGVLLTRPVILAIDHCVEPNPE TWNLRLKKQSCEGTWEDVLQLGDPGSSELFHCQLEPQACYIFTEQLGRFALVGESLSMAASKRLKLVLFAPTTCTGLEYD VRVYCLSDTRDALKEVVQIEKQMGGQLIGAPRILHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYHLWSGLQPYLH CTFTLERLSTNTCQLACKIWIWQVEGDGQSFNIDFNIARDARFSDWLPPDNEAGSPALVGPSAFKIPFLIRQKIISSLDA PVARGADWRALAQKLHLDSHLSYFASKPSPTAMILNLWEARHFPNGNLNQLAAAVAEVGKQDSSLFMVSEAEC |
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