Gene
| Gene Model ID | habu1_s1864_g06890 |
|---|---|
| Locus | habu1_scaffold1864 : 60705 ... 74405 : - |
| To GenomeBrowser | habu1_scaffold1864:60705..74405 |
| Genes list of scaffold | habu1_scaffold1864 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-related protein rap-1a-like partial | GO:0005525 GO:0007264 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1864_g06890.t1 | 1 | 1 | Ras | 1 | 56 | 8.4e-16 | 57.7 | 1.3e-19 | 9.9e-16 | 57.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1864_g06890.t1 | gi|612000055|ref|XP_007485204.1| | PREDICTED: ras-related protein Rap-1A [Monodelphis domestica] | 0.0 |
| habu1_s1864_g06890.t1 | gi|511900601|ref|XP_004769833.1| | 0.0 | |
| habu1_s1864_g06890.t1 | gi|512892670|ref|XP_004897347.1| | 0.0 | |
| habu1_s1864_g06890.t1 | gi|593710336|ref|XP_007101746.1| | PREDICTED: ras-related protein Rap-1A isoform X2 [Physeter catodon] | 0.0 |
| habu1_s1864_g06890.t1 | gi|74220172|dbj|BAE31271.1| | unnamed protein product [Mus musculus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 27.4 |
| Venom grand-1 | 16.3 |
| Pit, infrared sensing | 28.2 |
| Nose | 21.9 |
| Brain-1 | 16.0 |
| Eye | 20.5 |
| fetal fibroblast | 78.6 |
| venom gland-2 | 27.3 |
| Brain-2 | 20.4 |
| Spleen | 36.2 |
| Lung | 32.3 |
| Liver | 34.4 |
| Kidney | 22.4 |
| Pancreas | 12.3 |
| Small intestine | 19.3 |
| Large intestine | 33.4 |
| Stomach | 34.0 |
| heart | 80.5 |
| ovary | 35.1 |
| cheek muscle | 80.4 |
Transcript
| Transcript ID | habu1_s1864_g06890.t1 |
|---|---|
| Definition | - |
>habu1_s1864_g06890.t1 catgcacaaatggggccgctaccaccgggcgagtgcgcatggcccgtttgcacatgtgtgaataaggcagctagtgcctt aacggtgtgtgtggacccatttgcgtgcatgcgcatgcaccaatttggaagttgctctccttccctccgggccgccagaa aggttggagatctctgtgctaaagcactgaatttttaatgcttcagtggtgtgtcttatccctttgcttttcagcaagtg gaagtagactgccaacaatgtatgcttgaaatcctcgatacagcagggacagttcccatgattctggttggcaataaatg tgatctggaagatgaacgagtagttggcaaagaacagggacagaatttagcaagacagtggtgtaactgtgcctttctag agtcatctgcaaagtctaaaatcaatgttaatgagatcttttatgatcttgtcagacagataaataggaaaacaccagtg gaaaagaagaagcctaaaaagaagtcatgtctgctgctttagacccacagcatgcagcagctctgagccaggatcacagg aatgaagaactgttgcctaatttggaaagtgccagcattccagaaattcaaaaaagctataccacaaattgacatcatat ctgaagaggcttctgtttttatatattatgtgaagaaattagatcttacaatggtttgcacaaaggtccctgaggaaaaa aaaataagaaaataaaattgctctgtgtatatctcttggaattaaagacaatagtacttctcttttgcaatagcagttaa caaatgtgataataaatataattgactttagttgtatg |
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Protein
| Protein ID | habu1_s1864_g06890.t1 |
|---|---|
| Definition | - |
>habu1_s1864_g06890.t1 MILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL |
|