Gene
| Gene Model ID | habu1_s1864_g06892 |
|---|---|
| Locus | habu1_scaffold1864 : 200629 ... 213415 : - |
| To GenomeBrowser | habu1_scaffold1864:200629..213415 |
| Genes list of scaffold | habu1_scaffold1864 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| atp synthase f complex subunit mitochondrial | EC:3.6.1.3 GO:0000276 GO:0005634 GO:0015078 GO:0015986 GO:0016887 GO:0021762 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1864_g06892.t2 | 2 | 1 | Mt_ATP-synt_B | 85 | 130 | 8.9e-37 | 126.0 | 1.4e-15 | 2.0e-11 | 43.5 |
| habu1_s1864_g06892.t2 | 2 | 2 | Mt_ATP-synt_B | 164 | 286 | 8.9e-37 | 126.0 | 2.6e-28 | 3.9e-24 | 84.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1864_g06892.t2 | gi|527249920|ref|XP_005143274.1| | PREDICTED: ATP synthase subunit b, mitochondrial [Melopsittacus undulatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 65.5 |
| Venom grand-1 | 83.5 |
| Pit, infrared sensing | 71.4 |
| Nose | 72.6 |
| Brain-1 | 58.2 |
| Eye | 60.7 |
| fetal fibroblast | 195.6 |
| venom gland-2 | 136.7 |
| Brain-2 | 74.0 |
| Spleen | 47.1 |
| Lung | 35.0 |
| Liver | 104.0 |
| Kidney | 105.6 |
| Pancreas | 81.8 |
| Small intestine | 83.5 |
| Large intestine | 66.4 |
| Stomach | 144.1 |
| heart | 338.4 |
| ovary | 110.5 |
| cheek muscle | 295.6 |
Transcript
| Transcript ID | habu1_s1864_g06892.t1 |
|---|---|
| Definition | - |
>habu1_s1864_g06892.t1 ggccattttagtgttgcggccgggggtcatagggacgtcggccagtgctggggaaggcacgatgctctctcggttggcgt tgcgtgtcctggccccagccggcctgaagagctcagtggctctaccctccctgtcatcgggcgtaattcatgcatcaaga tcacttcacacaagtcaacagcacttggctcctgtgccatctcttccagagaaaggaggaaaagttcgccatggaataat ccctgaagagtttttccagtttttatatcctaaaacaggagtcacaggtccatatatgcttgcaactggattgacactct acttcctgtctaaggaaatttatataataaatcatgaaacaataactggtgttcttattgtgggtttactaatctatgga attaagaagtatggtcctgttgtagcagcttttcttgacaaaacaatggacgaggaacatgctgcttacgaggacttaaa aagtgcttatataaatagatgccagaacggaattgaggaggaaaaaaaagagcaatggagacttgagggtcgccactatc tctttgatgccaagcggaacaatattgctatgatcctggaggccaactatagagaaaggcttctcattgcatccagggaa gtgaagaagaggctagattatcaaattgcattacagcagctcaagcggcgcctggaacgagatcatatgatcaattgggt agaacaaagtgtttggcagagtgttactgcccaacaggagaaggagaatatagctaaatgcctcttggacctgaaagcac tgtcaaagtctgcccaaccatctctctaagtcgagcattaagttgtaacttccagaattgtacaatttctatccttaatt aaaacatgtgtatcctggttttgtt |
|
| Transcript ID | habu1_s1864_g06892.t2 |
| Definition | - |
>habu1_s1864_g06892.t2 ggccattttagtgttgcggccgggggtcatagggacgtcggccagtgctggggaaggcacgatgctctctcggttggcgt tgcgtgtcctggccccagccggcctgaagagctcagtggctctaccctccctgtcatcgggcgtaattcatgcatcaaga tcacttcacacaagtcaacagcacttggctcctgtgccatctcttccagagaaaggaggaaaagttcgccatggaataat ccctgaagagtttttccagtttttatatcctaaaacaggagtcacaggtccatatatgcttgcaactggattgacactct acttcctgtctaaggaaatttatataataaatcatgaaacaataactggtgttcttattgtgggtttactaatctatgga attaagaagtatggtcctgttgtagcagcttttcttgacaaaacaatggactgcctagatcccagacaagcaggaggaga aagaaggggagaaggccagctgggaatggaggtggcagaatctacaatggctgaaagggcagaagccagcagttggagga agaaaatggttaaggaggaacatgctgcttacgaggacttaaaaagtgcttatataaatagatgccagaacggaattgag gaggaaaaaaaagagcaatggagacttgagggtcgccactatctctttgatgccaagcggaacaatattgctatgatcct ggaggccaactatagagaaaggcttctcattgcatccagggaagtgaagaagaggctagattatcaaattgcattacagc agctcaagcggcgcctggaacgagatcatatgatcaattgggtagaacaaagtgtttggcagagtgttactgcccaacag gagaaggagaatatagctaaatgcctcttggacctgaaagcactgtcaaagtctgcccaaccatctctctaagtcgagca ttaagttgtaacttccagaattgtacaatttctatccttaattaaaacatgtgtatcctggttttgtt |
|
Protein
| Protein ID | habu1_s1864_g06892.t1 |
|---|---|
| Definition | - |
>habu1_s1864_g06892.t1 MLSRLALRVLAPAGLKSSVALPSLSSGVIHASRSLHTSQQHLAPVPSLPEKGGKVRHGIIPEEFFQFLYPKTGVTGPYML ATGLTLYFLSKEIYIINHETITGVLIVGLLIYGIKKYGPVVAAFLDKTMDEEHAAYEDLKSAYINRCQNGIEEEKKEQWR LEGRHYLFDAKRNNIAMILEANYRERLLIASREVKKRLDYQIALQQLKRRLERDHMINWVEQSVWQSVTAQQEKENIAKC LLDLKALSKSAQPSL |
|
| Protein ID | habu1_s1864_g06892.t2 |
| Definition | - |
>habu1_s1864_g06892.t2 MLSRLALRVLAPAGLKSSVALPSLSSGVIHASRSLHTSQQHLAPVPSLPEKGGKVRHGIIPEEFFQFLYPKTGVTGPYML ATGLTLYFLSKEIYIINHETITGVLIVGLLIYGIKKYGPVVAAFLDKTMDCLDPRQAGGERRGEGQLGMEVAESTMAERA EASSWRKKMVKEEHAAYEDLKSAYINRCQNGIEEEKKEQWRLEGRHYLFDAKRNNIAMILEANYRERLLIASREVKKRLD YQIALQQLKRRLERDHMINWVEQSVWQSVTAQQEKENIAKCLLDLKALSKSAQPSL |
|