Gene
| Gene Model ID | habu1_s1864_g06893 |
|---|---|
| Locus | habu1_scaffold1864 : 214326 ... 225764 : + |
| To GenomeBrowser | habu1_scaffold1864:214326..225764 |
| Genes list of scaffold | habu1_scaffold1864 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| methylosome protein 50 | GO:0005634 GO:0005667 GO:0005794 GO:0005829 GO:0006357 GO:0008284 GO:0030374 GO:0034709 GO:0045941 GO:0060528 GO:0060770 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1864_g06893.t1 | 2 | 1 | WD40 | 125 | 156 | 1.3e-17 | 62.9 | 2.3e-08 | 0.00011 | 21.9 |
| habu1_s1864_g06893.t1 | 2 | 2 | WD40 | 162 | 199 | 1.3e-17 | 62.9 | 2.3e-08 | 0.00011 | 21.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1864_g06893.t1 | gi|602637479|ref|XP_007425585.1| | PREDICTED: methylosome protein 50 [Python bivittatus] | 0.0 |
| habu1_s1864_g06893.t1 | gi|530633140|ref|XP_005303624.1| | PREDICTED: methylosome protein 50 [Chrysemys picta bellii] | 0.0 |
| habu1_s1864_g06893.t1 | gi|527249922|ref|XP_005143275.1| | PREDICTED: methylosome protein 50 [Melopsittacus undulatus] | 0.0 |
| habu1_s1864_g06893.t1 | gi|71895697|ref|NP_001026087.1| | methylosome protein 50 [Gallus gallus] | 0.0 |
| habu1_s1864_g06893.t1 | gi|543372240|ref|XP_005529341.1| | PREDICTED: methylosome protein 50 [Pseudopodoces humilis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.0 |
| Venom grand-1 | 8.0 |
| Pit, infrared sensing | 8.4 |
| Nose | 8.3 |
| Brain-1 | 4.8 |
| Eye | 6.1 |
| fetal fibroblast | 34.8 |
| venom gland-2 | 12.4 |
| Brain-2 | 5.2 |
| Spleen | 7.8 |
| Lung | 5.0 |
| Liver | 9.7 |
| Kidney | 7.1 |
| Pancreas | 12.3 |
| Small intestine | 4.2 |
| Large intestine | 5.0 |
| Stomach | 6.5 |
| heart | 4.7 |
| ovary | 73.4 |
| cheek muscle | 11.7 |
Transcript
| Transcript ID | habu1_s1864_g06893.t1 |
|---|---|
| Definition | - |
>habu1_s1864_g06893.t1 gcttggagtttgctggatcgcatttcactgctgcacctatggaagaagccaaaccgagtcccgggcatggagtggaggca gaaaccggacccgaatggaatattccgcccaacgctcccgcctgcatggagcgccacctggacggggcccattaccgatc agatggttctctgctcctgggagcatccagtttgagtggacgttgctgggttggttccatttgggtattcaaagatacat caagagctcctaatgaaggattttgctctgcgggtgttcaaactgaagcaggaatagcagatctgaagtgggtagcagac aaaggaatcttggtagcgtcagattcaggtgctctggaattttgggagctggatgagaatgagactctgatagtgagcaa attctgtaaatatgagcatgatgacattgtgactactgtgagtgttgtttccaacaacacacaggccatcagtggcagca aagatttcagtgtgaagatctgggatattcctcaacaaacagtactcggcacatataaagctcattctggtcaagtggct tgtgtggcctcctgccctggaaaggatacagtgttcctgtcctgtgctgaggacagcagggttttactctgggataccag atctccaaaaccagcatctcgaattgcctgcaatgcctcttgtaatctttctacctcactggcatggcatccacatcaaa acgacacttttgttttgggtgacgaaagtgggatgattgtacttatagacacaaagaatccagataccatcatcagttca actgtgcattcccgtagtatcacaggatttgctttttctgcacacagttcacctctgctggcttctatcagtgaagattg ttctgtcgttgtccttgactccagtttttcagaagtttttaggaatcggtctcatcgagattttgtaacaggtttatcat ggtctcccttgaataaaaactcattgacaacagttggatgggaccatcaagttctacatcacacaatcccaatgcagaat aaccaccgttctgggaaaaatgatatcactgcatagtttgtacttccttggtcctttcctctggaatagctctttttgtg gggagaaataatggggctaaataatgtgccatgcagcaaagaatggtcctataacaatttcacaggagatgccttccagc tgcttattacagccagtcaaattctgcaagaaacggaagttttatagtgatttggacaataatacaaatcctaaaagaat tggtttcatttaatttttgtgggcaatactttatacaacctcgagagtgttgcagatgcatttttgtgtttgtgtgtgtg tattttttactgtggaataaatcttacaatgctttctggactt |
|
Protein
| Protein ID | habu1_s1864_g06893.t1 |
|---|---|
| Definition | - |
>habu1_s1864_g06893.t1 MEEAKPSPGHGVEAETGPEWNIPPNAPACMERHLDGAHYRSDGSLLLGASSLSGRCWVGSIWVFKDTSRAPNEGFCSAGV QTEAGIADLKWVADKGILVASDSGALEFWELDENETLIVSKFCKYEHDDIVTTVSVVSNNTQAISGSKDFSVKIWDIPQQ TVLGTYKAHSGQVACVASCPGKDTVFLSCAEDSRVLLWDTRSPKPASRIACNASCNLSTSLAWHPHQNDTFVLGDESGMI VLIDTKNPDTIISSTVHSRSITGFAFSAHSSPLLASISEDCSVVVLDSSFSEVFRNRSHRDFVTGLSWSPLNKNSLTTVG WDHQVLHHTIPMQNNHRSGKNDITA |
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