Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1864_g06898
Locus habu1_scaffold1864 : 357926 ... 382555 : -
To GenomeBrowser habu1_scaffold1864:357926..382555
Genes list of scaffold habu1_scaffold1864

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 1.7
Venom grand-1 2.4
Pit, infrared sensing 2.0
Nose 3.3
Brain-1 1.0
Eye 1.2
fetal fibroblast 1.6
venom gland-2 3.4
Brain-2 0.6
Spleen 39.3
Lung 2.6
Liver 2.6
Kidney 1.4
Pancreas 2.6
Small intestine 4.7
Large intestine 5.2
Stomach 1.5
heart 0.9
ovary 2.2
cheek muscle 1.5

Transcript
Transcript IDhabu1_s1864_g06898.t1
Definition-
>habu1_s1864_g06898.t1
gagcaaggcagagagagagagagagagagagagagagagagcaataccagtactgagctcagaccatttccagttcttcg
aaaaaggaatagtgatttttggtcggttacagtatgttaacagttgataactaagctaatgttttggatcttgatgaact
tcaatcaggcctaccactgagaagcaaaggaaggtgagtctccactatatttggaaagtaggatgatcactggattttcc
aagtctcctggccagcaaggcccccagcatgagagttatgaagaaaaatatgagcgccggtgcaagaagcatgaaagcct
gctcaggagaaacaacaggaccacatgccgtctcacaagcaaatgccagagcacagaagccaaggaatcagctcagagcc
ctcgacaaaaggaattcttccgacgaaggaatttaacaattgaagaacttgggaggacaaaaatgatgttgcctcctggc
aagagacgatctttatttcctgtaaactgttctgacagtctagggcaaataccacctcagaactatttgaactgtttgtc
aaatatccagcctcataccaaatatatacagcataacttcaataatatattccctcttagcaaatcatctcaagccatgc
tcgctgtgaatgttcccaaaaactgtaaaggtacacaaaccacaaaagaactgagttctgaaaagaaaaactcctgtcag
caaacagattgtggaacagcagttttagataaggaaattattcaactttctaactacctcaatgaggcgctacatcgaga
actaatattgaagcagaaaatggtgattttacaagagcttctagccatgttgctagaagcagcagaaaaatcttggaagg
gtcagtttaatgaagacaaactcaaatgcaggctgagcatgctggagaatcaattgcaaatatgtacccagagttattca
aagaggggcttaaaaaggattctcctggagatggaagatcaaaagcagaattatgaacagaaagtaaaagaatctcttca
gaaactgcttgaagagaaaatgcaggcacaaaagcaatttcaaactgcccagagagccctaactgttgtcgagggtgact
gtagcctctggaaagatcaacttaacaccttaaaaaaagattggagtcaactaactgaccagcacactgaagtcaaaaac
aagctgcatgtcttggagaacaaactgcagtggtcagacacccaaaattctcaacttcaacaagccctaaaagacatgga
gaatgagtgtgcaagtctgtattcaagaattgataatatgcaagaagaaaagagactcatcatggaatatcttggtgaaa
tggaaggcaagctgcaaactgaagcaaggcaaaaattcatattggaggcaacaattgaacatcttcaaaagcaaactgtc
gcagtacccaatgaagtcctcagttgggtgacaactaagcagaatgtccaattagaggaggaagagacagagaaagagag
tagcctgcgagaagaactgcaaaaaaggacatctcagcttgcagctaagaaaaaagagtgcactgatctctgtcataaac
tagagatcctgaacaatgagtatagcagttgccttgccaatttacaacagtgtcgtgatgaattcaagtactctcaaaac
aagcaagcccagagaaagcatgatcattggattcctatcataatggtaataatggtaacagctctggtatcttatttaag
caactttacaccttgaacataccttgtcttatttgcctactactgactgcactatagcagtctaaattatctcaaatggt
tagtatttcaattttaaaatgcttgtaaaattaactgcatattgtactgaaggagtttgtctgcttggttttgtgtattg
cttagtttttgtactgttattattaaaaccaaagcaacaaatattgattgtatgtctatccatataccactgatctctat
atccattgacacaatcaccattcttacagtttcaaaaatcttaagttcctcaattcacttaagtattacttgaccatact
ggaattgaaatcattgcctattttagctggagaattcttttttcctggaatttggaatagattgttcaataatatattct
ggaaaaataggctaacctgaaatagattctgggaaatttaagcatgaaggatatcctgcatgctgctgaaagtgcacatt
tttaaaaaaacactgacataattgcttaaactaagctgccaaattgcttttaaacaaatcaatagaatactgtggagaag
caccattatttatctatgaattgtgattcatatttacaaggccactgctgatagaacaaccacctcatttgcaatgcaga
gattagcaaattctttctgagctttaaaagcatccttgagtttttcacaccatgtgctgaggttcattttcatgtctgga
tacaagagttctgggatactgaaagaataaaacctaactctgaaatcactgtt
Transcript IDhabu1_s1864_g06898.t2
Definition-
>habu1_s1864_g06898.t2
gagcaaggcagagagagagagagagagagagagagagagagcaataccagtactgagctcagaccatttccagttcttcg
aaaaaggaatagtgatttttggtcggttacagtatgttaacagttgataactaagctaatgttttggatcttgatgaact
tcaatcaggcctaccactgagaagcaaagaatttcttaaaggaagggcctttcaattagctgcactataaggacgctggc
atctgagcaaggaaggtgagtctccactatatttggaaagtaggatgatcactggattttccaagtctcctggccagcaa
ggcccccagcatgagagttatgaagaaaaatatgagcgccggtgcaagaagcatgaaagcctgctcaggagaaacaacag
gaccacatgccgtctcacaagcaaatgccagagcacagaagccaaggaatcagctcagagccctcgacaaaaggaattct
tccgacgaaggaatttaacaattgaagaacttgggaggacaaaaatgatgttgcctcctggcaagagacgatctttattt
cctgtaaactgttctgacagtctagggcaaataccacctcagaactatttgaactgtttgtcaaatatccagcctcatac
caaatatatacagcataacttcaataatatattccctcttagcaaatcatctcaagccatgctcgctgtgaatgttccca
aaaactgtaaaggtacacaaaccacaaaagaactgagttctgaaaagaaaaactcctgtcagcaaacagattgtggaaca
gcagttttagataaggaaattattcaactttctaactacctcaatgaggcgctacatcgagaactaatattgaagcagaa
aatggtgattttacaagagcttctagccatgttgctagaagcagcagaaaaatcttggaagggtcagtttaatgaagaca
aactcaaatgcaggctgagcatgctggagaatcaattgcaaatatgtacccagagttattcaaagaggggcttaaaaagg
attctcctggagatggaagatcaaaagcagaattatgaacagaaagtaaaagaatctcttcagaaactgcttgaagagaa
aatgcaggcacaaaagcaatttcaaactgcccagagagccctaactgttgtcgagggtgactgtagcctctggaaagatc
aacttaacaccttaaaaaaagattggagtcaactaactgaccagcacactgaagtcaaaaacaagctgcatgtcttggag
aacaaactgcagtggtcagacacccaaaattctcaacttcaacaagccctaaaagacatggagaatgagtgtgcaagtct
gtattcaagaattgataatatgcaagaagaaaagagactcatcatggaatatcttggtgaaatggaaggcaagctgcaaa
ctgaagcaaggcaaaaattcatattggaggcaacaattgaacatcttcaaaagcaaactgtcgcagtacccaatgaagtc
ctcagttgggtgacaactaagcagaatgtccaattagaggaggaagagacagagaaagagagtagcctgcgagaagaact
gcaaaaaaggacatctcagcttgcagctaagaaaaaagagtgcactgatctctgtcataaactagagatcctgaacaatg
agtatagcagttgccttgccaatttacaacagtgtcgtgatgaattcaagtactctcaaaacaagcaagcccagagaaag
catgatcattggattcctatcataatggtaataatggtaacagctctggtatcttatttaagcaactttacaccttgaac
ataccttgtcttatttgcctactactgactgcactatagcagtctaaattatctcaaatggttagtatttcaattttaaa
atgcttgtaaaattaactgcatattgtactgaaggagtttgtctgcttggttttgtgtattgcttagtttttgtactgtt
attattaaaaccaaagcaacaaatattgattgtatgtctatccatataccactgatctctatatccattgacacaatcac
cattcttacagtttcaaaaatcttaagttcctcaattcacttaagtattacttgaccatactggaattgaaatcattgcc
tattttagctggagaattcttttttcctggaatttggaatagattgttcaataatatattctggaaaaataggctaacct
gaaatagattctgggaaatttaagcatgaaggatatcctgcatgctgctgaaagtgcacatttttaaaaaaacactgaca
taattgcttaaactaagctgccaaattgcttttaaacaaatcaatagaatactgtggagaagcaccattatttatctatg
aattgtgattcatatttacaaggccactgctgatagaacaaccacctcatttgcaatgcagagattagcaaattctttct
gagctttaaaagcatccttgagtttttcacaccatgtgctgaggttcattttcatgtctggatacaagagttctgggata
ctgaaagaataaaacctaactctgaaatcactgtt

Protein
Protein IDhabu1_s1864_g06898.t1
Definition-
>habu1_s1864_g06898.t1
MITGFSKSPGQQGPQHESYEEKYERRCKKHESLLRRNNRTTCRLTSKCQSTEAKESAQSPRQKEFFRRRNLTIEELGRTK
MMLPPGKRRSLFPVNCSDSLGQIPPQNYLNCLSNIQPHTKYIQHNFNNIFPLSKSSQAMLAVNVPKNCKGTQTTKELSSE
KKNSCQQTDCGTAVLDKEIIQLSNYLNEALHRELILKQKMVILQELLAMLLEAAEKSWKGQFNEDKLKCRLSMLENQLQI
CTQSYSKRGLKRILLEMEDQKQNYEQKVKESLQKLLEEKMQAQKQFQTAQRALTVVEGDCSLWKDQLNTLKKDWSQLTDQ
HTEVKNKLHVLENKLQWSDTQNSQLQQALKDMENECASLYSRIDNMQEEKRLIMEYLGEMEGKLQTEARQKFILEATIEH
LQKQTVAVPNEVLSWVTTKQNVQLEEEETEKESSLREELQKRTSQLAAKKKECTDLCHKLEILNNEYSSCLANLQQCRDE
FKYSQNKQAQRKHDHWIPIIMVIMVTALVSYLSNFTP
Protein IDhabu1_s1864_g06898.t2
Definition-
>habu1_s1864_g06898.t2
MITGFSKSPGQQGPQHESYEEKYERRCKKHESLLRRNNRTTCRLTSKCQSTEAKESAQSPRQKEFFRRRNLTIEELGRTK
MMLPPGKRRSLFPVNCSDSLGQIPPQNYLNCLSNIQPHTKYIQHNFNNIFPLSKSSQAMLAVNVPKNCKGTQTTKELSSE
KKNSCQQTDCGTAVLDKEIIQLSNYLNEALHRELILKQKMVILQELLAMLLEAAEKSWKGQFNEDKLKCRLSMLENQLQI
CTQSYSKRGLKRILLEMEDQKQNYEQKVKESLQKLLEEKMQAQKQFQTAQRALTVVEGDCSLWKDQLNTLKKDWSQLTDQ
HTEVKNKLHVLENKLQWSDTQNSQLQQALKDMENECASLYSRIDNMQEEKRLIMEYLGEMEGKLQTEARQKFILEATIEH
LQKQTVAVPNEVLSWVTTKQNVQLEEEETEKESSLREELQKRTSQLAAKKKECTDLCHKLEILNNEYSSCLANLQQCRDE
FKYSQNKQAQRKHDHWIPIIMVIMVTALVSYLSNFTP

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Okinawa Institute of Science and Technology
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