Gene
| Gene Model ID | habu1_s1864_g06899 |
|---|---|
| Locus | habu1_scaffold1864 : 385736 ... 422815 : - |
| To GenomeBrowser | habu1_scaffold1864:385736..422815 |
| Genes list of scaffold | habu1_scaffold1864 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| corticosteroid 11-beta-dehydrogenase isozyme partial | GO:0003845 GO:0008207 GO:0008209 GO:0008210 GO:0016020 GO:0030324 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1864_g06899.t2 | 1 | 1 | G0-G1_switch_2 | 1 | 79 | 4.5e-22 | 78.1 | 5.0e-25 | 1.1e-21 | 76.9 |
| habu1_s1864_g06899.t2 | 1 | 1 | adh_short | 147 | 312 | 7.6e-25 | 87.7 | 4.8e-28 | 1.0e-24 | 87.3 |
| habu1_s1864_g06899.t2 | 1 | 1 | KR | 148 | 311 | 3.5e-07 | 30.0 | 1.3e-09 | 2.7e-06 | 27.1 |
| habu1_s1864_g06899.t2 | 1 | 1 | adh_short_C2 | 154 | 330 | 9.3e-12 | 45.2 | 6.5e-15 | 1.4e-11 | 44.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1864_g06899.t2 | gi|530633158|ref|XP_005303633.1| | PREDICTED: corticosteroid 11-beta-dehydrogenase isozyme 1-like isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s1864_g06899.t2 | gi|697475204|ref|XP_009670472.1| | PREDICTED: corticosteroid 11-beta-dehydrogenase isozyme 1-like isoform X1 [Struthio camelus australis] | 0.0 |
| habu1_s1864_g06899.t2 | gi|719757393|ref|XP_010215158.1| | PREDICTED: corticosteroid 11-beta-dehydrogenase isozyme 1 [Tinamus guttatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.5 |
| Venom grand-1 | 14.8 |
| Pit, infrared sensing | 0.8 |
| Nose | 0.9 |
| Brain-1 | 0.1 |
| Eye | 0.2 |
| fetal fibroblast | 0.9 |
| venom gland-2 | 32.6 |
| Brain-2 | 0.1 |
| Spleen | 2.0 |
| Lung | 2.8 |
| Liver | 2.7 |
| Kidney | 44.1 |
| Pancreas | 0.1 |
| Small intestine | 0.3 |
| Large intestine | 0.9 |
| Stomach | 0.6 |
| heart | 0.4 |
| ovary | 1.2 |
| cheek muscle | 0.6 |
Transcript
| Transcript ID | habu1_s1864_g06899.t1 |
|---|---|
| Definition | - |
>habu1_s1864_g06899.t1 cgagcgaggcagacgtgctcttagaggtgtttccaagtggctgagctatggagacaatgcaagagctgatcccatttgcg aaagagatgctgagccagaagcccaatgggaaaatggtcaagctgtacatgctgggcagcatgctggccttctttggggt ggttattggcttggtagagactgtctgcagtcctttcacctctgaagggaagctggaggaagaggaggaggaagaggagg atgagaaaaagaaaaggcctgctctgccactgacaaaaagagaggagaaggtggaggttgtggctcagaaacaggaggac atgatccaggagaaaggaaaacagaacgcacggaacggtattctggcacctgtttttgaacagaagaaacggttccttct aagctgccagcgcgatgggatgaatctgtggcaaaagattttgattcctttggtaggaatggtcttggccatctattttt attcaggaaaagaagagtttaaacctgaaatgttgaaagggaagcgggtgattgttactggagcaagcactggaattggc gagcagatagcataccacctagcacggatgggttctcatctcctgattactgcgcggacagaagcccagctccagcaagt ggttgctcattgcttagagttgggtgcagcatctgccaggtacattaatggcagtatggaagatatgaaatttgctcagg ctgtggtgaagaaagcagaggtattatggggaagtctagatatgctgattctgaatcatattggcaggtcttacttcaat tatttcaatagggacattgagcatgtgcaaaagcttttgaacatcaatttcctaagctatgcaacaatgacagtttcagc tcttcccatgcttataaacagtggaggaagcatagtagttgtttcatctttggcaggcaaaattggcttcccattgactg ttccttattctgcaacaaagtttgcactagagggatttttcaactctttgaggcaggaatttgttatgcagaacatcaat gtttccatcacgctctgcatccttggattcatcaacacaggtacaatatatttgagaatgtcttactaaatgatgtgggc agaaaatgccatgaaagcagtatctggtacattcactcttccacctgccccaaaagaagaatgtgcactagaaatcatta aagggggcattctgcgccagcgggagatttactataaatatatatatacaaagatccctacacttttgcgagattgggct ccagaactcctggattatatccttcggttatgttttaatgtgaacaatcgaaaacaagattaatcatctgtctattcgct gcctctgcatttttcttttctgggtatgcaagttagcgtttttcaaagttgaccactttgagatgtgtgggaattgaagt ccacagaatttaaatttaccaagtctgaaaaacattaatataatccataaaagagaatattcattgaactgggttgaact gtaggatgcttggtgctctctgaacttgattattttgtggcagacgtttcattaccaaactgatcttaagattcactatg ctgttatactgtatatagaccccaaatccagttctgtggcttgggatttaaagctatcaatgattgaattatggatattt atattctggaacaggacaaagaaaataaatgtggatatcttagaaaaactcaggttaataataaatattttgtatgcttt taaagtgcatccagttgattgtttctcttaatctgcattcagaacaaaacatgtcataaagtgaaaaaagttataacaca gtgctgagtttcatagttttgaatcaattccttatgcagatttcttatatagagaggaggtccagcaaataagtgcaagg taccctctggcttggactgataggaagcacttgatagttaacacatctggtattaaacatttggcaaaaaaaagtacatt tttaaatttttcagttttaaaattgtttcaaaaaaatcagttgaaaatgtttatagtaattatattaaagacattctaat tacaattaatg |
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| Transcript ID | habu1_s1864_g06899.t2 |
| Definition | - |
>habu1_s1864_g06899.t2 cgagcgaggcagacgtgctcttagaggtgtttccaagtggctgagctatggagacaatgcaagagctgatcccatttgcg aaagagatgctgagccagaagcccaatgggaaaatggtcaagctgtacatgctgggcagcatgctggccttctttggggt ggttattggcttggtagagactgtctgcagtcctttcacctctgaagggaagctggaggaagaggaggaggaagaggagg atgagaaaaagaaaaggcctgctctgccactgacaaaaagagaggagaaggtggaggttgtggctcagaaacaggaggac atgatccaggagaaaggaaaacagaacgcacggaacggtattctggcacctgtttttgaacagaagaaacggttccttct aagctgccagcgcgatgggatgaatctgtggcaaaagattttgattcctttggtaggaatggtcttggccatctattttt attcaggaaaagaagagtttaaacctgaaatgttgaaagggaagcgggtgattgttactggagcaagcactggaattggc gagcagatagcataccacctagcacggatgggttctcatctcctgattactgcgcggacagaagcccagctccagcaagt ggttgctcattgcttagagttgggtgcagcatctgccaggtacattaatggcagtatggaagatatgaaatttgctcagg ctgtggtgaagaaagcagaggtattatggggaagtctagatatgctgattctgaatcatattggcaggtcttacttcaat tatttcaatagggacattgagcatgtgcaaaagcttttgaacatcaatttcctaagctatgcaacaatgacagtttcagc tcttcccatgcttataaacagtggaggaagcatagtagttgtttcatctttggcaggcaaaattggcttcccattgactg ttccttattctgcaacaaagtttgcactagagggatttttcaactctttgaggcaggaatttgttatgcagaacatcaat gtttccatcacgctctgcatccttggattcatcaacacagaaaatgccatgaaagcagtatctggtacattcactcttcc acctgccccaaaagaagaatgtgcactagaaatcattaaagggggcattctgcgccagcgggagatttactataaatata tatatacaaagatccctacacttttgcgagattgggctccagaactcctggattatatccttcggttatgttttaatgtg aacaatcgaaaacaagattaatcatctgtctattcgctgcctctgcatttttcttttctgggtatgcaagttagcgtttt tcaaagttgaccactttgagatgtgtgggaattgaagtccacagaatttaaatttaccaagtctgaaaaacattaatata atccataaaagagaatattcattgaactgggttgaactgtaggatgcttggtgctctctgaacttgattattttgtggca gacgtttcattaccaaactgatcttaagattcactatgctgttatactgtatatagaccccaaatccagttctgtggctt gggatttaaagctatcaatgattgaattatggatatttatattctggaacaggacaaagaaaataaatgtggatatctta gaaaaactcaggttaataataaatattttgtatgcttttaaagtgcatccagttgattgtttctcttaatctgcattcag aacaaaacatgtcataaagtgaaaaaagttataacacagtgctgagtttcatagttttgaatcaattccttatgcagatt tcttatatagagaggaggtccagcaaataagtgcaaggtaccctctggcttggactgataggaagcacttgatagttaac acatctggtattaaacatttggcaaaaaaaagtacatttttaaatttttcagttttaaaattgtttcaaaaaaatcagtt gaaaatgtttatagtaattatattaaagacattctaattacaattaatg |
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Protein
| Protein ID | habu1_s1864_g06899.t1 |
|---|---|
| Definition | - |
>habu1_s1864_g06899.t1 MLSQKPNGKMVKLYMLGSMLAFFGVVIGLVETVCSPFTSEGKLEEEEEEEEDEKKKRPALPLTKREEKVEVVAQKQEDMI QEKGKQNARNGILAPVFEQKKRFLLSCQRDGMNLWQKILIPLVGMVLAIYFYSGKEEFKPEMLKGKRVIVTGASTGIGEQ IAYHLARMGSHLLITARTEAQLQQVVAHCLELGAASARYINGSMEDMKFAQAVVKKAEVLWGSLDMLILNHIGRSYFNYF NRDIEHVQKLLNINFLSYATMTVSALPMLINSGGSIVVVSSLAGKIGFPLTVPYSATKFALEGFFNSLRQEFVMQNINVS ITLCILGFINTGTIYLRMSY |
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| Protein ID | habu1_s1864_g06899.t2 |
| Definition | - |
>habu1_s1864_g06899.t2 MLSQKPNGKMVKLYMLGSMLAFFGVVIGLVETVCSPFTSEGKLEEEEEEEEDEKKKRPALPLTKREEKVEVVAQKQEDMI QEKGKQNARNGILAPVFEQKKRFLLSCQRDGMNLWQKILIPLVGMVLAIYFYSGKEEFKPEMLKGKRVIVTGASTGIGEQ IAYHLARMGSHLLITARTEAQLQQVVAHCLELGAASARYINGSMEDMKFAQAVVKKAEVLWGSLDMLILNHIGRSYFNYF NRDIEHVQKLLNINFLSYATMTVSALPMLINSGGSIVVVSSLAGKIGFPLTVPYSATKFALEGFFNSLRQEFVMQNINVS ITLCILGFINTENAMKAVSGTFTLPPAPKEECALEIIKGGILRQREIYYKYIYTKIPTLLRDWAPELLDYILRLCFNVNN RKQD |
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