Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s186_g01018
Locus habu1_scaffold186 : 11736 ... 47910 : +
To GenomeBrowser habu1_scaffold186:11736..47910
Genes list of scaffold habu1_scaffold186

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.1
Venom grand-1 3.0
Pit, infrared sensing 4.4
Nose 5.8
Brain-1 2.5
Eye 2.7
fetal fibroblast 4.7
venom gland-2 1.5
Brain-2 2.4
Spleen 2.3
Lung 3.5
Liver 0.7
Kidney 2.2
Pancreas 1.4
Small intestine 1.9
Large intestine 3.2
Stomach 2.2
heart 3.3
ovary 11.0
cheek muscle 8.5

Transcript
Transcript IDhabu1_s186_g01018.t1
Definition-
>habu1_s186_g01018.t1
gaagcgggtgagtttgaagctgcaaggcgagctccatggaaaccgggccgcgggacatcagggtctgttgggcgagctcc
tgcgctcctgggaagggggacttaagatccgcccttgcccgtccggcctgtcagctcttgtcgaggccgaaagagctgcc
tttgtaggtgaagatgaccggcgctgaatctggagcctccagttgcacgcaggcttgatgactgagatgcggatcctccc
ttgatactagttgaaaactgagattgtgatggcaagaccaataatttccccaatggatgtccaaccaacggctcctgaaa
cctttgttgtgctgaaccaaagaatgaaagtagtggaagaggagacaagtgcactgttgaatgatcttcagaaaatggga
ctgaacggacacagcatggaactcttagcttcgaaacacccggtgaactctgaagaccaccaggccatcagccccgtcca
agctcggacagcgtttgttggagcaaataactcattgtggagaacttgtgaaagtctggttaatcgaatatgccggctgg
agagtgtcatccagaccataaaactgaacatattccgattacaaacagaaaaggaattgaatccaaagcatgcagccaat
ttagaacagcggctgaatacaatacaggaggaacacatggaagagctaaaggtgctgcaaatggaagggagaatgctgtg
ccagcagctgaaggagtctcgagaagaggaagaaaaagccagaaatcaagtgcagaagctaagcgctgccctagaaatgg
caactgcaacaaaaagagatgtaaccatttcagctggagaattgagagcaacaaaagaaaaaatgaacaataaactccaa
gagataatggagaaattatccaaggagtccagcacaagggaatctttggaacaagaccaggtggtccttctttatcagat
gcgtgatatggaagcaatggtggaaaaagaacggaagcaggtgcaaattctgcagcaggattgtaacattctacgccata
atattcagctatctcaggagacattacagaaagaacaagagaagatagatcaattggagcaggaatgtgcacatcttaaa
actgatctagactcccgagacaagaccatttccaagctacgagaagaagtccaaactacacagctatgtttgaacacggc
acaagaaaagaatgcaaagtttcgaacaaaaatatttactttacaagaggtagcaagtaagacacagaaacttaatgagc
agttggctcaacagtgcgcagaactaagtggtgctcttcaaaaagctactgtggaaaatgctcaacttacttcagatcat
cagactgctcttcaggcggaacaagaaaaaatgaatcagaaactgaaggaacaagacttgattttggatgctgctcgagc
cagtgttacgggagagctacaggttgtgcagagggaaaaagctcagctccagaaagaactagaagacttgagaaccgagc
atgccgaatgcaagaagagggactgtaaagaagacgccattgccaccgaaaaaaaccacctggagtgtacagtttcccaa
atccaaaatgaactggagacaattctacaggagcgaaatactttgctgaaggaaaaaaagatacttgaagaagagtcgca
gcaaacaatacaagaaaccagaagaacgatagaaaggttggaagccgaactaacggaaaaaaagttggaaattaattctc
tgcaggagtcagtgagagcgctagagaaagaaaaacgggaatttctggagcaggatgctgcacttaagcaccaaaagctc
agagtacagcaactggaagaagaactgcagtccctcatatatgtgcaatcagaaaataatcagctccgccaattttgtat
agccctgaaggctaaatatgatcagacacagtccctccttgtctgtagagaggaagctctttctgtgtcaatcaaatccc
atgacgaagcattaagggagaaccagaagttcagagggcaaataggtgccattgaagaaagagagaagcgcaaggtggca
aatctacaacgcaagctggaagaagcaaaggaagataacatcaaaatgaccacaattctagaaaacgtgttgacttctca
taacaagatgcagatagctttgggaaaggtgcagattgaattggagcacaaagattctgatattgctggcttaaagaaag
ataggacccagaacgagcaaagaattcagacgctggaagaagagctggaagactgtcaaggcaagctagctttggactcc
cagcgcaatgcgaagatgacctcacttcgtaaagccctggaaacctccaaactggacaagaagaaacttatccaaaattt
agaccaaactctacagaccaacagtgccttggaaagcaaactctctcttgttcaagatgagctggaaagcaaagaagcag
aatgccagcaattagcgcaatgcagggaccagctcattgaagaaaccaagagggagacaaagttctatgcagatcgcctg
gagaccctgaagaaacagtttcagacggaacgagaagtggcgaagaaagcagcccaaaaagaatcagccgaggttaaaaa
agctctggaagaggcctgctctaaatctaccgaaatactacgctgcaacaaagaactgcgggcaaaagtgatagacctgg
aagccgcgttggcaaatcagaaggagaaggttaaaaagcagaaaatactaatcacccagtacttcaactccaagaccaac
aatacacacaatgcagagaaaatcaaggagattgagttggaattgaggcaaatggaagagctgaaggacctataccagaa
gaaaaactacgagcagtcccttagtatcaaacaatttgccaccgaattaacaagcctacaaagtgagatgcagcaactgg
ccaaaaatcagcaagtgatggaaaatcagctggaagaagaaaggaaaaagcggaagcagcttgaggaagagtgccaaact
ttggaaaacaccattaagcagctcaagaaatgcaaggaggctactgaagagaaattaaaagaagccagcatagagtctca
acagatatcagctaacctagaagaagctcatcactggttcaagtccaagtttgatagtctgcagcaggaacttctcaaaa
accgaaaatcaaagctgggtgaagaaagtgaagaggagaataagccagtgaagattcctagccaggcctgcctgaagcgg
tgggagaccaaaaatcgcctgaagctcatctccaggaaatatttatcagaacaaaataattgatgacctgcttacccagg
aggttccaggatgtaaaagatgaccctgcacctatgaacatcatgtctcagatctagggccccagtaatggtggtcgtac
ctggaaggagccaaatggtagatcatttcagtgtgatcctccacataccgatgttaacagaggagatcttgtatgaacta
ggaatgctctacactaatgaagaaaagtcctctaaacgttaggcactaggcttcagctatcaagtctttgaaatgcctct
gtggaacttttcagaccggaaaacttcaagttttattaaaaataaattatgtgcctcaatcttaaact
Transcript IDhabu1_s186_g01018.t2
Definition-
>habu1_s186_g01018.t2
acgcgcctgcgtgggacggcgctctcccgggaagcgggacttaagatccgcccttgcccgtccggcctgtcagctcttgt
cgaggccgaaagagctgcctttgtaggtgaagatgaccggcgctgaatctggagcctccagttgcacgcaggcttgatga
ctgagatgcggatcctcccttgatactagttgaaaactgagattgtgatggcaagaccaataatttccccaatggatgtc
caaccaacggctcctgaaacctttgttgtgctgaaccaaagaatgaaagtagtggaagaggagacaagtgcactgttgaa
tgatcttcagaaaatgggactgaacggacacagcatggaactcttagcttcgaaacacccggtgaactctgaagaccacc
aggccatcagccccgtccaagctcggacagcgtttgttggagcaaataactcattgtggagaacttgtgaaagtctggtt
aatcgaatatgccggctggagagtgtcatccagaccataaaactgaacatattccgattacaaacagaaaaggaattgaa
tccaaagcatgcagccaatttagaacagcggctgaatacaatacaggaggaacacatggaagagctaaaggtgctgcaaa
tggaagggagaatgctgtgccagcagctgaaggagtctcgagaagaggaagaaaaagccagaaatcaagtgcagaagcta
agcgctgccctagaaatggcaactgcaacaaaaagagatgtaaccatttcagctggagaattgagagcaacaaaagaaaa
aatgaacaataaactccaagagataatggagaaattatccaaggagtccagcacaagggaatctttggaacaagaccagg
tggtccttctttatcagatgcgtgatatggaagcaatggtggaaaaagaacggaagcaggtgcaaattctgcagcaggat
tgtaacattctacgccataatattcagctatctcaggagacattacagaaagaacaagagaagatagatcaattggagca
ggaatgtgcacatcttaaaactgatctagactcccgagacaagaccatttccaagctacgagaagaagtccaaactacac
agctatgtttgaacacggcacaagaaaagaatgcaaagtttcgaacaaaaatatttactttacaagaggtagcaagtaag
acacagaaacttaatgagcagttggctcaacagtgcgcagaactaagtggtgctcttcaaaaagctactgtggaaaatgc
tcaacttacttcagatcatcagactgctcttcaggcggaacaagaaaaaatgaatcagaaactgaaggaacaagacttga
ttttggatgctgctcgagccagtgttacgggagagctacaggttgtgcagagggaaaaagctcagctccagaaagaacta
gaagacttgagaaccgagcatgccgaatgcaagaagagggactgtaaagaagacgccattgccaccgaaaaaaaccacct
ggagtgtacagtttcccaaatccaaaatgaactggagacaattctacaggagcgaaatactttgctgaaggaaaaaaaga
tacttgaagaagagtcgcagcaaacaatacaagaaaccagaagaacgatagaaaggttggaagccgaactaacggaaaaa
aagttggaaattaattctctgcaggagtcagtgagagcgctagagaaagaaaaacgggaatttctggagcaggatgctgc
acttaagcaccaaaagctcagagtacagcaactggaagaagaactgcagtccctcatatatgtgcaatcagaaaataatc
agctccgccaattttgtatagccctgaaggctaaatatgatcagacacagtccctccttgtctgtagagaggaagctctt
tctgtgtcaatcaaatcccatgacgaagcattaagggagaaccagaagttcagagggcaaataggtgccattgaagaaag
agagaagcgcaaggtggcaaatctacaacgcaagctggaagaagcaaaggaagataacatcaaaatgaccacaattctag
aaaacgtgttgacttctcataacaagatgcagatagctttgggaaaggtgcagattgaattggagcacaaagattctgat
attgctggcttaaagaaagataggacccagaacgagcaaagaattcagacgctggaagaagagctggaagactgtcaagg
caagctagctttggactcccagcgcaatgcgaagatgacctcacttcgtaaagccctggaaacctccaaactggacaaga
agaaacttatccaaaatttagaccaaactctacagaccaacagtgccttggaaagcaaactctctcttgttcaagatgag
ctggaaagcaaagaagcagaatgccagcaattagcgcaatgcagggaccagctcattgaagaaaccaagagggagacaaa
gttctatgcagatcgcctggagaccctgaagaaacagtttcagacggaacgagaagtggcgaagaaagcagcccaaaaag
aatcagccgaggttaaaaaagctctggaagaggcctgctctaaatctaccgaaatactacgctgcaacaaagaactgcgg
gcaaaagtgatagacctggaagccgcgttggcaaatcagaaggagaaggttaaaaagcagaaaatactaatcacccagta
cttcaactccaagaccaacaatacacacaatgcagagaaaatcaaggagattgagttggaattgaggcaaatggaagagc
tgaaggacctataccagaagaaaaactacgagcagtcccttagtatcaaacaatttgccaccgaattaacaagcctacaa
agtgagatgcagcaactggccaaaaatcagcaagtgatggaaaatcagctggaagaagaaaggaaaaagcggaagcagct
tgaggaagagtgccaaactttggaaaacaccattaagcagctcaagaaatgcaaggaggctactgaagagaaattaaaag
aagccagcatagagtctcaacagatatcagctaacctagaagaagctcatcactggttcaagtccaagtttgatagtctg
cagcaggaacttctcaaaaaccgaaaatcaaagctgggtgaagaaagtgaagaggagaataagccagtgaagattcctag
ccaggcctgcctgaagcggtgggagaccaaaaatcgcctgaagctcatctccaggaaatatttatcagaacaaaataatt
gatgacctgcttacccaggaggttccaggatgtaaaagatgaccctgcacctatgaacatcatgtctcagatctagggcc
ccagtaatggtggtcgtacctggaaggagccaaatggtagatcatttcagtgtgatcctccacataccgatgttaacaga
ggagatcttgtatgaactaggaatgctctacactaatgaagaaaagtcctctaaacgttaggcactaggcttcagctatc
aagtctttgaaatgcctctgtggaacttttcagaccggaaaacttcaagttttattaaaaataaattatgtgcctcaatc
ttaaact

Protein
Protein IDhabu1_s186_g01018.t1
Definition-
>habu1_s186_g01018.t1
MDVQPTAPETFVVLNQRMKVVEEETSALLNDLQKMGLNGHSMELLASKHPVNSEDHQAISPVQARTAFVGANNSLWRTCE
SLVNRICRLESVIQTIKLNIFRLQTEKELNPKHAANLEQRLNTIQEEHMEELKVLQMEGRMLCQQLKESREEEEKARNQV
QKLSAALEMATATKRDVTISAGELRATKEKMNNKLQEIMEKLSKESSTRESLEQDQVVLLYQMRDMEAMVEKERKQVQIL
QQDCNILRHNIQLSQETLQKEQEKIDQLEQECAHLKTDLDSRDKTISKLREEVQTTQLCLNTAQEKNAKFRTKIFTLQEV
ASKTQKLNEQLAQQCAELSGALQKATVENAQLTSDHQTALQAEQEKMNQKLKEQDLILDAARASVTGELQVVQREKAQLQ
KELEDLRTEHAECKKRDCKEDAIATEKNHLECTVSQIQNELETILQERNTLLKEKKILEEESQQTIQETRRTIERLEAEL
TEKKLEINSLQESVRALEKEKREFLEQDAALKHQKLRVQQLEEELQSLIYVQSENNQLRQFCIALKAKYDQTQSLLVCRE
EALSVSIKSHDEALRENQKFRGQIGAIEEREKRKVANLQRKLEEAKEDNIKMTTILENVLTSHNKMQIALGKVQIELEHK
DSDIAGLKKDRTQNEQRIQTLEEELEDCQGKLALDSQRNAKMTSLRKALETSKLDKKKLIQNLDQTLQTNSALESKLSLV
QDELESKEAECQQLAQCRDQLIEETKRETKFYADRLETLKKQFQTEREVAKKAAQKESAEVKKALEEACSKSTEILRCNK
ELRAKVIDLEAALANQKEKVKKQKILITQYFNSKTNNTHNAEKIKEIELELRQMEELKDLYQKKNYEQSLSIKQFATELT
SLQSEMQQLAKNQQVMENQLEEERKKRKQLEEECQTLENTIKQLKKCKEATEEKLKEASIESQQISANLEEAHHWFKSKF
DSLQQELLKNRKSKLGEESEEENKPVKIPSQACLKRWETKNRLKLISRKYLSEQNN
Protein IDhabu1_s186_g01018.t2
Definition-
>habu1_s186_g01018.t2
MDVQPTAPETFVVLNQRMKVVEEETSALLNDLQKMGLNGHSMELLASKHPVNSEDHQAISPVQARTAFVGANNSLWRTCE
SLVNRICRLESVIQTIKLNIFRLQTEKELNPKHAANLEQRLNTIQEEHMEELKVLQMEGRMLCQQLKESREEEEKARNQV
QKLSAALEMATATKRDVTISAGELRATKEKMNNKLQEIMEKLSKESSTRESLEQDQVVLLYQMRDMEAMVEKERKQVQIL
QQDCNILRHNIQLSQETLQKEQEKIDQLEQECAHLKTDLDSRDKTISKLREEVQTTQLCLNTAQEKNAKFRTKIFTLQEV
ASKTQKLNEQLAQQCAELSGALQKATVENAQLTSDHQTALQAEQEKMNQKLKEQDLILDAARASVTGELQVVQREKAQLQ
KELEDLRTEHAECKKRDCKEDAIATEKNHLECTVSQIQNELETILQERNTLLKEKKILEEESQQTIQETRRTIERLEAEL
TEKKLEINSLQESVRALEKEKREFLEQDAALKHQKLRVQQLEEELQSLIYVQSENNQLRQFCIALKAKYDQTQSLLVCRE
EALSVSIKSHDEALRENQKFRGQIGAIEEREKRKVANLQRKLEEAKEDNIKMTTILENVLTSHNKMQIALGKVQIELEHK
DSDIAGLKKDRTQNEQRIQTLEEELEDCQGKLALDSQRNAKMTSLRKALETSKLDKKKLIQNLDQTLQTNSALESKLSLV
QDELESKEAECQQLAQCRDQLIEETKRETKFYADRLETLKKQFQTEREVAKKAAQKESAEVKKALEEACSKSTEILRCNK
ELRAKVIDLEAALANQKEKVKKQKILITQYFNSKTNNTHNAEKIKEIELELRQMEELKDLYQKKNYEQSLSIKQFATELT
SLQSEMQQLAKNQQVMENQLEEERKKRKQLEEECQTLENTIKQLKKCKEATEEKLKEASIESQQISANLEEAHHWFKSKF
DSLQQELLKNRKSKLGEESEEENKPVKIPSQACLKRWETKNRLKLISRKYLSEQNN

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