Gene
| Gene Model ID | habu1_s186_g01022 |
|---|---|
| Locus | habu1_scaffold186 : 286258 ... 310455 : - |
| To GenomeBrowser | habu1_scaffold186:286258..310455 |
| Genes list of scaffold | habu1_scaffold186 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| splicing factor 3b subunit 1 isoform x1 | GO:0000785 GO:0003682 GO:0005689 GO:0009952 GO:0044822 GO:0071013 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s186_g01022.t2 | 1 | 1 | SF3b1 | 293 | 461 | 6.50062e-42 | 143.0 | 9.00054e-42 | 1.2e-38 | 132.3 |
| habu1_s186_g01022.t2 | 1 | 1 | HEAT_2 | 1026 | 1115 | 4.1e-12 | 46.2 | 1.4e-06 | 0.0019 | 18.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s186_g01022.t2 | gi|224055491|ref|XP_002192675.1| | PREDICTED: splicing factor 3B subunit 1 isoform X1 [Taeniopygia guttata] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 88.6 |
| Venom grand-1 | 185.4 |
| Pit, infrared sensing | 98.1 |
| Nose | 89.0 |
| Brain-1 | 89.2 |
| Eye | 89.7 |
| fetal fibroblast | 71.8 |
| venom gland-2 | 210.0 |
| Brain-2 | 73.1 |
| Spleen | 180.9 |
| Lung | 111.7 |
| Liver | 131.3 |
| Kidney | 113.4 |
| Pancreas | 261.4 |
| Small intestine | 188.4 |
| Large intestine | 128.2 |
| Stomach | 148.9 |
| heart | 84.9 |
| ovary | 75.7 |
| cheek muscle | 80.0 |
Transcript
| Transcript ID | habu1_s186_g01022.t1 |
|---|---|
| Definition | - |
>habu1_s186_g01022.t1 cccccttccatctcgcttcccgtttttcttcgagctccacaaaatggcgaagatcgccaagacccacgaagatattgaag cacagattcgagaaattcaaggcaaaaaagctgcacttgatgaagctcaaggagttggccttgattctacagggtattat gatcaagagatctatggtggaagtgacagcaggtttgctggatatgtaacttcaattgcagcaactgaacttgaagatga cgacgatgactattcttctacaagtttgcttggccagaagaagcctgggtatcatgcaccggtggcattacttaatgaca taccacagtcaactgaacagtatgatccatttgccgaacatcgtccacaaaagattgccgatagggaagatgaatacaaa aatcggagacggatgatgattatttcccctgaacgtcttgatccttttgcagatggtgggaagacacctgatcctaaaat gaatgctagaacatatatggatgttatgcgtgaacaacatttaacaaaagaagagagagaaattcgacagcaactagcag aaaaggctaaagctggtgaacttaaagtcgtcaatggtgctgcatcccagccaccatcaaaacgcaaacggcgttgggac cagactgctgaccagactcctggtgccacacctaagaaattgtctagctgggatcaagctgagacacctggacatactcc gtcactccgctgggatgaaacacctggccgtgcaaagggtagtgagacacctggagcaacccctggatctaaaatatggg atccaactcctagtcatacaccatcaggagctgcaacacctgggcgtggtgatacacctggtcatgcaacccccgggcat ggaggggcaacttccagtgctcggaagaatcgatgggatgagactcccaaaacagaaagagataccccgggacatgggag tggatgggcagaaactcctcgtactgatcgagggggggattccattggtgaaacgccaactcctggagcaagtaaaagaa aatcacgttgggatgagacaccagcaagtcagatgggtggcagcacccctgtattaacaccaggcaaaacaccaattggt acaccagctatgaacatggcaacacctacaccagggcacataatgagcatgactcctgaacaactccaagcctggcgatg ggaaagagaaattgatgagagaaatagacccctttctgatgaagagttggatgctatgtttcctgagggctatcgggttc tccctcccccagcaggttatgttcctattcgtactccagctcgtaaacttacagcaacaccaacccccttgggtggtatg actggattccacatgcaaacagaagacagaactatgaagagtgtcaatgaccagccctcaggaaatcttcctttcttaaa gccagatgacatacaatattttgataaactgctggttgatgttgatgaatcaactcttagtccagaggaacagaaagaaa gaaaaataatgaaactgcttttgaagataaaaaatggcacccctccaatgaggaaggctgctttgcgacagattactgac aaagcccgagaatttggagctggcccactgttcaatcaaattttgccccttctgatgtctccaacccttgaagatcaaga acgccacttgcttgttaaagttattgacaggatcttatataagttggatgatttagtccggccatatgtgcacaagattc ttgtggtcattgaacctttgctgattgatgaagattactatgctagagtggaaggcagagaaataatttccaacctggct aaggcagctgggctggcaacaatgatctctactatgcgacctgatattgataacatggatgaatatgttcgtaacacaac agctcgagcttttgctgttgttgcttctgccctaggaattccatccttgttgccgtttttaaaagctgtgtgcaaaagca agaagtcttggcaagccagacacactggcatcaagattgtgcagcagattgctattctaatgggttgtgccattttaccc catctcaggagtttggttgaaattattgaacacggcttggtggatgagcaacagaaagtacgcaccattagtgctttagc cattgctgctttagctgaagcagcaaccccatatggcattgaatcatttgactctgttctaaagcccctctggaaaggca tacgtcaacacagaggaaagggtctggctgctttcttgaaagccataggttatcttattccacttatggatgcagagtat gccaactactataccagagaagtaatgctaattcttatcagagagtttcagtctcctgatgaagaaatgaagaagattgt attgaaggtggtaaagcagtgttgtggcacagatggtgttgaagcaaactacattaaaacagaaattttgcctccgtttt tcaagcatttctggcagcatagaatggcattggatagaagaaattatagacagttggttgatacaactgtggagcttgca aacaaagttggagctgccgaaattatttccaggattgtggatgatctgaaagatgaagctgagcaatatagaaaaatggt tatggaaactattgaaaagatcatggggaatctgggtgcagctgacattgaccacaagttggaagaacaacttattgatg gtattctatatgctttccaagaacagactacagaggactcagtgatgttgaatggctttggtacagtggtaaatgctctt ggcaagcgagtgaaaccatacttaccccagatctgtggtaccgtgttgtggcgtttgaacaacaaatcagccaaagtgag acagcaagctgccgacctgatatctcgtactgcagttgtcatgaaaacctgtcaagaggaaaaattgatgggccacttgg gtgtggtattgtatgagtatttgggtgaagaatatcctgaagtactgggcagtattctaggagctcttaaagccattgtg aatgtcataggtatgcacaaaatgactcctccaattaaagatctgctgccaagactcacacctatcttgaagaacaggca tgaaaaagtacaagagaattgtattgatttggttggacgtattgcagacagaggggcagaatatgtttctgcaagggaat ggatgaggatttgctttgaattgcttgagttgttaaaagcacataagaaagctattcgaagagctactgtgaatacattt ggttatattgcaaaagctattggaccacatgatgtgctggcaaccctgctaaataatttgaaagtacaagaacgacaaaa cagagtgtgtacaacagtggcaattgctattgtggctgaaacctgttccccttttacagtactgcctgcccttatgaatg aatacagagttccagagttgaatgttcagaatggtgtattaaaatctctttctttcctatttgaatatattggagaaatg ggaaaagactacatttacgctgttacccctttacttgaagatgctttaatggacagggatctggttcacaggcaaacagc tagtgcagtcgtgcagcatatgtctcttggagtatatgggtttggctgtgaggactctctgaatcacttgctaaattatg tgtggcccaacgtgtttgaaacatctcctcatgtcatccaagcagttatgggagcactggagggtctaagggtggctatt ggaccttgccggatgttgcagtattgtttacagggtttgtttcaccctgccagaaaagtcagagatgtgtactggaagat ttataattccatctatattggttcacaggatgctctaatagcacattatccacgaatctacaacgacgaaaagaatacct acattcgttatgaacttgattatgtcttgtaattttatttctcatttgttttgtgttcaatagacagctattccatattt ggttcagatctggtgatgtacaatttttaagacactgcagagtaccttagaatggtcagaggcagaacttagaaatcaat agcatgatttttaaataacatgtctttgttttggtgttaaagccagttagtgaccaagaacacaatgattgcagagaata tggggagggggggaagcatcttgatgaggatttaagattctgttccttgtgtttaaaggggctgtttgagaaataaacat ttgtgtataaaatattaat |
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| Transcript ID | habu1_s186_g01022.t2 |
| Definition | - |
>habu1_s186_g01022.t2 cccccttccatctcgcttcccgtttttcttcgagctccacaaaatggcgaagatcgccaagacccacgaagatattgaag cacagattcgagaaattcaaggcaaaaaagctgcacttgatgaagctcaaggagttggccttgattctacagggtattat gatcaagagatctatggtggaagtgacagcaggtttgctggatatgtaacttcaattgcagcaactgaacttgaagatga cgacgatgactattcttctacaagtttgcttggccagaagaagcctgggtatcatgcaccggtggcattacttaatgaca taccacagtcaactgaacagtatgatccatttgccgaacatcgtccacaaaagattgccgatagggaagatgaatacaaa aatcggagacggatgatgattatttcccctgaacgtcttgatccttttgcagatgaactgctgatggagacaaaggcacg aaagtgtgggaagacacctgatcctaaaatgaatgctagaacatatatggatgttatgcgtgaacaacatttaacaaaag aagagagagaaattcgacagcaactagcagaaaaggctaaagctggtgaacttaaagtcgtcaatggtgctgcatcccag ccaccatcaaaacgcaaacggcgttgggaccagactgctgaccagactcctggtgccacacctaagaaattgtctagctg ggatcaagctgagacacctggacatactccgtcactccgctgggatgaaacacctggccgtgcaaagggtagtgagacac ctggagcaacccctggatctaaaatatgggatccaactcctagtcatacaccatcaggagctgcaacacctgggcgtggt gatacacctggtcatgcaacccccgggcatggaggggcaacttccagtgctcggaagaatcgatgggatgagactcccaa aacagaaagagataccccgggacatgggagtggatgggcagaaactcctcgtactgatcgagggggggattccattggtg aaacgccaactcctggagcaagtaaaagaaaatcacgttgggatgagacaccagcaagtcagatgggtggcagcacccct gtattaacaccaggcaaaacaccaattggtacaccagctatgaacatggcaacacctacaccagggcacataatgagcat gactcctgaacaactccaagcctggcgatgggaaagagaaattgatgagagaaatagacccctttctgatgaagagttgg atgctatgtttcctgagggctatcgggttctccctcccccagcaggttatgttcctattcgtactccagctcgtaaactt acagcaacaccaacccccttgggtggtatgactggattccacatgcaaacagaagacagaactatgaagagtgtcaatga ccagccctcaggaaatcttcctttcttaaagccagatgacatacaatattttgataaactgctggttgatgttgatgaat caactcttagtccagaggaacagaaagaaagaaaaataatgaaactgcttttgaagataaaaaatggcacccctccaatg aggaaggctgctttgcgacagattactgacaaagcccgagaatttggagctggcccactgttcaatcaaattttgcccct tctgatgtctccaacccttgaagatcaagaacgccacttgcttgttaaagttattgacaggatcttatataagttggatg atttagtccggccatatgtgcacaagattcttgtggtcattgaacctttgctgattgatgaagattactatgctagagtg gaaggcagagaaataatttccaacctggctaaggcagctgggctggcaacaatgatctctactatgcgacctgatattga taacatggatgaatatgttcgtaacacaacagctcgagcttttgctgttgttgcttctgccctaggaattccatccttgt tgccgtttttaaaagctgtgtgcaaaagcaagaagtcttggcaagccagacacactggcatcaagattgtgcagcagatt gctattctaatgggttgtgccattttaccccatctcaggagtttggttgaaattattgaacacggcttggtggatgagca acagaaagtacgcaccattagtgctttagccattgctgctttagctgaagcagcaaccccatatggcattgaatcatttg actctgttctaaagcccctctggaaaggcatacgtcaacacagaggaaagggtctggctgctttcttgaaagccataggt tatcttattccacttatggatgcagagtatgccaactactataccagagaagtaatgctaattcttatcagagagtttca gtctcctgatgaagaaatgaagaagattgtattgaaggtggtaaagcagtgttgtggcacagatggtgttgaagcaaact acattaaaacagaaattttgcctccgtttttcaagcatttctggcagcatagaatggcattggatagaagaaattataga cagttggttgatacaactgtggagcttgcaaacaaagttggagctgccgaaattatttccaggattgtggatgatctgaa agatgaagctgagcaatatagaaaaatggttatggaaactattgaaaagatcatggggaatctgggtgcagctgacattg accacaagttggaagaacaacttattgatggtattctatatgctttccaagaacagactacagaggactcagtgatgttg aatggctttggtacagtggtaaatgctcttggcaagcgagtgaaaccatacttaccccagatctgtggtaccgtgttgtg gcgtttgaacaacaaatcagccaaagtgagacagcaagctgccgacctgatatctcgtactgcagttgtcatgaaaacct gtcaagaggaaaaattgatgggccacttgggtgtggtattgtatgagtatttgggtgaagaatatcctgaagtactgggc agtattctaggagctcttaaagccattgtgaatgtcataggtatgcacaaaatgactcctccaattaaagatctgctgcc aagactcacacctatcttgaagaacaggcatgaaaaagtacaagagaattgtattgatttggttggacgtattgcagaca gaggggcagaatatgtttctgcaagggaatggatgaggatttgctttgaattgcttgagttgttaaaagcacataagaaa gctattcgaagagctactgtgaatacatttggttatattgcaaaagctattggaccacatgatgtgctggcaaccctgct aaataatttgaaagtacaagaacgacaaaacagagtgtgtacaacagtggcaattgctattgtggctgaaacctgttccc cttttacagtactgcctgcccttatgaatgaatacagagttccagagttgaatgttcagaatggtgtattaaaatctctt tctttcctatttgaatatattggagaaatgggaaaagactacatttacgctgttacccctttacttgaagatgctttaat ggacagggatctggttcacaggcaaacagctagtgcagtcgtgcagcatatgtctcttggagtatatgggtttggctgtg aggactctctgaatcacttgctaaattatgtgtggcccaacgtgtttgaaacatctcctcatgtcatccaagcagttatg ggagcactggagggtctaagggtggctattggaccttgccggatgttgcagtattgtttacagggtttgtttcaccctgc cagaaaagtcagagatgtgtactggaagatttataattccatctatattggttcacaggatgctctaatagcacattatc cacgaatctacaacgacgaaaagaatacctacattcgttatgaacttgattatgtcttgtaattttatttctcatttgtt ttgtgttcaatagacagctattccatatttggttcagatctggtgatgtacaatttttaagacactgcagagtaccttag aatggtcagaggcagaacttagaaatcaatagcatgatttttaaataacatgtctttgttttggtgttaaagccagttag tgaccaagaacacaatgattgcagagaatatggggagggggggaagcatcttgatgaggatttaagattctgttccttgt gtttaaaggggctgtttgagaaataaacatttgtgtataaaatattaat |
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Protein
| Protein ID | habu1_s186_g01022.t1 |
|---|---|
| Definition | - |
>habu1_s186_g01022.t1 MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATELEDDDDDYSSTSLLGQKK PGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKNRRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHL TKEEREIRQQLAEKAKAGELKVVNGAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGS ETPGATPGSKIWDPTPSHTPSGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAETPRTDRGGDS IGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDE ELDAMFPEGYRVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDV DESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYK LDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIP SLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIE SFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVE ANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAA DIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVM KTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRI ADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAET CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGF GCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIA HYPRIYNDEKNTYIRYELDYVL |
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| Protein ID | habu1_s186_g01022.t2 |
| Definition | - |
>habu1_s186_g01022.t2 MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATELEDDDDDYSSTSLLGQKK PGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKNRRRMMIISPERLDPFADELLMETKARKCGKTPDPKMNART YMDVMREQHLTKEEREIRQQLAEKAKAGELKVVNGAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRW DETPGRAKGSETPGATPGSKIWDPTPSHTPSGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAE TPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTPAMNMATPTPGHIMSMTPEQLQAWRWEREI DERNRPLSDEELDAMFPEGYRVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDI QYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLL VKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAF AVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAAL AEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVV KQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETI EKIMGNLGAADIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAA DLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQ ENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCT TVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVV QHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSI YIGSQDALIAHYPRIYNDEKNTYIRYELDYVL |
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