Gene
| Gene Model ID | habu1_s186_g01024 |
|---|---|
| Locus | habu1_scaffold186 : 332210 ... 344145 : - |
| To GenomeBrowser | habu1_scaffold186:332210..344145 |
| Genes list of scaffold | habu1_scaffold186 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 60 kda heat shock mitochondrial | GO:0001530 GO:0002039 GO:0002368 GO:0002755 GO:0002842 GO:0003725 GO:0005524 GO:0005615 GO:0005743 GO:0005769 GO:0005829 GO:0005886 GO:0005905 GO:0006919 GO:0006986 GO:0009986 GO:0019907 GO:0030135 GO:0030141 GO:0032727 GO:0032729 GO:0032733 GO:0032735 GO:0032755 GO:0042026 GO:0042100 GO:0043032 GO:0043066 GO:0044822 GO:0046696 GO:0048291 GO:0050870 GO:0051087 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s186_g01024.t1 | 1 | 1 | Cpn60_TCP1 | 47 | 549 | 0.0 | 384.5 | 0.0 | 0.0 | 384.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s186_g01024.t1 | gi|602671048|ref|XP_007441041.1| | PREDICTED: 60 kDa heat shock protein, mitochondrial [Python bivittatus] | 0.0 |
| habu1_s186_g01024.t1 | gi|637350708|ref|XP_003227043.2| | PREDICTED: 60 kDa heat shock protein, mitochondrial [Anolis carolinensis] | 0.0 |
| habu1_s186_g01024.t1 | gi|694839735|ref|XP_009460526.1| | PREDICTED: 60 kDa heat shock protein, mitochondrial [Nipponia nippon] | 0.0 |
| habu1_s186_g01024.t1 | gi|514755844|ref|XP_005021933.1| | PREDICTED: 60 kDa heat shock protein, mitochondrial [Anas platyrhynchos] | 0.0 |
| habu1_s186_g01024.t1 | gi|701315941|ref|XP_009980100.1| | PREDICTED: 60 kDa heat shock protein, mitochondrial [Tauraco erythrolophus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 38.0 |
| Venom grand-1 | 33.8 |
| Pit, infrared sensing | 51.1 |
| Nose | 41.9 |
| Brain-1 | 32.4 |
| Eye | 29.5 |
| fetal fibroblast | 385.7 |
| venom gland-2 | 71.1 |
| Brain-2 | 33.9 |
| Spleen | 38.4 |
| Lung | 20.4 |
| Liver | 94.7 |
| Kidney | 148.1 |
| Pancreas | 106.8 |
| Small intestine | 43.6 |
| Large intestine | 31.9 |
| Stomach | 59.9 |
| heart | 61.5 |
| ovary | 42.2 |
| cheek muscle | 58.0 |
Transcript
| Transcript ID | habu1_s186_g01024.t1 |
|---|---|
| Definition | - |
>habu1_s186_g01024.t1 gttgccttcgcccgccacagaaatgctgcgtttaccatcagtgctacgtcaactaaggccggtatccagagccctggccc cacaccttacaagagcctatgcaaaagatgtgaaatttggagcagatgccagagctcttatgttgcagggagtagatcta ctagctgatgctgtagctgtcactatgggaccaaagggaagaacagtaattattgaacagagttggggaagccctaaggt gacaaaagatggtgttacagtagccaaggcaattgacttaaaggataagtacaaaaacattggagcaaggctagttcaag atgttgccaacaacaccaatgaagaggcaggagatggtacaactactgcaacagtactggcacgttcaattgccaaggaa ggatttgaaaagatcagtaaaggagcaaatccagtggaaattagaagaggtgtgatgcttgctgtggaggctgtaattaa tgaattgaagaaattgtccaagccagtcacaactccagaagaaattgctcaggttgccacaatatcagcaaatggggata aagagattggtaacataatctccgatgccatgaagaaggttggacggaaaggggttattacagtgaaggatggaaaaacc ttaaacgatgagttggaaattattgaaggtatgaagtttgacagaggctacatctctccctacttcattaatacagccaa aggacagaaatgtgaattccaagatgcttatctcttaatcagcgaaaagaagatttccagtgttcaatccatagtaccag ctcttgaaattgcaaataatcatcgtaagcctttagttattattgctgaagatgttgatggagaagccctcagcacactt gtactaaacagattgaaagttggcctgcaggtggttgcagtaaaagcacctggttttggtgacaatagaaaaaatcaact taaagatatggcaattgctactggtggtgctgtattaggagaggaaggtttaactataaatctggaagatgttcagcctc atgactttggcaaagttggagaagtcattgtaaccaaagatgactgcttattgcttaaaggaaaaggtgataagactcag attgaaaaacggattcaagaaataattgaacaactggaaaccacaacaagtgaatatgaaaaagagaagctaaacgagcg cttggctaagctttctgatggagtagctttactaaaggttggaggaacaagtgatgttgaagttaatgagaagaaagaca gagtcactgatgccctgaatgccactcgtgctgctgtagaagaaggcatagtcctgggtggtggctgtgcattgctccgt tgtattccagcactagatgttttgattccagccaatgaagatcagaaaactggcatagagattataagaagaacactgaa aattccagctatgactattgccaagaatgcaggggttgaaggatcactgatagtggagaaaatcatgcaaagcccacctg atgttggttatgatgcaatgcttggtgacttcgtgaatatgatagaaaaaggcattattgacccaacaaaggttgtgaga acagcgctgatggatgctgcaggagtagcttcccttttatctacagctgaagcagttgtaactgaaatccccaaggaaga gaaggatgctgctgctgctatgggaggaatgggtggaggaatgggaggtggtatgttctaaagcctaggctacatggatg cgtatcatgaactacaatgcatgacctgataatttaagcgaaccttgggtcagagtcggaaaggatggatagtgactgca gagaaagggtctgtgtttaaaaaaagaaaaaaatcactgtaacattcagttactggatttcagttgtatgattgtttaaa cagtcattgtccatgcttacagataatttattttgtactttgaataaagacatttgtacattcctgatactgggtgcaga tccatgtaccaatcttgtgctctaaacttaaaaccagttgaagcacttgcaattctgctaaataagactttattggtgcc tgctgccactaaaaaatgcagaagccattgtgtgcaagactgaataaaattgtgtacaaagtagacaaatatacaattat gtgacaactttatgtaataaaacaattgctctaaggtatggta |
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Protein
| Protein ID | habu1_s186_g01024.t1 |
|---|---|
| Definition | - |
>habu1_s186_g01024.t1 MLRLPSVLRQLRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTV AKAIDLKDKYKNIGARLVQDVANNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEIRRGVMLAVEAVINELKKLSK PVTTPEEIAQVATISANGDKEIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ DAYLLISEKKISSVQSIVPALEIANNHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMAIAT GGAVLGEEGLTINLEDVQPHDFGKVGEVIVTKDDCLLLKGKGDKTQIEKRIQEIIEQLETTTSEYEKEKLNERLAKLSDG VALLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPALDVLIPANEDQKTGIEIIRRTLKIPAMTIA KNAGVEGSLIVEKIMQSPPDVGYDAMLGDFVNMIEKGIIDPTKVVRTALMDAAGVASLLSTAEAVVTEIPKEEKDAAAAM GGMGGGMGGGMF |
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