Gene
| Gene Model ID | habu1_s186_g01025 |
|---|---|
| Locus | habu1_scaffold186 : 344796 ... 350773 : + |
| To GenomeBrowser | habu1_scaffold186:344796..350773 |
| Genes list of scaffold | habu1_scaffold186 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 10 kda heat shock mitochondrial | GO:0001649 GO:0005524 GO:0005739 GO:0006457 GO:0016020 GO:0044822 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s186_g01025.t1 | 1 | 1 | Cpn10 | 9 | 100 | 3.0e-29 | 100.7 | 2.3e-33 | 3.4e-29 | 100.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s186_g01025.t1 | gi|602671050|ref|XP_007441042.1| | PREDICTED: 10 kDa heat shock protein, mitochondrial [Python bivittatus] | 0.0 |
| habu1_s186_g01025.t1 | gi|637350646|ref|XP_008118274.1| | PREDICTED: 10 kDa heat shock protein, mitochondrial isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s186_g01025.t1 | gi|45384204|ref|NP_990398.1| | 10 kDa heat shock protein, mitochondrial [Gallus gallus] | 0.0 |
| habu1_s186_g01025.t1 | gi|514755860|ref|XP_005021937.1| | PREDICTED: 10 kDa heat shock protein, mitochondrial-like isoform X3 [Anas platyrhynchos] | 0.0 |
| habu1_s186_g01025.t1 | gi|513193409|ref|XP_004942648.1| | PREDICTED: 10 kDa heat shock protein, mitochondrial-like isoform X1 [Gallus gallus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 126.1 |
| Venom grand-1 | 234.1 |
| Pit, infrared sensing | 242.7 |
| Nose | 122.8 |
| Brain-1 | 72.1 |
| Eye | 127.7 |
| fetal fibroblast | 773.6 |
| venom gland-2 | 517.4 |
| Brain-2 | 87.4 |
| Spleen | 207.0 |
| Lung | 163.5 |
| Liver | 382.5 |
| Kidney | 684.2 |
| Pancreas | 470.4 |
| Small intestine | 277.1 |
| Large intestine | 248.1 |
| Stomach | 422.8 |
| heart | 487.8 |
| ovary | 314.3 |
| cheek muscle | 196.5 |
Transcript
| Transcript ID | habu1_s186_g01025.t1 |
|---|---|
| Definition | - |
>habu1_s186_g01025.t1 cggcaggaacccagagaggaaagagttggaagcatccagcatggcaggacaggcatttaaaaaattccttcctctttttg accgagtactggtcgaaagatgtgcgtctgagacagtaactaaaggaggaatcatgattccagaaaaatctcaaggaaag gtgctacaagccactgttgtggcagttggatcaggttcgaaaaacaaggatggaaacactcacccggttagtgtaaaggt tggtgagaaggttctactacctgaatacgggggtacaaaagttatactggatgataaggactatttcatatttagagatg gtgatattcttggaaaatatcttgattgagcagttcatactctggcattatcatgaagttgtcattccacaaaaagtgcc caaatgcttttgttccatcatgtaaataatgattttcttaataaatgcaacatttctcaaatgatat |
|
Protein
| Protein ID | habu1_s186_g01025.t1 |
|---|---|
| Definition | - |
>habu1_s186_g01025.t1 MAGQAFKKFLPLFDRVLVERCASETVTKGGIMIPEKSQGKVLQATVVAVGSGSKNKDGNTHPVSVKVGEKVLLPEYGGTK VILDDKDYFIFRDGDILGKYLD |
|