Gene
| Gene Model ID | habu1_s186_g01027 |
|---|---|
| Locus | habu1_scaffold186 : 363739 ... 398915 : - |
| To GenomeBrowser | habu1_scaffold186:363739..398915 |
| Genes list of scaffold | habu1_scaffold186 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s186_g01027.t1 | 1 | 1 | Raftlin | 1 | 440 | 0.0 | 608.3 | 0.0 | 0.0 | 608.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s186_g01027.t1 | gi|602665801|ref|XP_007438482.1| | PREDICTED: raftlin-2 [Python bivittatus] | 0.0 |
| habu1_s186_g01027.t1 | gi|697434464|ref|XP_009679737.1| | PREDICTED: raftlin-2 isoform X2 [Struthio camelus australis] | 0.0 |
| habu1_s186_g01027.t1 | gi|697434455|ref|XP_009679711.1| | PREDICTED: raftlin-2 isoform X1 [Struthio camelus australis] | 0.0 |
| habu1_s186_g01027.t1 | gi|686612426|ref|XP_009282955.1| | PREDICTED: raftlin-2 isoform X1 [Aptenodytes forsteri] | 0.0 |
| habu1_s186_g01027.t1 | gi|686612436|ref|XP_009282960.1| | PREDICTED: raftlin-2 isoform X2 [Aptenodytes forsteri] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.9 |
| Venom grand-1 | 3.0 |
| Pit, infrared sensing | 4.8 |
| Nose | 2.2 |
| Brain-1 | 2.9 |
| Eye | 1.7 |
| fetal fibroblast | 4.5 |
| venom gland-2 | 1.9 |
| Brain-2 | 4.2 |
| Spleen | 13.5 |
| Lung | 6.8 |
| Liver | 0.8 |
| Kidney | 0.9 |
| Pancreas | 1.2 |
| Small intestine | 2.2 |
| Large intestine | 5.0 |
| Stomach | 2.1 |
| heart | 3.8 |
| ovary | 0.5 |
| cheek muscle | 24.0 |
Transcript
| Transcript ID | habu1_s186_g01027.t1 |
|---|---|
| Definition | - |
>habu1_s186_g01027.t1 gaggactaaaccggttgtaagtcaaggactacccaaccggtcaccacggtgaagctctctgtcctatttctttgacttca tttgcccgttttatttcttttactggccgttacactgaagcagatctcctgactgtcttaagatggggtgtgggctgaga aagctagaagatccagatgacagcagtcctggaaaaatattttcaacgctgaagagaccacaagtggaaacaaaaacaga ctctgcttatgagtacctattgctagattttacattagaagttacctcaaatccagaaattatcaaaatatgctctgttt tggatattgcaaagaatgtagaggagtattataataaaggatatgtggtaggagctattcatcctgttttactgtcatct ggacaaagaaggcattttccagcaagtcacatctatcgagttgtgcttgtgcgtctcaaattcagccagaagaatccacc aatgagagaaccaaaacaacccaggcttgtgattgaggagtgtcctttaacgtacgaaaaactaacgaacgaggcagtta aggaagtgctacagaaggtcaatgatgctgctaaaagaggaatgaagtttgttgggtttataacccagtcttgctctcag tctaaaatctgcaatggcacaaatatgggtgaagatatggagtctgactcgactctatgcagaaggaacagagagcagag gagccatgattcagacgaaaatgttagaatctggaatgaagggacgccgagtggtcaatcctctgagagtggaatacagg aagaaattcagccagatggcaagccaacacaaaagactgattttcaagatggaagagaaggctgtcccagcccaaataaa ttaaaggaaaaagaagataccaaactatatacagttttcaatgtgtttgaagatgattccaccagttggacctatcatga tggtattttgtctctgaaagtgtcgcggaaaggacctgtgattagtacattggatgccgattggttagatttaaccacat tttattataaacaagggttgtcattaattgactcctttgtgtgttgggaagcctctaaagctgactttgggcccaaatca ttagaagggttatttatatatgaagaagaaccgggatttccaggttcggagaggaaaggaaatgatgctattgttgtaga acaatggactgtcattgagggcagtgaaatcaaaacagattatggtcctttactgcacactttggctgaatttggctggc ttttaacatgtgtgttgcctactcctatcatccgactggacagtgaaggcaatctagccactaagcaagttgttttcctt cagaggccagctatggggaacccagctgtccagatacctgagaaaaaaaataataagcaatttggagaagaaaagttgaa cataagaagtggaaaagttggatcagacacagctacttctcagcctgtacagcacatgcatcctacagaggaattccata tagcaccttctccacagtgctggcccaaggatgaatctgcccactatggaagcttccctgcattcatgagcagcgatggc atgcttagagaattggaagaaggacagtttgaccaagaagatggagtcactcaagtcacttgtatgtgaccaggaaatta ctaagaggaaccaatagaaagtatttctacaaattgaatgtaataaaaattagcaatgttcttcctttgggacccactga tcttgaagccttttaagtagcttcaataaaacttgttcataaacatgttctg |
|
Protein
| Protein ID | habu1_s186_g01027.t1 |
|---|---|
| Definition | - |
>habu1_s186_g01027.t1 MGCGLRKLEDPDDSSPGKIFSTLKRPQVETKTDSAYEYLLLDFTLEVTSNPEIIKICSVLDIAKNVEEYYNKGYVVGAIH PVLLSSGQRRHFPASHIYRVVLVRLKFSQKNPPMREPKQPRLVIEECPLTYEKLTNEAVKEVLQKVNDAAKRGMKFVGFI TQSCSQSKICNGTNMGEDMESDSTLCRRNREQRSHDSDENVRIWNEGTPSGQSSESGIQEEIQPDGKPTQKTDFQDGREG CPSPNKLKEKEDTKLYTVFNVFEDDSTSWTYHDGILSLKVSRKGPVISTLDADWLDLTTFYYKQGLSLIDSFVCWEASKA DFGPKSLEGLFIYEEEPGFPGSERKGNDAIVVEQWTVIEGSEIKTDYGPLLHTLAEFGWLLTCVLPTPIIRLDSEGNLAT KQVVFLQRPAMGNPAVQIPEKKNNKQFGEEKLNIRSGKVGSDTATSQPVQHMHPTEEFHIAPSPQCWPKDESAHYGSFPA FMSSDGMLRELEEGQFDQEDGVTQVTCM |
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