Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s186_g01030
Locus habu1_scaffold186 : 661077 ... 793277 : +
To GenomeBrowser habu1_scaffold186:661077..793277
Genes list of scaffold habu1_scaffold186

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s186_g01030.t4 1 1 Sad1_UNC 210 341 2.1e-32 111.7 3.1e-36 4.6e-32 110.6

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.0
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.0
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 1.5
Stomach 0.0
heart 0.0
ovary 0.0
cheek muscle 0.1

Transcript
Transcript IDhabu1_s186_g01030.t1
Definition-
>habu1_s186_g01030.t1
gaggactaaaccggtcgtaagtcgaggactacccaaccggtcctccggcaatgcaaaaaaagttgcgatacatcgtgaca
cgtcacgtgacgtgttatagacaagatggctttttcattgcttatattttctttggaaagctgtttcagaagtacgaagg
acatcgtgagtatcatgagagcagtaaaacaggggaaggtatatttggctatataggtaaagacctgttggatcagagtt
ctttcattatccagcattgttttgaagctccccgcttggtggaacctattgctaacatcacagtgtaccaggttcagcag
ccacttattctaggttttatttctctcctatgcacttcctctgatgttttcaagcagttcatgaagatgcagttaagtcg
ccagaatgaggcccttcagcaacatctccagaaacagattggatctttccgtcaaaaagttgcaggactccagactctcg
tagatgcccttgaaaatatccatggacattgggagacccagaagcatatatttgaacaagggggcagcacacaaaatgaa
agcagccattttgggaagaaagactatgcgctgagctctgaaggtgcccatgtcgtgaaattcagtaacagctttaacac
aagagcacaagtctgtatgttggggttctgctgggattatatgcggtcaccaaatatgattttagagcgggataatactc
ctgggaattgctgggccatgaagggatctcaaggttacgtagtcatcaaattgtctcaagctgtccgtccgacttcagta
gccctggaccatatttcaaagacagtctctcatacagaagagataactagcgccccacagaatttttctgtctatggatt
caaaaatgattttgagaaggaagaaggacaatttttggggtcatttgtttacagagtggatagatttcctttgcaaacat
ttaaattagagagtttcaacatctttttgtgtcatggtgatcgctcaaacctccatactggccagagaacttcaggtata
gtggtactgaacaggaggaaaatgccagttcccagtggagccaagaaatatgagcttcagtgtgatggctattgtctgca
cagaaaaaaaaatgtatcacgtgaacaagctccatcttccagcaaagatttgtccccagaaggttttggattcttgtggc
cttggctaatcaatttcagtcctgccagttgggtgaagctggatgggctatccaaaataatacaattctttcttaaaaag
aataacaaagttgtcccagaaggactgctaaagaaaaggccctgcatcctcctcatcctcaagaagagcaacaaaatcca
acccatgcagactctcggaaaatcctccaaaaagtacttggtggattctgcctgaagggcaaacaggatgaagaggaaca
aatttgattttctcagtgccatatttcataaacattatcgtccatctagcagaagcaattgtgagtgagctaaagcaccc
caaatctagtggcaactaattattggacatgaaacccaaagaattagctctgggaaagtattcctgccaaatctgaggaa
gttgactacatagcaaaaaacattacattcacataatgttcttcttggttgtatatctcccatttaaggatatctgtgga
gagatagctgatgaaagaaacacagctaaaatgaactgaattatgaggctcgaagaaaagttagaaatgtcacagcacct
ggaatcttggctccatgaataattaagtcacatctttgttttgctccttgatatcttctagcaggtgacagaaatgcttc
acccatattacatgcctgcttcagtgctgtcccgctcaatggtgaccattgaatgtatctcatttggaatttgtgcaagg
atttttacaatatttccaatattcaggattaagagatgagcaaggagaaaggataaatacagacagatgttttatatgta
caggataaaactcaaaacccaaagcaaaaaataaaatgtaggacaataatcaaagccacaacacaaaaataaaatgtaac
tcagaaggacacataaaactataaaagagctgattgctcaactggactgagcagttagttgaataaaacattggaaaata
ttcttgaaa
Transcript IDhabu1_s186_g01030.t2
Definition-
>habu1_s186_g01030.t2
gaggactaaaccggtcgtaagtcgaggactacccaaccggtcctccggcaatgcaaaaaaagttgcgatacatcgtgaca
cgtcacgtgacgtgttatagacaagatggctttttcattgcttatattttctttggaaagctgtttcagaagtacgaagg
acatcgtgagtatcatgagagcagtaaaacaggggaaggtatatttggctatataggtaaagacctgttggatcagagtt
ctttcattatccagcattgttttgaagctccccgcttggtggaacctattgctaacatcacagtgtaccaggttcagcag
ccacttattctaggttttatttctctcctatgcacttcctctgatgttttcaagcagttcatgaagatgcagttaagtcg
ccagaatgaggcccttcagcaacatctccagaaacagattggatctttccgtcaaaaagttgcaggactccagactctcg
tagatgcccttgaaaatatccatggacattgggagacccagaagcatatatttgaacaagggggcagcacacaaaatgaa
agcagccattttgggaagaaagactatgcgctgagctctgaaggtgcccatgtcgtgaaattcagtaacagctttaacac
aagagcacaagtctgtatgttggggttctgctgggattatatgcggtcaccaaatatgattttagagcgggataatactc
ctgggaattgctgggccatgaagggatctcaaggttacgtagtcatcaaattgtctcaagctgtccgtccgacttcagta
gccctggaccatatttcaaagacagtctctcatacagaagagataactagcgccccacagaatttttctgtctatggatt
caaaaatgattttgagaaggaagaaggacaatttttggggtcatttgtttacagagtggatagatttcctttgcaaacat
ttaaattagaggaagcacctttggataaatttaactatatactcttgaagatcttgacaaattggcatcatccaaactat
acatgtatctatggatttcgggaaaaagcactgagcatggctcagttattcatgaggtcaatgatgttgatgtatgtatc
cttagattatatagattctttagattcatctgaaaacatgaagctacctttctatgaccgatggaaaaggaggaaaatgc
cagttcccagtggagccaagaaatatgagcttcagtgtgatggctattgtctgcacagaaaaaaaaatgtatcacgtgaa
caagctccatcttccagcaaagatttgtccccagaaggttttggattcttgtggccttggctaatcaatttcagtcctgc
cagttgggtgaagctggatgggctatccaaaataatacaattctttcttaaaaagaataacaaagttgtcccagaaggac
tgctaaagaaaaggccctgcatcctcctcatcctcaagaagagcaacaaaatccaacccatgcagactctcggaaaatcc
tccaaaaagtacttggtggattctgcctgaagggcaaacaggatgaagaggaacaaatttgattttctcagtgccatatt
tcataaacattatcgtccatctagcagaagcaattgtgagtgagctaaagcaccccaaatctagtggcaactaattattg
gacatgaaacccaaagaattagctctgggaaagtattcctgccaaatctgaggaagttgactacatagcaaaaaacatta
cattcacataatgttcttcttggttgtatatctcccatttaaggatatctgtggagagatagctgatgaaagaaacacag
ctaaaatgaactgaattatgaggctcgaagaaaagttagaaatgtcacagcacctggaatcttggctccatgaataatta
agtcacatctttgttttgctccttgatatcttctagcaggtgacagaaatgcttcacccatattacatgcctgcttcagt
gctgtcccgctcaatggtgaccattgaatgtatctcatttggaatttgtgcaaggatttttacaatatttccaatattca
ggattaagagatgagcaaggagaaaggataaatacagacagatgttttatatgtacaggataaaactcaaaacccaaagc
aaaaaataaaatgtaggacaataatcaaagccacaacacaaaaataaaatgtaactcagaaggacacataaaactataaa
agagctgattgctcaactggactgagcagttagttgaataaaacattggaaaatattcttgaaa
Transcript IDhabu1_s186_g01030.t3
Definition-
>habu1_s186_g01030.t3
gaggactaaaccggtcgtaagtcgaggactacccaaccggtcctccggcaatgcaaaaaaagttgcgatacatcgtgaca
cgtcacgtgacgtgttatagacaagatggctttttcattgcttatattttctttggaaagctgtttcagaagtacgaagg
acatcgtgagtatcatgagagcagtaaaacaggggaaggtatatttggctatataggtaaagacctgttggatcagagtt
ctttcattatccagcattgttttgaagctccccgcttggtggaacctattgctaacatcacagtgtaccaggttcagcag
ccacttattctaggttttatttctctcctatgcacttcctctgatgttttcaagcagttcatgaagatgcagttaagtcg
ccagaatgaggcccttcagcaacatctccagaaacagattggatctttccgtcaaaaagttgcaggactccagactctcg
tagatgcccttgaaaatatccatggacattgggagacccagaagcatatatttgaacaagggggcagcacacaaaatgaa
agcagccattttgggaagaaagactatgcgctgagctctgaaggtgcccatgtcgtgaaattcagtaacagctttaacac
aagagcacaagtctgtatgttggggttctgctgggattatatgcggtcaccaaatatgattttagagcgggataatactc
ctgggaattgctgggccatgaagggatctcaaggttacgtagtcatcaaattgtctcaagctgtccgtccgacttcagta
gccctggaccatatttcaaagacagtctctcatacagaagagataactagcgccccacagaatttttctgtctatggatt
caaaaatgattttgagaaggaagaaggacaatttttggggtcatttgtttacagagtggatagatttcctttgcaaacat
ttaaattagaggaagcacctttggataaatttaactatatactcttgaagatcttgacaaattggcatcatccaaactat
acatgtatctatggatttcgggaaaaagcactgagcatggctcagttattcatgaggtcaatgatgttgatgtatgtatc
cttagattatatagattctttagattcatctgaaaacatgaagctacctttctatgaccgatggaaaaggaggaaaatgc
cagttcccagtggagggctaaggaagagtgactggctcaagattgcccagctgtcttcttgcctaaggcacataaaagag
gccaagaaatatgagcttcagtgtgatggctattgtctgcacagaaaaaaaaatgtatcacgtgaacaagctccatcttc
cagcaaagatttgtccccagaaggttttggattcttgtggccttggctaatcaatttcagtcctgccagttgggtgaagc
tggatgggctatccaaaataatacaattctttcttaaaaagaataacaaagttgtcccagaaggactgctaaagaaaagg
ccctgcatcctcctcatcctcaagaagagcaacaaaatccaacccatgcagactctcggaaaatcctccaaaaagtactt
ggtggattctgcctgaagggcaaacaggatgaagaggaacaaatttgattttctcagtgccatatttcataaacattatc
gtccatctagcagaagcaattgtgagtgagctaaagcaccccaaatctagtggcaactaattattggacatgaaacccaa
agaattagctctgggaaagtattcctgccaaatctgaggaagttgactacatagcaaaaaacattacattcacataatgt
tcttcttggttgtatatctcccatttaaggatatctgtggagagatagctgatgaaagaaacacagctaaaatgaactga
attatgaggctcgaagaaaagttagaaatgtcacagcacctggaatcttggctccatgaataattaagtcacatctttgt
tttgctccttgatatcttctagcaggtgacagaaatgcttcacccatattacatgcctgcttcagtgctgtcccgctcaa
tggtgaccattgaatgtatctcatttggaatttgtgcaaggatttttacaatatttccaatattcaggattaagagatga
gcaaggagaaaggataaatacagacagatgttttatatgtacaggataaaactcaaaacccaaagcaaaaaataaaatgt
aggacaataatcaaagccacaacacaaaaataaaatgtaactcagaaggacacataaaactataaaagagctgattgctc
aactggactgagcagttagttgaataaaacattggaaaatattcttgaaa
Transcript IDhabu1_s186_g01030.t4
Definition-
>habu1_s186_g01030.t4
gaggactaaaccggtcgtaagtcgaggactacccaaccggtcctccggcaatgcaaaaaaagttgcgatacatcgtgaca
cgtcacgtgacgtgttatagacaagatggctttttcattgcttatattttctttggaaagctgtttcagaagtacgaagg
acatcgtgagtatcatgagagcagtaaaacaggggaaggtatatttggctatataggtaaagacctgttggatcagagtt
ctttcattatccagcattgttttgaagctccccgcttggtggaacctattgctaacatcacagtgtaccaggttcagcag
ccacttattctaggttttatttctctcctatgcacttcctctgatgttttcaagcagttcatgaagatgcagttaagtcg
ccagaatgaggcccttcagcaacatctccagaaacagattggatctttccgtcaaaaagttgcaggactccagactctcg
tagatgcccttgaaaatatccatggacattgggagacccagaagcatatatttgaacaagggggcagcacacaaaatgaa
agcagccattttgggaagaaagactatgcgctgagctctgaaggtgcccatgtcgtgaaattcagtaacagctttaacac
aagagcacaagtctgtatgttggggttctgctgggattatatgcggtcaccaaatatgattttagagcgggataatactc
ctgggaattgctgggccatgaagggatctcaaggttacgtagtcatcaaattgtctcaagctgtccgtccgacttcagta
gccctggaccatatttcaaagacagtctctcatacagaagagataactagcgccccacagaatttttctgtctatgagag
gcaagagggattcaaaaatgattttgagaaggaagaaggacaatttttggggtcatttgtttacagagtggatagatttc
ctttgcaaacatttaaattagaggaagcacctttggataaatttaactatatactcttgaagatcttgacaaattggcat
catccaaactatacatgtatctatggatttcgggaaaaagcactgagcatggctcagttattcatgaggtcaatgatgtt
gatgtatgtatccttagattatatagattctttagattcatctgaaaacatgaagctacctttctatgaccgatggaaaa
ggaggaaaatgccagttcccagtggagccaagaaatatgagcttcagtgtgatggctattgtctgcacagaaaaaaaaat
gtatcacgtgaacaagctccatcttccagcaaagatttgtccccagaaggttttggattcttgtggccttggctaatcaa
tttcagtcctgccagttgggtgaagctggatgggctatccaaaataatacaattctttcttaaaaagaataacaaagttg
tcccagaaggactgctaaagaaaaggccctgcatcctcctcatcctcaagaagagcaacaaaatccaacccatgcagact
ctcggaaaatcctccaaaaagtacttggtggattctgcctgaagggcaaacaggatgaagaggaacaaatttgattttct
cagtgccatatttcataaacattatcgtccatctagcagaagcaattgtgagtgagctaaagcaccccaaatctagtggc
aactaattattggacatgaaacccaaagaattagctctgggaaagtattcctgccaaatctgaggaagttgactacatag
caaaaaacattacattcacataatgttcttcttggttgtatatctcccatttaaggatatctgtggagagatagctgatg
aaagaaacacagctaaaatgaactgaattatgaggctcgaagaaaagttagaaatgtcacagcacctggaatcttggctc
catgaataattaagtcacatctttgttttgctccttgatatcttctagcaggtgacagaaatgcttcacccatattacat
gcctgcttcagtgctgtcccgctcaatggtgaccattgaatgtatctcatttggaatttgtgcaaggatttttacaatat
ttccaatattcaggattaagagatgagcaaggagaaaggataaatacagacagatgttttatatgtacaggataaaactc
aaaacccaaagcaaaaaataaaatgtaggacaataatcaaagccacaacacaaaaataaaatgtaactcagaaggacaca
taaaactataaaagagctgattgctcaactggactgagcagttagttgaataaaacattggaaaatattcttgaaa

Protein
Protein IDhabu1_s186_g01030.t1
Definition-
>habu1_s186_g01030.t1
MQKKLRYIVTRHVTCYRQDGFFIAYIFFGKLFQKYEGHREYHESSKTGEGIFGYIGKDLLDQSSFIIQHCFEAPRLVEPI
ANITVYQVQQPLILGFISLLCTSSDVFKQFMKMQLSRQNEALQQHLQKQIGSFRQKVAGLQTLVDALENIHGHWETQKHI
FEQGGSTQNESSHFGKKDYALSSEGAHVVKFSNSFNTRAQVCMLGFCWDYMRSPNMILERDNTPGNCWAMKGSQGYVVIK
LSQAVRPTSVALDHISKTVSHTEEITSAPQNFSVYGFKNDFEKEEGQFLGSFVYRVDRFPLQTFKLESFNIFLCHGDRSN
LHTGQRTSGIVVLNRRKMPVPSGAKKYELQCDGYCLHRKKNVSREQAPSSSKDLSPEGFGFLWPWLINFSPASWVKLDGL
SKIIQFFLKKNNKVVPEGLLKKRPCILLILKKSNKIQPMQTLGKSSKKYLVDSA
Protein IDhabu1_s186_g01030.t2
Definition-
>habu1_s186_g01030.t2
MQKKLRYIVTRHVTCYRQDGFFIAYIFFGKLFQKYEGHREYHESSKTGEGIFGYIGKDLLDQSSFIIQHCFEAPRLVEPI
ANITVYQVQQPLILGFISLLCTSSDVFKQFMKMQLSRQNEALQQHLQKQIGSFRQKVAGLQTLVDALENIHGHWETQKHI
FEQGGSTQNESSHFGKKDYALSSEGAHVVKFSNSFNTRAQVCMLGFCWDYMRSPNMILERDNTPGNCWAMKGSQGYVVIK
LSQAVRPTSVALDHISKTVSHTEEITSAPQNFSVYGFKNDFEKEEGQFLGSFVYRVDRFPLQTFKLEEAPLDKFNYILLK
ILTNWHHPNYTCIYGFREKALSMAQLFMRSMMLMYVSLDYIDSLDSSENMKLPFYDRWKRRKMPVPSGAKKYELQCDGYC
LHRKKNVSREQAPSSSKDLSPEGFGFLWPWLINFSPASWVKLDGLSKIIQFFLKKNNKVVPEGLLKKRPCILLILKKSNK
IQPMQTLGKSSKKYLVDSA
Protein IDhabu1_s186_g01030.t3
Definition-
>habu1_s186_g01030.t3
MQKKLRYIVTRHVTCYRQDGFFIAYIFFGKLFQKYEGHREYHESSKTGEGIFGYIGKDLLDQSSFIIQHCFEAPRLVEPI
ANITVYQVQQPLILGFISLLCTSSDVFKQFMKMQLSRQNEALQQHLQKQIGSFRQKVAGLQTLVDALENIHGHWETQKHI
FEQGGSTQNESSHFGKKDYALSSEGAHVVKFSNSFNTRAQVCMLGFCWDYMRSPNMILERDNTPGNCWAMKGSQGYVVIK
LSQAVRPTSVALDHISKTVSHTEEITSAPQNFSVYGFKNDFEKEEGQFLGSFVYRVDRFPLQTFKLEEAPLDKFNYILLK
ILTNWHHPNYTCIYGFREKALSMAQLFMRSMMLMYVSLDYIDSLDSSENMKLPFYDRWKRRKMPVPSGGLRKSDWLKIAQ
LSSCLRHIKEAKKYELQCDGYCLHRKKNVSREQAPSSSKDLSPEGFGFLWPWLINFSPASWVKLDGLSKIIQFFLKKNNK
VVPEGLLKKRPCILLILKKSNKIQPMQTLGKSSKKYLVDSA
Protein IDhabu1_s186_g01030.t4
Definition-
>habu1_s186_g01030.t4
MQKKLRYIVTRHVTCYRQDGFFIAYIFFGKLFQKYEGHREYHESSKTGEGIFGYIGKDLLDQSSFIIQHCFEAPRLVEPI
ANITVYQVQQPLILGFISLLCTSSDVFKQFMKMQLSRQNEALQQHLQKQIGSFRQKVAGLQTLVDALENIHGHWETQKHI
FEQGGSTQNESSHFGKKDYALSSEGAHVVKFSNSFNTRAQVCMLGFCWDYMRSPNMILERDNTPGNCWAMKGSQGYVVIK
LSQAVRPTSVALDHISKTVSHTEEITSAPQNFSVYERQEGFKNDFEKEEGQFLGSFVYRVDRFPLQTFKLEEAPLDKFNY
ILLKILTNWHHPNYTCIYGFREKALSMAQLFMRSMMLMYVSLDYIDSLDSSENMKLPFYDRWKRRKMPVPSGAKKYELQC
DGYCLHRKKNVSREQAPSSSKDLSPEGFGFLWPWLINFSPASWVKLDGLSKIIQFFLKKNNKVVPEGLLKKRPCILLILK
KSNKIQPMQTLGKSSKKYLVDSA

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