Gene
| Gene Model ID | habu1_s186_g01034 |
|---|---|
| Locus | habu1_scaffold186 : 1016666 ... 1280968 : - |
| To GenomeBrowser | habu1_scaffold186:1016666..1280968 |
| Genes list of scaffold | habu1_scaffold186 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dna-binding protein satb2 isoform x2 | GO:0000118 GO:0000122 GO:0000785 GO:0001764 GO:0002076 GO:0003682 GO:0005667 GO:0005737 GO:0006338 GO:0009880 GO:0021902 GO:0043565 GO:0045944 GO:0048704 GO:0051216 GO:0060021 GO:0071310 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s186_g01034.t2 | 1 | 1 | CUT | 417 | 452 | 6.0e-09 | 35.5 | 1.9e-12 | 2.7e-08 | 33.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s186_g01034.t2 | gi|558138451|ref|XP_006117989.1| | PREDICTED: DNA-binding protein SATB2 isoform X2 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.1 |
| Venom grand-1 | 0.5 |
| Pit, infrared sensing | 4.5 |
| Nose | 0.2 |
| Brain-1 | 1.3 |
| Eye | 0.4 |
| fetal fibroblast | 1.3 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.8 |
| Spleen | 0.7 |
| Lung | 0.9 |
| Liver | 4.0 |
| Kidney | 2.6 |
| Pancreas | 1.6 |
| Small intestine | 1.9 |
| Large intestine | 7.6 |
| Stomach | 0.5 |
| heart | 3.1 |
| ovary | 0.9 |
| cheek muscle | 8.2 |
Transcript
| Transcript ID | habu1_s186_g01034.t1 |
|---|---|
| Definition | - |
>habu1_s186_g01034.t1 gcggcagctactgggtggtgctggtggtgtgtgtgtgcgttccgccgcttctgctcacccgtgcatggcagttgcggaaa ggctttcgcttcaggacgtcagaaatatgtacctgacgcgggggaagttgagggtgggtggggtggaaaacaccaagccc cctgatggcgaaatatctggggtccgccagaggaaggttaaacacgccgtctcgggcaccccaaaggacgcagttctgcg tgggagcccaagtcagccaagttacggacagaatataagcagtccttgctcattttattgtgacctgcctgtgggaacgt tgtctccaactcagagtaatatggatcggagaagtgagagtccctgcttaagggatagcccagagagagggagcggcagc cctgatgtcaaaggtcctcccccggtgaaggtggccaggcttgaacagaatggcagccctatgggagccagagggaggct caatggttctgtcaccaaatcagtgggaggtttgatgatccccgtcttttgtgtcgtggaacaactggacacttctcttg aatatgataatcgagaagaacatgcagagtttgttctggttcgtaaagatgtgctttttagtcagctagtggagactgcg ctcctggcactcggttattctcacagctctgcagctcaggcacaaggaataatcaaacttgggaaatggaatcctcttcc attaacttatatgacagatgcacctgatgcaacagtagctgacatgttacaagacgtctatcatgttgtgacactgaaaa ttcaattacagagttgttcaaagctagaagatttgccagcagaacagtggaaccatgccacagtccgcaatgccttaaag gaattgctcaaagagatgaatcagagcacgttagccaaagaatgccctctctcccagagtatgatatcatccattgtaaa tagcacatattatgcaaatgtgtcagctactaagtgccaggaatttggaagatggtataaaaagtacaagaagattaaag tggaacgagttgaaagagacaacctgtcagaatattgtgttcttggtcaacgtcccatgcacttaccgaatatcaaccaa ctggcaactttgggcaaaacaaatgaacaatctcctcatggtcaaattcaccacagtactccaatcagaaaccaagtgcc aacgttacaaccaatcatgagccctggtctccttacacctcaactcagtccacaactagtaaggcagcaaatagcaatgg cccatttgataaaccaacagattgcagccaaaacctcaacaccgacaacagacctccccattaaggtggacggagccaac atcaacatcacagctgccatttatgacgagatccaacaggagatgaaaagggccaaggtgtctcaggctttgttcgccaa agtagctgccaacaaaagtcagggttggctgtgtgagctgttgcgttggaaagaaaacccaagccctgaaaatcgaacac tttgggaaaatctgtgcaccattcggcgatttctgaatcttccccaacatgagagggatctcatctatgaagaagaatct cggcatcatcacagcgaacgtatgcagcatgttgtccaacttactcctgagcctgtacaggtacttcatagacagcaatc tcagccagcaaaggaaaactctccaccaagagaagaggctccgccccctcctgcagaggatgcatctacaaaaaagccaa gatcccgtactaagatttcattagaggctttgggtatccttcagagtttcatccatgatgttggcctttatccagaccag gaggccatccacactttatctgcccagttggatctgcctaagcacaccatcatcaaattcttccagaaccagcgttacca tgtaaagcatcatgggaaactaaaagagcatttgggtacagtggtggatgtggcagaatataaagatgaagagctgctga ctgagtcagaggagaatgacaattcgttctctcagacctcttctcagagacaggggaaagctgcgcaagaggaaattgct cccaccccaatatctttagataataatgacctgacagttgtgttgttctcattcccatgtgcaagtctagatccagggct ggaggaggttttcgaggaatctgaaagtggggcagaattttctacaactgttctagaagacagaactggaaacaatgggt tcttggaacaggaagttctctgcacattaaaagcctgcattttaaaagaaaaacctcccctgagctgcactgttcttctt ggtccagggtatggccatgtttctagaccccttcatcagaaacgcctgacctttgcatcagtcatgaccctcctttgtct cctgtcggttctgccggagttgatccatgacccaatgacctcagggatcttgactgaaccaagaagttcccttggagaga caactctatgcatggtattcaaggctgtaactatcttcatattccagcttcaatctctggctatcgggggtgagtcatta gcccccgcggagagggcccgcaacctgggcgtcctcctggatgctcggctgtctttagacgatcatgtgacggccgtggc caggggggcttttcatcaggctcgcctgatacgccagttgcgcccctttctggatcaggacgccctacgcacagtcactc aagccctcgttgtttcccgcctggactattgcaatgctctctacatggggctccccttgaggtgcacccggaggctccag ctagttcagaatgcggctgcgtgggggattttgggggcctctagatgctcccatgtaacacctctcctgcacgagctgca ctggctgccggtggccttccgggtgcgcttcaaggtgttagtaacaacttttaaagcgctccatggcaatggacccagat gctactgtggtgccttccagttatctatatctgactggactatatccctagtcagcatggacaatggctaggattcatgg aaatagtcatccacaataaccatgcatccttaagtgtcagactttgaatgtataagatcacaatgtactgaactgtaaat gtatgatgtatttaaaaaaaaataaggtattttatttatttattattatatttatatagttgcccatcttgtactaaact ctgggcagctcacaaccaacagataaaaccacatatatgtacaataaaaattttttaaaacaaaaaatat |
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| Transcript ID | habu1_s186_g01034.t2 |
| Definition | - |
>habu1_s186_g01034.t2 gcggcagctactgggtggtgctggtggtgtgtgtgtgcgttccgccgcttctgctcacccgtgcatggcagttgcggaaa ggctttcgcttcaggacgtcagaaatatgtacctgacgcgggggaagttgagggtgggtggggtggaaaacaccaagccc cctgatggcgaaatatctggggtccgccagaggaaggttaaacacgccgtctcgggcaccccaaaggacgcagttctgcg tgggagcccaagtcagccaagttacggacagaatataagcagtccttgctcattttattgtgacctgcctgtgggaacgt tgtctccaactcagagtaatatggatcggagaagtgagagtccctgcttaagggatagcccagagagagggagcggcagc cctgatgtcaaaggtcctcccccggtgaaggtggccaggcttgaacagaatggcagccctatgggagccagagggaggct caatggttctgtcaccaaatcagtgggaggtttgatgatccccgtcttttgtgtcgtggaacaactggacacttctcttg aatatgataatcgagaagaacatgcagagtttgttctggttcgtaaagatgtgctttttagtcagctagtggagactgcg ctcctggcactcggttattctcacagctctgcagctcaggcacaaggaataatcaaacttgggaaatggaatcctcttcc attaacttatatgacagatgcacctgatgcaacagtagctgacatgttacaagacgtctatcatgttgtgacactgaaaa ttcaattacagagttgttcaaagctagaagatttgccagcagaacagtggaaccatgccacagtccgcaatgccttaaag gaattgctcaaagagatgaatcagagcacgttagccaaagaatgccctctctcccagagtatgatatcatccattgtaaa tagcacatattatgcaaatgtgtcagctactaagtgccaggaatttggaagatggtataaaaagtacaagaagattaaag tggaacgagttgaaagagacaacctgtcagaatattgtgttcttggtcaacgtcccatgcacttaccgaatatcaaccaa ctggcaactttgggcaaaacaaatgaacaatctcctcatggtcaaattcaccacagtactccaatcagaaaccaagtgcc aacgttacaaccaatcatgagccctggtctccttacacctcaactcagtccacaactagtaaggcagcaaatagcaatgg cccatttgataaaccaacagattgcagccaaaacctcaacaccgacaacagacctccccattaaggtggacggagccaac atcaacatcacagctgccatttatgacgagatccaacaggagatgaaaagggccaaggtgtctcaggctttgttcgccaa agtagctgccaacaaaagtcagatgctgacatttttctgcactgaagatgtggattcgttctctcagacctcttctcaga gacaggggaaagctgcgcaagaggaaattgctcccaccccaatatctttagataataatgacctgacagttgtgttgttc tcattcccatgtgcaagtctagatccagggctggaggaggttttcgaggaatctgaaagtggggcagaattttctacaac tgttctagaagacagaactggaaacaatgggttcttggaacaggaagttctctgcacattaaaagcctgcattttaaaag aaaaacctcccctgagctgcactgttcttcttggtccagggtatggccatgtttctagaccccttcatcagaaacgcctg acctttgcatcagtcatgaccctcctttgtctcctgtcggttctgccggagttgatccatgacccaatgacctcagggat cttgactgaaccaagaagttcccttggagagacaactctatgcatggtattcaaggctgtaactatcttcatattccagc ttcaatctctggctatcgggggtgagtcattagcccccgcggagagggcccgcaacctgggcgtcctcctggatgctcgg ctgtctttagacgatcatgtgacggccgtggccaggggggcttttcatcaggctcgcctgatacgccagttgcgcccctt tctggatcaggacgccctacgcacagtcactcaagccctcgttgtttcccgcctggactattgcaatgctctctacatgg ggctccccttgaggtgcacccggaggctccagctagttcagaatgcggctgcgtgggggattttgggggcctctagatgc tcccatgtaacacctctcctgcacgagctgcactggctgccggtggccttccgggtgcgcttcaaggtgttagtaacaac ttttaaagcgctccatggcaatggacccagatgctactgtggtgccttccagttatctatatctgactggactatatccc tagtcagcatggacaatggctaggattcatggaaatagtcatccacaataaccatgcatccttaagtgtcagactttgaa tgtataagatcacaatgtactgaactgtaaatgtatgatgtatttaaaaaaaaataaggtattttatttatttattatta tatttatatagttgcccatcttgtactaaactctgggcagctcacaaccaacagataaaaccacatatatgtacaataaa aattttttaaaacaaaaaatat |
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Protein
| Protein ID | habu1_s186_g01034.t1 |
|---|---|
| Definition | - |
>habu1_s186_g01034.t1 MYLTRGKLRVGGVENTKPPDGEISGVRQRKVKHAVSGTPKDAVLRGSPSQPSYGQNISSPCSFYCDLPVGTLSPTQSNMD RRSESPCLRDSPERGSGSPDVKGPPPVKVARLEQNGSPMGARGRLNGSVTKSVGGLMIPVFCVVEQLDTSLEYDNREEHA EFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKLGKWNPLPLTYMTDAPDATVADMLQDVYHVVTLKIQLQSCSKL EDLPAEQWNHATVRNALKELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGRWYKKYKKIKVERVERDNL SEYCVLGQRPMHLPNINQLATLGKTNEQSPHGQIHHSTPIRNQVPTLQPIMSPGLLTPQLSPQLVRQQIAMAHLINQQIA AKTSTPTTDLPIKVDGANINITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCTIR RFLNLPQHERDLIYEEESRHHHSERMQHVVQLTPEPVQVLHRQQSQPAKENSPPREEAPPPPAEDASTKKPRSRTKISLE ALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGKLKEHLGTVVDVAEYKDEELLTESEENDNS FSQTSSQRQGKAAQEEIAPTPISLDNNDLTVVLFSFPCASLDPGLEEVFEESESGAEFSTTVLEDRTGNNGFLEQEVLCT LKACILKEKPPLSCTVLLGPGYGHVSRPLHQKRLTFASVMTLLCLLSVLPELIHDPMTSGILTEPRSSLGETTLCMVFKA VTIFIFQLQSLAIGGESLAPAERARNLGVLLDARLSLDDHVTAVARGAFHQARLIRQLRPFLDQDALRTVTQALVVSRLD YCNALYMGLPLRCTRRLQLVQNAAAWGILGASRCSHVTPLLHELHWLPVAFRVRFKVLVTTFKALHGNGPRCYCGAFQLS ISDWTISLVSMDNG |
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| Protein ID | habu1_s186_g01034.t2 |
| Definition | - |
>habu1_s186_g01034.t2 MYLTRGKLRVGGVENTKPPDGEISGVRQRKVKHAVSGTPKDAVLRGSPSQPSYGQNISSPCSFYCDLPVGTLSPTQSNMD RRSESPCLRDSPERGSGSPDVKGPPPVKVARLEQNGSPMGARGRLNGSVTKSVGGLMIPVFCVVEQLDTSLEYDNREEHA EFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKLGKWNPLPLTYMTDAPDATVADMLQDVYHVVTLKIQLQSCSKL EDLPAEQWNHATVRNALKELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGRWYKKYKKIKVERVERDNL SEYCVLGQRPMHLPNINQLATLGKTNEQSPHGQIHHSTPIRNQVPTLQPIMSPGLLTPQLSPQLVRQQIAMAHLINQQIA AKTSTPTTDLPIKVDGANINITAAIYDEIQQEMKRAKVSQALFAKVAANKSQMLTFFCTEDVDSFSQTSSQRQGKAAQEE IAPTPISLDNNDLTVVLFSFPCASLDPGLEEVFEESESGAEFSTTVLEDRTGNNGFLEQEVLCTLKACILKEKPPLSCTV LLGPGYGHVSRPLHQKRLTFASVMTLLCLLSVLPELIHDPMTSGILTEPRSSLGETTLCMVFKAVTIFIFQLQSLAIGGE SLAPAERARNLGVLLDARLSLDDHVTAVARGAFHQARLIRQLRPFLDQDALRTVTQALVVSRLDYCNALYMGLPLRCTRR LQLVQNAAAWGILGASRCSHVTPLLHELHWLPVAFRVRFKVLVTTFKALHGNGPRCYCGAFQLSISDWTISLVSMDNG |
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