Gene
| Gene Model ID | habu1_s186_g01036 |
|---|---|
| Locus | habu1_scaffold186 : 1422294 ... 1437187 : - |
| To GenomeBrowser | habu1_scaffold186:1422294..1437187 |
| Genes list of scaffold | habu1_scaffold186 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| trna wybutosine-synthesizing protein 5 | EC:1.14.11.0 GO:0000049 GO:0005506 GO:0016706 GO:0031591 GO:0042803 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s186_g01036.t2 | 1 | 1 | Cupin_8 | 68 | 204 | 1.4e-33 | 116.4 | 3.5e-37 | 1.7e-33 | 116.1 |
| habu1_s186_g01036.t2 | 1 | 1 | Cupin_4 | 70 | 199 | 2.7e-07 | 30.1 | 8.3e-11 | 4.1e-07 | 29.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s186_g01036.t2 | gi|637250002|ref|XP_008111964.1| | PREDICTED: tRNA wybutosine-synthesizing protein 5 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s186_g01036.t2 | gi|530647582|ref|XP_005310390.1| | PREDICTED: tRNA wybutosine-synthesizing protein 5 isoform X2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.2 |
| Venom grand-1 | 8.7 |
| Pit, infrared sensing | 4.3 |
| Nose | 5.5 |
| Brain-1 | 7.5 |
| Eye | 5.2 |
| fetal fibroblast | 9.4 |
| venom gland-2 | 5.1 |
| Brain-2 | 7.3 |
| Spleen | 4.9 |
| Lung | 5.2 |
| Liver | 3.1 |
| Kidney | 4.8 |
| Pancreas | 5.2 |
| Small intestine | 5.1 |
| Large intestine | 4.7 |
| Stomach | 5.3 |
| heart | 7.7 |
| ovary | 21.5 |
| cheek muscle | 9.5 |
Transcript
| Transcript ID | habu1_s186_g01036.t1 |
|---|---|
| Definition | - |
>habu1_s186_g01036.t1 ggacccaaaggaggaagtgaccgagcggcggttgcttagatttgagcggggacatggagaggcagcgagtcccgcaatac accggagtgactcgggagcgttttttgcaggacatctatcccctgagaaagcctgcagtactgaaaggaatagatctggg cccttgtgtgaccaaatggacagtagattacctttgtcaagcatcaggaaaaaaagaagtaaaggttcacgtttctgctg tgccacagatgaacttccttagtaagaactttgtgtatagaacactgccttttgatgtatttgtaaagagagcagctgaa atcaagcattcggattattttctttctgaggatgaaaagtattatttacgatcactaggagatgatccccgaaaggatat tgcagatctgagaaagcagtttcctttgttggcagatgacattcaaattccagaatactttgataaggaacagtttttct ctactgtcttccgaataagttcagaaggtctacaactttggacacactatgatataatggataacttcttaattcaggtg acgggaaagaaacaagttgtactgttcagcccccgtgatgcaccatatttatatttatcaggcacaaagtctgaggtact agatgtggataaaccaaacatgaagaaatatcctctctttatcaaggctagtcgttatgaatgtcagctggatgctggag atgtcttattcattcctgccttgtggttccataatgtgacttctgaggaatttggagttggagtcaatgttttctggaag cagcttccttctgaatactatgataaaacagatacgtatggaaacaaagatctcactgcagcctcaagagcaatgcagat tttggacagagcactaaaaaacctggaagaacttcctgaggaatacagagacttctatggtagaagaatggcattacgca tccaagaaaaaacttacagcagtaattatgaataaaaaacatttttgaatacttaacagttgttctgagaaatatatatg ttaaactctttcttgtgaaccaattaataggatggccactggtttacgtaccatttaagccagacacatactgctaaaat gtcgtattatttgtgaacataatatacgggtatgctaaggagataaacagtaagattatgcatcaatctggatttgaaga gataatgtgcatatctaatgatgttggcacatccttaaatgtgttttccaagaagctcagaaaaggcacaatttttaagg atttgcagacatttctaatgagtttggagttaataaactgtgaaggtagtacaacaatctcttcagtgtttatttttttt atttactctgtagttataccttgagcaggtataaaaatcttgtaagaaattttttttgcagaaattgcaacgtatggttt tcgctactttgcaacattgcttttcagtagaataagtactttagtttgcaaagagttgttctttcatctaacactcctgt atcataaatatgtaactatccaataaaaaaaaccagattgtgtattttg |
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| Transcript ID | habu1_s186_g01036.t2 |
| Definition | - |
>habu1_s186_g01036.t2 ctcgggagcgttttttgcaggacatctatcccctgagaaagcctgcagtactgaaaggaatagatctgggcccttgtgtg accaaatggacagtagattacctttgtcaagcatcaggaaaaaaagaagtaaaggttcacgtttctgctgtgccacagat gaacttccttaaacactgccttttgatgtatttgtaaagagagcagctgaaatcaagcattcggattattttctttctga ggatgaaaagtattatttacgatcactaggagatgatccccgaaaggatattgcagatctgagaaagcagtttcctttgt tggcagatgacattcaaattccagaatactttgataaggaacagtttttctctactgtcttccgaataagttcagaaggt ctacaactttggacacactatgatataatggataacttcttaattcaggtgacgggaaagaaacaagttgtactgttcag cccccgtgatgcaccatatttatatttatcaggcacaaagtctgaggtactagatgtggataaaccaaacatgaagaaat atcctctctttatcaaggctagtcgttatgaatgtcagctggatgctggagatgtcttattcattcctgccttgtggttc cataatgtgacttctgaggaatttggagttggagtcaatgttttctggaagcagcttccttctgaatactatgataaaac agatacgtatggaaacaaagatctcactgcagcctcaagagcaatgcagattttggacagagcactaaaaaacctggaag aacttcctgaggaatacagagacttctatggtagaagaatggcattacgcatccaagaaaaaacttacagcagtaattat gaataaaaaacatttttgaatacttaacagttgttctgagaaatatatatgttaaactctttcttgtgaaccaattaata ggatggccactggtttacgtaccatttaagccagacacatactgctaaaatgtcgtattatttgtgaacataatatacgg gtatgctaaggagataaacagtaagattatgcatcaatctggatttgaagagataatgtgcatatctaatgatgttggca catccttaaatgtgttttccaagaagctcagaaaaggcacaatttttaaggatttgcagacatttctaatgagtttggag ttaataaactgtgaaggtagtacaacaatctcttcagtgtttattttttttatttactctgtagttataccttgagcagg tataaaaatcttgtaagaaattttttttgcagaaattgcaacgtatggttttcgctactttgcaacattgcttttcagta gaataagtactttagtttgcaaagagttgttctttcatctaacactcctgtatcataaatatgtaactatccaataaaaa aaaccagattgtgtattttg |
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Protein
| Protein ID | habu1_s186_g01036.t1 |
|---|---|
| Definition | - |
>habu1_s186_g01036.t1 MERQRVPQYTGVTRERFLQDIYPLRKPAVLKGIDLGPCVTKWTVDYLCQASGKKEVKVHVSAVPQMNFLSKNFVYRTLPF DVFVKRAAEIKHSDYFLSEDEKYYLRSLGDDPRKDIADLRKQFPLLADDIQIPEYFDKEQFFSTVFRISSEGLQLWTHYD IMDNFLIQVTGKKQVVLFSPRDAPYLYLSGTKSEVLDVDKPNMKKYPLFIKASRYECQLDAGDVLFIPALWFHNVTSEEF GVGVNVFWKQLPSEYYDKTDTYGNKDLTAASRAMQILDRALKNLEELPEEYRDFYGRRMALRIQEKTYSSNYE |
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| Protein ID | habu1_s186_g01036.t2 |
| Definition | - |
>habu1_s186_g01036.t2 MDSRLPLSSIRKKRSKGSRFCCATDELPXTLPFDVFVKRAAEIKHSDYFLSEDEKYYLRSLGDDPRKDIADLRKQFPLLA DDIQIPEYFDKEQFFSTVFRISSEGLQLWTHYDIMDNFLIQVTGKKQVVLFSPRDAPYLYLSGTKSEVLDVDKPNMKKYP LFIKASRYECQLDAGDVLFIPALWFHNVTSEEFGVGVNVFWKQLPSEYYDKTDTYGNKDLTAASRAMQILDRALKNLEEL PEEYRDFYGRRMALRIQEKTYSSNYE |
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