Gene
| Gene Model ID | habu1_s186_g01037 |
|---|---|
| Locus | habu1_scaffold186 : 1437488 ... 1444532 : + |
| To GenomeBrowser | habu1_scaffold186:1437488..1444532 |
| Genes list of scaffold | habu1_scaffold186 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s186_g01037.t1 | 1 | 1 | Tim44 | 96 | 150 | 1.7e-06 | 28.0 | 7.8e-10 | 2.9e-06 | 27.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s186_g01037.t1 | gi|602652007|ref|XP_007432383.1| | PREDICTED: uncharacterized protein C2orf47 homolog, mitochondrial, partial [Python bivittatus] | 0.0 |
| habu1_s186_g01037.t1 | gi|327260776|ref|XP_003215209.1| | PREDICTED: uncharacterized protein C2orf47 homolog, mitochondrial isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s186_g01037.t1 | gi|363735932|ref|XP_421922.3| | PREDICTED: uncharacterized protein C2orf47 homolog, mitochondrial [Gallus gallus] | 0.0 |
| habu1_s186_g01037.t1 | gi|556956711|ref|XP_005989577.1| | PREDICTED: uncharacterized protein C2orf47 homolog, mitochondrial [Latimeria chalumnae] | 0.0 |
| habu1_s186_g01037.t1 | gi|560927729|ref|XP_006190027.1| | PREDICTED: uncharacterized protein C2orf47 homolog, mitochondrial [Camelus ferus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 11.5 |
| Venom grand-1 | 8.8 |
| Pit, infrared sensing | 8.9 |
| Nose | 8.8 |
| Brain-1 | 5.6 |
| Eye | 11.0 |
| fetal fibroblast | 23.5 |
| venom gland-2 | 11.9 |
| Brain-2 | 5.4 |
| Spleen | 7.6 |
| Lung | 7.3 |
| Liver | 15.7 |
| Kidney | 10.2 |
| Pancreas | 15.8 |
| Small intestine | 6.6 |
| Large intestine | 8.1 |
| Stomach | 8.7 |
| heart | 15.3 |
| ovary | 73.6 |
| cheek muscle | 14.8 |
Transcript
| Transcript ID | habu1_s186_g01037.t1 |
|---|---|
| Definition | - |
>habu1_s186_g01037.t1 gatgggagtgccgaggcggggagttatggggctgacccggggagtcctctgcaggcgctgctgctggcagctgcgggggc tccccgccctcccgagaagctcctccgcttcaaccgcccgacgcggaggggtcggacaactcttggctccctctggccgc tgcccgtttctgctgctgccctccgcgcgcttttatagcagcggccccggtgactccaggtcggaggagcgggcggtgtt cctggggttccccaaccccttgaggtggctccgcactcgcctctacttcttcctcatccgcacctactttgaccgcgact tcagcatccaggagttcatgcaaggggcgaagcacgcctttactgttgtttcaaggttaatttctcagtgtaaatatgat gtattggaagaacttgtatcgaaagagatgattcaggtgttaaaagagaagatttcttcattgtctgaaaaccacagaaa agctctggctgcggagatggatgaaattatgttcacagcagcaggagatgtgggcatttactatgatgacagtggcagga agtttgttagtatcctgatgtccttctggtatctgagcagtgctgatatccctgataagactccagaaggagccaaagta ttccagattgcgcttagaggtgaaagcacaccaaaaagaagacatcttttattagcaaactacgagtttcgaagagaatt cacacagggtgtgaagccagactggatgattacttggattgaacacccaaacctattggaataagttcccagaacagaga ctgtcatatactagtaatattttgacatatcaacagacatctcaggatttgtatgccacaatacatagtggactaatttt ttgagtt |
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Protein
| Protein ID | habu1_s186_g01037.t1 |
|---|---|
| Definition | - |
>habu1_s186_g01037.t1 MGLTRGVLCRRCCWQLRGLPALPRSSSASTARRGGVGQLLAPSGRCPFLLLPSARFYSSGPGDSRSEERAVFLGFPNPLR WLRTRLYFFLIRTYFDRDFSIQEFMQGAKHAFTVVSRLISQCKYDVLEELVSKEMIQVLKEKISSLSENHRKALAAEMDE IMFTAAGDVGIYYDDSGRKFVSILMSFWYLSSADIPDKTPEGAKVFQIALRGESTPKRRHLLLANYEFRREFTQGVKPDW MITWIEHPNLLE |
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