Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s186_g01040
Locus habu1_scaffold186 : 1557009 ... 1565827 : -
To GenomeBrowser habu1_scaffold186:1557009..1565827
Genes list of scaffold habu1_scaffold186

Annotation by Blast2GO
Annotation GO
btb poz domain-containing protein kctd18 GO:0051260

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s186_g01040.t4 1 1 BTB_2 13 97 1.0e-13 51.3 3.5e-17 5.2e-13 49.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 1.7
Venom grand-1 3.6
Pit, infrared sensing 2.1
Nose 1.8
Brain-1 1.9
Eye 1.9
fetal fibroblast 4.2
venom gland-2 2.0
Brain-2 1.8
Spleen 2.4
Lung 4.0
Liver 1.9
Kidney 2.7
Pancreas 3.1
Small intestine 2.8
Large intestine 2.6
Stomach 2.9
heart 4.2
ovary 8.3
cheek muscle 5.6

Transcript
Transcript IDhabu1_s186_g01040.t1
Definition-
>habu1_s186_g01040.t1
agcgcgaaaggaggcggggtttcgcgtgcctctcccgaaatttctgggcggaacctcggactagaaaggtatcaaaatac
ataatctaatcaacaatattaactgcagaagtgatggatgacagcaagtctgaaaagatggtagatattattcgactgaa
tgttggaggctttatgtacacagctagatgtgaatctttatgccgttttaaggattcaatgttagcagctatgttcagtg
gaaggtttcctttaaaaatggataattcaggagcatgccttattgatcgtgatggcaatctttttaaatatctcttaaat
tatcttcatggagaagtttggattcctgaaaatgaggaaacacgaattgcattacaagaagaagctgattactttggcat
tccttatccttacagtcttgttgaccatctagctaatgaaatggagacatattgtttaagaacaaatgtagaacttaaga
aggcactcgtaggtttttgtgactcttatgacttaatatgcactaaaccaacagtttgggtcttgcattacctcaatact
tctggtgccagctgtgagagtagagtaattggaatatatgccacaaaagctgatggaacaactgcaattgaaaaggaact
aggaggacgaataaatagtaaaaatatctacaaaagagaggctggaaacaacatccagtacatttggagttactattcag
taacagaattgaagaagataatggatgcatttgaggcttgggaaggaagaggtgccagctactggcgagtaccacaggag
ctgatagagtgttggactcttgaggagcattctttgaaaggaagccttcaaaatatgtctccagtacgtaaacgacgaat
aattgattctcctggtgaggaagaaagacaactgaatagcagaacagctcgaaagccagttcaattctctggcccctcta
caagtacctgcatcaaagttaaaaactcagcttctttaaagataacagcatcttcacatccccaaacggctcttaagtgt
cctagcaacaatacttctttaataagcaaaaagatttcgagaactctttatgcaaggactgtcccattgactaaaaattc
tcaggcctctcttagaaacgctgaccgcgggggagttggccaaatgatcccaaagtctccctcgtctagaaagtttgcaa
ccggtcgggtgatcaaactgaagcggactccactttgtaatgaatcagttgtgaagaaagttaaacagcaatttccatct
actgcaattgctactacttctacaggtcactcaaactgtgagcattcggccctttccctgaggtgcagtactaacagaga
tggtctccaggatagctagctgagtggtgatgtgtaagactgatctctttaagatcgttattttttaacaacaaaacctt
ttacctcttgagaggtaaaacaatcccaggttccacagaaatattctaataaaatcctctaagatggtggatggtagtca
gttggtgttcatttttgtaatgtacattataaataattacgaagtataattaaatgtggaacattggttattttag
Transcript IDhabu1_s186_g01040.t2
Definition-
>habu1_s186_g01040.t2
tgtttcctggggcttcctccttggcctcgcctccctctgatccctttgtgctcccgggttcctcttcctcctcttcctct
tcctcctcctccagccgctgctgttttctggctgtagaagaaggaagggactggcttgggtttccttcctccctcctgcc
ggatgctacgtgttcttccctgccctcggaaacgtacataaaagaggaaaaggagacagcttgactgacttagcagggga
gtcttcaaataagattgcaaaaatccagccaaccaccagatggcagctaagaggcagaaaattataactccttgctggct
tttcggagctgtccgcatttttgtcggatagctttgttcctagggatagctggacttaactttatgtgatggtgatactt
agcaggtttctaaggaatcttggctgccgatctgtaaactgtctggattcttcccaatgtagaaaagctgatgtcctcca
actgtttaatacaacagctctgtactctttgactattggacatggttaaggtaaagaatccagcttgcctggccaaaatc
catacttcaaattgtacagcatttgtacagtttgtcattgtttgttccaaattccctcttggatcttagaattttagaag
ggagagaaacgctatcgctggatctagcaaagaactctgctgtttaatttggacctaatttgtatcagaaacattaataa
catggcaaagctctctaggaggcctatctcatttggacaatttcattggacctagacattcttttccatttctagtcccc
tcgtgttttctcatggcacaatatatttggaagaagaggaataggagcccatatattgaagtactcatgaagatgttttg
ttattatttgctaaacaagtttataaaccaggctgtttttatggatagcaggctattattcaatgtatttgtctagaaaa
gtcatagagcatgcacatttatttgattcataaatcacacttgcacagcagctcaaggaggtgtacaaagtgctggcctc
tattttccccccacaatggcactcctacaagggctccctagcttgggtgatctcttctgaaaggaggttctaataaaaac
atatgtagctcttggcatttagcattttgatgaaaactctgctatggttcacaatcttactatgcctcttttattcaggt
atcaaaatacataatctaatcaacaatattaactgcagaagtgatggatgacagcaagtctgaaaagatggtagatatta
ttcgactgaatgttggaggctttatgtacacagctagatgtgaatctttatgccgttttaaggattcaatgttagcagct
atgttcagtggaaggtttcctttaaaaatggataattcaggagcatgccttattgatcgtgatggcaatctttttaaata
tctcttaaattatcttcatggagaagtttggattcctgaaaatgaggaaacacgaattgcattacaagaagaagctgatt
actttggcattccttatccttacagtcttgttgaccatctagctaatgaaatggagacatattgtttaagaacaaatgta
gaacttaagaaggcactcgtaggtttttgtgactcttatgacttaatatgcactaaaccaacagtttgggtcttgcatta
cctcaatacttctggtgccagctgtgagagtagagtaattggaatatatgccacaaaagctgatggaacaactgcaattg
aaaaggaactaggaggacgaataaatagtaaaaatatctacaaaagagaggctggaaacaacatccagtacatttggagt
tactattcagtaacagaattgaagaagataatggatgcatttgaggcttgggaaggaagaggtgccagctactggcgagt
accacaggagctgatagagtgttggactcttgaggagcattctttgaaaggaagccttcaaaatatgtctccagtacgta
aacgacgaataattgattctcctggtgaggaagaaagacaactgaatagcagaacagctcgaaagccagttcaattctct
ggcccctctacaagtacctgcatcaaagttaaaaactcagcttctttaaagataacagcatcttcacatccccaaacggc
tcttaagtgtcctagcaacaatacttctttaataagcaaaaagatttcgagaactctttatgcaaggactgtcccattga
ctaaaaattctcaggcctctcttagaaacgctgaccgcgggggagttggccaaatgatcccaaagtctccctcgtctaga
aagtttgcaaccggtcgggtgatcaaactgaagcggactccactttgtaatgaatcagttgtgaagaaagttaaacagca
atttccatctactgcaattgctactacttctacaggtcactcaaactgtgagcattcggccctttccctgaggtgcagta
ctaacagagatggtctccaggatagctagctgagtggtgatgtgtaagactgatctctttaagatcgttattttttaaca
acaaaaccttttacctcttgagaggtaaaacaatcccaggttccacagaaatattctaataaaatcctctaagatggtgg
atggtagtcagttggtgttcatttttgtaatgtacattataaataattacgaagtataattaaatgtggaacattggtta
ttttag
Transcript IDhabu1_s186_g01040.t3
Definition-
>habu1_s186_g01040.t3
tgtttcctggggcttcctccttggcctcgcctccctctgatccctttgtgctcccgggttcctcttcctcctcttcctct
tcctcctcctccagccgctgctgttttctggctgtagaagaaggaagggactggcttgggtttccttcctccctcctgcc
ggatgctacgtgttcttccctgccctcggaaacgtacataaaagaggaaaaggagacagcttgactgacttagcagggga
gtcttcaaataagattgcaaaaatccagccaaccaccagatggcagctaagaggcagaaaattataactccttgctggct
tttcggagctgtccgcatttttgtcggatagctttgttcctagggatagctggacttaactttatgtgatggtgatactt
agcaggtttctaaggaatcttggctgccgatctgtaaactgtctggattcttcccaatgtagaaaagctgatgtcctcca
actgtttaatacaacagctctgtactctttgactattggacatggttaaggtatcaaaatacataatctaatcaacaata
ttaactgcagaagtgatggatgacagcaagtctgaaaagatggtagatattattcgactgaatgttggaggctttatgta
cacagctagatgtgaatctttatgccgttttaaggattcaatgttagcagctatgttcagtggaaggtttcctttaaaaa
tggataattcaggagcatgccttattgatcgtgatggcaatctttttaaatatctcttaaattatcttcatggagaagtt
tggattcctgaaaatgaggaaacacgaattgcattacaagaagaagctgattactttggcattccttatccttacagtct
tgttgaccatctagctaatgaaatggagacatattgtttaagaacaaatgtagaacttaagaaggcactcgtaggttttt
gtgactcttatgacttaatatgcactaaaccaacagtttgggtcttgcattacctcaatacttctggtgccagctgtgag
agtagagtaattggaatatatgccacaaaagctgatggaacaactgcaattgaaaaggaactaggaggacgaataaatag
taaaaatatctacaaaagagaggctggaaacaacatccagtacatttggagttactattcagtaacagaattgaagaaga
taatggatgcatttgaggcttgggaaggaagagtgaatttcaggtagaagttaccaaatttatgcatcttgaatattgtg
aaatgatatgtttgaaattacaaggtgccagctactggcgagtaccacaggagctgatagagtgttggactcttgaggag
cattctttgaaaggaagccttcaaaatatgtctccagtacgtaaacgacgaataattgattctcctggtgaggaagaaag
acaactgaatagcagaacagctcgaaagccagttcaattctctggcccctctacaagtacctgcatcaaagttaaaaact
cagcttctttaaagataacagcatcttcacatccccaaacggctcttaagtgtcctagcaacaatacttctttaataagc
aaaaagatttcgagaactctttatgcaaggactgtcccattgactaaaaattctcaggcctctcttagaaacgctgaccg
cgggggagttggccaaatgatcccaaagtctccctcgtctagaaagtttgcaaccggtcgggtgatcaaactgaagcgga
ctccactttgtaatgaatcagttgtgaagaaagttaaacagcaatttccatctactgcaattgctactacttctacaggt
cactcaaactgtgagcattcggccctttccctgaggtgcagtactaacagagatggtctccaggatagctagctgagtgg
tgatgtgtaagactgatctctttaagatcgttattttttaacaacaaaaccttttacctcttgagaggtaaaacaatccc
aggttccacagaaatattctaataaaatcctctaagatggtggatggtagtcagttggtgttcatttttgtaatgtacat
tataaataattacgaagtataattaaatgtggaacattggttattttag
Transcript IDhabu1_s186_g01040.t4
Definition-
>habu1_s186_g01040.t4
tgtttcctggggcttcctccttggcctcgcctccctctgatccctttgtgctcccgggttcctcttcctcctcttcctct
tcctcctcctccagccgctgctgttttctggctgtagaagaaggaagggactggcttgggtttccttcctccctcctgcc
ggatgctacgtgttcttccctgccctcggaaacgtacataaaagaggaaaaggagacagcttgactgacttagcagggga
gtcttcaaataagattgcaaaaatccagccaaccaccagatggcagctaagaggcagaaaattataactccttgctggct
tttcggagctgtccgcatttttgtcggatagctttgttcctagggatagctggacttaactttatgtgatggtgatactt
agcaggtttctaaggaatcttggctgccgatctgtaaactgtctggattcttcccaatgtagaaaagctgatgtcctcca
actgtttaatacaacagctctgtactctttgactattggacatggttaaggtatcaaaatacataatctaatcaacaata
ttaactgcagaagtgatggatgacagcaagtctgaaaagatggtagatattattcgactgaatgttggaggctttatgta
cacagctagatgtgaatctttatgccgttttaaggattcaatgttagcagctatgttcagtggaaggtttcctttaaaaa
tggataattcaggagcatgccttattgatcgtgatggcaatctttttaaatatctcttaaattatcttcatggagaagtt
tggattcctgaaaatgaggaaacacgaattgcattacaagaagaagctgattactttggcattccttatccttacagtct
tgttgaccatctagctaatgaaatggagacatattgtttaagaacaaatgtagaacttaagaaggcactcgtaggttttt
gtgactcttatgacttaatatgcactaaaccaacagtttgggtcttgcattacctcaatacttctggtgccagctgtgag
agtagagtaattggaatatatgccacaaaagctgatggaacaactgcaattgaaaaggaactaggaggacgaataaatag
taaaaatatctacaaaagagaggctggaaacaacatccagtacatttggagttactattcagtaacagaattgaagaaga
taatggatgcatttgaggcttgggaaggaagaggtgccagctactggcgagtaccacaggagctgatagagtgttggact
cttgaggagcattctttgaaaggaagccttcaaaatatgtctccagtacgtaaacgacgaataattgattctcctggtga
ggaagaaagacaactgaatagcagaacagctcgaaagccagttcaattctctggcccctctacaagtacctgcatcaaag
ttaaaaactcagcttctttaaagataacagcatcttcacatccccaaacggctcttaagtgtcctagcaacaatacttct
ttaataagcaaaaagatttcgagaactctttatgcaaggactgtcccattgactaaaaattctcaggcctctcttagaaa
cgctgaccgcgggggagttggccaaatgatcccaaagtctccctcgtctagaaagtttgcaaccggtcgggtgatcaaac
tgaagcggactccactttgtaatgaatcagttgtgaagaaagttaaacagcaatttccatctactgcaattgctactact
tctacaggtcactcaaactgtgagcattcggccctttccctgaggtgcagtactaacagagatggtctccaggatagcta
gctgagtggtgatgtgtaagactgatctctttaagatcgttattttttaacaacaaaaccttttacctcttgagaggtaa
aacaatcccaggttccacagaaatattctaataaaatcctctaagatggtggatggtagtcagttggtgttcatttttgt
aatgtacattataaataattacgaagtataattaaatgtggaacattggttattttag

Protein
Protein IDhabu1_s186_g01040.t1
Definition-
>habu1_s186_g01040.t1
MDDSKSEKMVDIIRLNVGGFMYTARCESLCRFKDSMLAAMFSGRFPLKMDNSGACLIDRDGNLFKYLLNYLHGEVWIPEN
EETRIALQEEADYFGIPYPYSLVDHLANEMETYCLRTNVELKKALVGFCDSYDLICTKPTVWVLHYLNTSGASCESRVIG
IYATKADGTTAIEKELGGRINSKNIYKREAGNNIQYIWSYYSVTELKKIMDAFEAWEGRGASYWRVPQELIECWTLEEHS
LKGSLQNMSPVRKRRIIDSPGEEERQLNSRTARKPVQFSGPSTSTCIKVKNSASLKITASSHPQTALKCPSNNTSLISKK
ISRTLYARTVPLTKNSQASLRNADRGGVGQMIPKSPSSRKFATGRVIKLKRTPLCNESVVKKVKQQFPSTAIATTSTGHS
NCEHSALSLRCSTNRDGLQDS
Protein IDhabu1_s186_g01040.t2
Definition-
>habu1_s186_g01040.t2
MDDSKSEKMVDIIRLNVGGFMYTARCESLCRFKDSMLAAMFSGRFPLKMDNSGACLIDRDGNLFKYLLNYLHGEVWIPEN
EETRIALQEEADYFGIPYPYSLVDHLANEMETYCLRTNVELKKALVGFCDSYDLICTKPTVWVLHYLNTSGASCESRVIG
IYATKADGTTAIEKELGGRINSKNIYKREAGNNIQYIWSYYSVTELKKIMDAFEAWEGRGASYWRVPQELIECWTLEEHS
LKGSLQNMSPVRKRRIIDSPGEEERQLNSRTARKPVQFSGPSTSTCIKVKNSASLKITASSHPQTALKCPSNNTSLISKK
ISRTLYARTVPLTKNSQASLRNADRGGVGQMIPKSPSSRKFATGRVIKLKRTPLCNESVVKKVKQQFPSTAIATTSTGHS
NCEHSALSLRCSTNRDGLQDS
Protein IDhabu1_s186_g01040.t3
Definition-
>habu1_s186_g01040.t3
MDDSKSEKMVDIIRLNVGGFMYTARCESLCRFKDSMLAAMFSGRFPLKMDNSGACLIDRDGNLFKYLLNYLHGEVWIPEN
EETRIALQEEADYFGIPYPYSLVDHLANEMETYCLRTNVELKKALVGFCDSYDLICTKPTVWVLHYLNTSGASCESRVIG
IYATKADGTTAIEKELGGRINSKNIYKREAGNNIQYIWSYYSVTELKKIMDAFEAWEGRVNFR
Protein IDhabu1_s186_g01040.t4
Definition-
>habu1_s186_g01040.t4
MDDSKSEKMVDIIRLNVGGFMYTARCESLCRFKDSMLAAMFSGRFPLKMDNSGACLIDRDGNLFKYLLNYLHGEVWIPEN
EETRIALQEEADYFGIPYPYSLVDHLANEMETYCLRTNVELKKALVGFCDSYDLICTKPTVWVLHYLNTSGASCESRVIG
IYATKADGTTAIEKELGGRINSKNIYKREAGNNIQYIWSYYSVTELKKIMDAFEAWEGRGASYWRVPQELIECWTLEEHS
LKGSLQNMSPVRKRRIIDSPGEEERQLNSRTARKPVQFSGPSTSTCIKVKNSASLKITASSHPQTALKCPSNNTSLISKK
ISRTLYARTVPLTKNSQASLRNADRGGVGQMIPKSPSSRKFATGRVIKLKRTPLCNESVVKKVKQQFPSTAIATTSTGHS
NCEHSALSLRCSTNRDGLQDS

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