Gene
| Gene Model ID | habu1_s188_g01043 |
|---|---|
| Locus | habu1_scaffold188 : 49336 ... 63508 : + |
| To GenomeBrowser | habu1_scaffold188:49336..63508 |
| Genes list of scaffold | habu1_scaffold188 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| acidic leucine-rich nuclear phosphoprotein 32 family member a isoform x1 | GO:0016363 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s188_g01043.t1 | 1 | 1 | LRR_9 | 39 | 154 | 6.7e-11 | 42.0 | 5.7e-14 | 9.4e-11 | 41.5 |
| habu1_s188_g01043.t1 | 2 | 1 | LRR_4 | 44 | 84 | 5.5e-12 | 45.0 | 1.6e-06 | 0.0027 | 17.3 |
| habu1_s188_g01043.t1 | 2 | 1 | LRR_8 | 62 | 100 | 8.8e-13 | 47.8 | 1.8e-09 | 3.0e-06 | 26.9 |
| habu1_s188_g01043.t1 | 1 | 1 | LRR_6 | 87 | 103 | 1.2e-06 | 27.9 | 2.6e-07 | 0.00042 | 20.0 |
| habu1_s188_g01043.t1 | 2 | 2 | LRR_8 | 88 | 146 | 8.8e-13 | 47.8 | 1.3e-11 | 2.2e-08 | 33.7 |
| habu1_s188_g01043.t1 | 2 | 2 | LRR_4 | 88 | 129 | 5.5e-12 | 45.0 | 8.4e-12 | 1.4e-08 | 34.1 |
| habu1_s188_g01043.t1 | 1 | 1 | LRR_1 | 89 | 105 | 2.5e-06 | 26.7 | 9.1e-06 | 0.015 | 15.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s188_g01043.t1 | gi|395822411|ref|XP_003784511.1| | PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member A [Otolemur garnettii] | 0.0 |
| habu1_s188_g01043.t1 | gi|586472063|ref|XP_006866614.1| | PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member A [Chrysochloris asiatica] | 0.0 |
| habu1_s188_g01043.t1 | gi|586530740|ref|XP_006920279.1| | PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member A [Pteropus alecto] | 0.0 |
| habu1_s188_g01043.t1 | gi|466040805|ref|XP_004276287.1| | 0.0 | |
| habu1_s188_g01043.t1 | gi|558203842|ref|XP_006132143.1| | PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X1 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 31.4 |
| Venom grand-1 | 72.2 |
| Pit, infrared sensing | 32.8 |
| Nose | 33.6 |
| Brain-1 | 27.3 |
| Eye | 41.0 |
| fetal fibroblast | 62.5 |
| venom gland-2 | 93.6 |
| Brain-2 | 30.0 |
| Spleen | 46.6 |
| Lung | 63.1 |
| Liver | 59.7 |
| Kidney | 42.2 |
| Pancreas | 54.4 |
| Small intestine | 50.3 |
| Large intestine | 52.9 |
| Stomach | 51.0 |
| heart | 101.8 |
| ovary | 36.5 |
| cheek muscle | 215.0 |
Transcript
| Transcript ID | habu1_s188_g01043.t1 |
|---|---|
| Definition | - |
>habu1_s188_g01043.t1 cgcgttttcccattggtacgccggccgccggcccagcctccctcgtcctccagttggcctcgccgcccgtccctcaaacg ggagtcttttctcgcggagcgcccgcccccgcggcgatcacgctagtgtgcgcgctggttggccgcgttgggggattccg agcgaagctggttgagcgctcaaagtccctcttcgcctcgcgcgctggctttggtcgggggggcgggagggggggtcgcc gctggagccaccggtgtcaatacaaaagagggagcggagcgcggcggagccaggcggcctcccgcggaatcggggacatg gacatgaagaaaaggatccacttagagctgcggaacaggacgccctccgacgtaaaagaacttgttcttgacaactgcag gtcaaatgaaggaaaaattgaaggcctcacagatgaatttgaagagctggaactattaagtacaatcaatgtaggcctca cctcagttgtaaacttaccaaaattaaacaaacttaagaagctcgagttaagtgacaacagaatctcagggggactggaa gtattggcagaaaaatgtccgaacctcacacatctaaacctaagtggcaacaaaataaaggatcttagtacaatagaacc actggagaagttagaaaacctgaagagtttagatcttttcaattgtgaggtcactaacctgaatgactacagagataatg tcttcaaacttctccctcaactcacgtatctggatggctatgatcgaaatgataaagaggcccctgattcggatgcagaa ggctacgtggaagacctagatgatgaagaggaggaggaggatgaagaggactatgatgaagagggtcagttaggatacta tgaattagaggaagaggaggatgtgagtggagaagaggaagatgtgagtggagaagaggaggaggatgaagaggattata aagatggtgaagtagataatgaagaagaggacgaagaagttgatgaagcccggggggagaagagaaaacgggaggccgat gatgaaggcgaggaggaagattaaatgcaaccaaaattggccgtgggagcattccagccgccgccaccgcaggggagcag cagcatcttgataaccaagtgttttcttgttacctgttttgtgaatggctgccgttcccagaaacccttttcttccactt cctatcggtaacatttacttggttgtttgtaaatagtgaccaactatgtaatttctctctcctttctctctctctctccc tcctttttatttggtttgtgggggtgattttgcaaatttttattttaaaaaatctcgtagagcatggctgggcaagctct cctgggatgggaaccgctcaagaatatggcaggatccttgttcagcttccattcctggttggttcgtattctgactattg aggggggtctagagcagttctctgtaaacggcagtcatggaaatatctataaatatatataaaaagtgttcctaatttcc tgagttaactggtgaattgcatttgacagttgtaataaaaaaagaaaatgtttgaaccctt |
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Protein
| Protein ID | habu1_s188_g01043.t1 |
|---|---|
| Definition | - |
>habu1_s188_g01043.t1 MDMKKRIHLELRNRTPSDVKELVLDNCRSNEGKIEGLTDEFEELELLSTINVGLTSVVNLPKLNKLKKLELSDNRISGGL EVLAEKCPNLTHLNLSGNKIKDLSTIEPLEKLENLKSLDLFNCEVTNLNDYRDNVFKLLPQLTYLDGYDRNDKEAPDSDA EGYVEDLDDEEEEEDEEDYDEEGQLGYYELEEEEDVSGEEEDVSGEEEEDEEDYKDGEVDNEEEDEEVDEARGEKRKREA DDEGEEED |
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