Gene
| Gene Model ID | habu1_s188_g01046 |
|---|---|
| Locus | habu1_scaffold188 : 174888 ... 178765 : - |
| To GenomeBrowser | habu1_scaffold188:174888..178765 |
| Genes list of scaffold | habu1_scaffold188 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s188_g01046.t1 | 3 | 1 | Ank_4 | 19 | 62 | 2.8e-27 | 94.5 | 2.9e-12 | 8.6e-09 | 35.6 |
| habu1_s188_g01046.t1 | 3 | 1 | Ank_2 | 22 | 97 | 8.8e-36 | 122.1 | 4.6e-23 | 1.4e-19 | 70.2 |
| habu1_s188_g01046.t1 | 3 | 1 | Ank_5 | 28 | 79 | 1.8e-25 | 88.3 | 1.6e-12 | 4.9e-09 | 36.1 |
| habu1_s188_g01046.t1 | 2 | 1 | Ank_3 | 41 | 70 | 2.5e-24 | 82.9 | 1.3e-10 | 4.0e-07 | 29.6 |
| habu1_s188_g01046.t1 | 5 | 1 | Ank | 42 | 71 | 9.3e-38 | 126.1 | 8.7e-13 | 2.6e-09 | 36.4 |
| habu1_s188_g01046.t1 | 3 | 2 | Ank_4 | 44 | 94 | 2.8e-27 | 94.5 | 5.1e-16 | 1.5e-12 | 47.6 |
| habu1_s188_g01046.t1 | 3 | 2 | Ank_5 | 63 | 96 | 1.8e-25 | 88.3 | 3.0e-09 | 8.8e-06 | 25.8 |
| habu1_s188_g01046.t1 | 2 | 2 | Ank_3 | 75 | 96 | 2.5e-24 | 82.9 | 2.7e-06 | 0.008 | 16.3 |
| habu1_s188_g01046.t1 | 5 | 2 | Ank | 75 | 96 | 9.3e-38 | 126.1 | 5.1e-08 | 0.00015 | 21.3 |
| habu1_s188_g01046.t1 | 3 | 2 | Ank_2 | 76 | 134 | 8.8e-36 | 122.1 | 2.8e-14 | 8.3e-11 | 42.0 |
| habu1_s188_g01046.t1 | 5 | 3 | Ank | 106 | 129 | 9.3e-38 | 126.1 | 2.2e-06 | 0.0066 | 16.2 |
| habu1_s188_g01046.t1 | 5 | 4 | Ank | 371 | 418 | 9.3e-38 | 126.1 | 2.5e-10 | 7.5e-07 | 28.6 |
| habu1_s188_g01046.t1 | 3 | 3 | Ank_2 | 372 | 432 | 8.8e-36 | 122.1 | 1.3e-10 | 4.0e-07 | 30.2 |
| habu1_s188_g01046.t1 | 3 | 3 | Ank_4 | 402 | 432 | 2.8e-27 | 94.5 | 1.7e-08 | 4.9e-05 | 23.7 |
| habu1_s188_g01046.t1 | 3 | 3 | Ank_5 | 406 | 466 | 1.8e-25 | 88.3 | 3.1e-08 | 9.2e-05 | 22.5 |
| habu1_s188_g01046.t1 | 5 | 5 | Ank | 420 | 459 | 9.3e-38 | 126.1 | 3.4e-06 | 0.01 | 15.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s188_g01046.t1 | gi|602662629|ref|XP_007436957.1| | PREDICTED: protein fem-1 homolog B [Python bivittatus] | 0.0 |
| habu1_s188_g01046.t1 | gi|543354371|ref|XP_005521713.1| | PREDICTED: protein fem-1 homolog B [Pseudopodoces humilis] | 0.0 |
| habu1_s188_g01046.t1 | gi|699570479|ref|XP_009874662.1| | PREDICTED: LOW QUALITY PROTEIN: protein fem-1 homolog B, partial [Apaloderma vittatum] | 0.0 |
| habu1_s188_g01046.t1 | gi|683912525|ref|XP_009088447.1| | PREDICTED: protein fem-1 homolog B, partial [Serinus canaria] | 0.0 |
| habu1_s188_g01046.t1 | gi|514760444|ref|XP_005023020.1| | PREDICTED: LOW QUALITY PROTEIN: protein fem-1 homolog B [Anas platyrhynchos] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.3 |
| Venom grand-1 | 6.3 |
| Pit, infrared sensing | 4.6 |
| Nose | 5.7 |
| Brain-1 | 2.1 |
| Eye | 5.8 |
| fetal fibroblast | 6.7 |
| venom gland-2 | 8.1 |
| Brain-2 | 1.7 |
| Spleen | 5.8 |
| Lung | 5.7 |
| Liver | 3.9 |
| Kidney | 6.2 |
| Pancreas | 10.2 |
| Small intestine | 7.6 |
| Large intestine | 6.3 |
| Stomach | 6.0 |
| heart | 4.2 |
| ovary | 13.9 |
| cheek muscle | 8.0 |
Transcript
| Transcript ID | habu1_s188_g01046.t1 |
|---|---|
| Definition | - |
>habu1_s188_g01046.t1 gaggggcctgtgtacagccagacatcccagttgctctctgctcctggcgaaatggattagctacgtcatcgatggagcca cggcattgtggtgtgcagccggggcaggccacttcgaagttgtcaagcttctggctggacatcgtcaagtaccttgtgga gaacaatgccaacatcagcatcgctaacaagtatgacaacacttgccttatgattgctgcttacaagggccacgtcgatg tggtgcgctttcttctagagcagcatgcggatcccaatgccaaagcacactgtggcgctacagcattgcactttgcagct gaggcgggtcacttggagattgtccgagagctggtgaagtggaaatctgccatgatggtgaatggccatggaatgacgcc gctgaaggtagctgcagaaagctgtaaagctgatgttgtggagctgctgttggcacatgcggactgtgaccgcaagagca ggattgaagctttggagctcctgggtgcctcttttgcaaacgaccgggaaaattacgatatcatgaaaacctatcattat ttatatttagccatgctcgagcggtacagagatagcgagaaccttcttgagaaggacatcctgcctcagatagaagctta tggcaaccggacagaatgccggactcctcaagagctggaatccattcgccaggaccgagatgctttgcacatggagggcc tcatcgtccgggagcggatcctgggttctgataatattgatgtatcacatccaattatttaccgcggtgctgtttatgcc gataacatgcagtttgaacagtgcattaagctctggctccatgctttgcatttacgacagaggggcagtaggaataccca caaggaccttctccgatttgctcaagttttctctcagatgatacacttgaatgagcctgtgaaagccaaggacattgaga gcgtcttgagatgtagcgtcctggagatagagcaagggatggccagggtcaaaagttctccagaagctgagcttcacaca gccatggacaactatgaatgcaacatctttaccttcttgtacttggtgtgcatctcaaccaaaacccagtgtagggatga ggaacaatcacgaattaataaacagatttataacttaatccacctggatcccaggacacgagatgggtctagtttgttgc accacgctgttaactccggcacaccagtcgatgacttccacaccaacgatgtctgcagcttccctaacgccctggtcacc aaacttcttctggattgtggtgctgatgtcaatgctgtggacaacgaagggaacactccgttacatgtcatagtgcagta caacaggcccattagtgattttttgaccttgcattcgatcatcattagcttggttgaggctggtgctcacacagatatga caaacaaacagaaaaaaactcctcttgacaaaagtacaacgggggtgtctgaaatcctcttgaagactcagatgaaactg agcctgaagtgcctggctgctcgagctgtgcgggtttatcatatccgttatcacaatcagattcccaagactttggaaga atttgtagaattccactaggccacatctacatggtgataatttcactttccctccatgaagggtcaaataaaatgtcagg cagagagtctgaat |
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Protein
| Protein ID | habu1_s188_g01046.t1 |
|---|---|
| Definition | - |
>habu1_s188_g01046.t1 MEPRHCGVQPGQATSKLSSFWLDIVKYLVENNANISIANKYDNTCLMIAAYKGHVDVVRFLLEQHADPNAKAHCGATALH FAAEAGHLEIVRELVKWKSAMMVNGHGMTPLKVAAESCKADVVELLLAHADCDRKSRIEALELLGASFANDRENYDIMKT YHYLYLAMLERYRDSENLLEKDILPQIEAYGNRTECRTPQELESIRQDRDALHMEGLIVRERILGSDNIDVSHPIIYRGA VYADNMQFEQCIKLWLHALHLRQRGSRNTHKDLLRFAQVFSQMIHLNEPVKAKDIESVLRCSVLEIEQGMARVKSSPEAE LHTAMDNYECNIFTFLYLVCISTKTQCRDEEQSRINKQIYNLIHLDPRTRDGSSLLHHAVNSGTPVDDFHTNDVCSFPNA LVTKLLLDCGADVNAVDNEGNTPLHVIVQYNRPISDFLTLHSIIISLVEAGAHTDMTNKQKKTPLDKSTTGVSEILLKTQ MKLSLKCLAARAVRVYHIRYHNQIPKTLEEFVEFH |
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