Gene
| Gene Model ID | habu1_s188_g01047 |
|---|---|
| Locus | habu1_scaffold188 : 180376 ... 192882 : + |
| To GenomeBrowser | habu1_scaffold188:180376..192882 |
| Genes list of scaffold | habu1_scaffold188 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ceroid-lipofuscinosis neuronal protein 6 | GO:0001573 GO:0005634 GO:0005788 GO:0007042 GO:0007601 GO:0008203 GO:0016020 GO:0030203 GO:0031987 GO:0042803 GO:0044265 GO:0045862 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s188_g01047.t1 | 1 | 1 | CLN6 | 1 | 224 | 0.0 | 421.4 | 0.0 | 0.0 | 421.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s188_g01047.t1 | gi|602662627|ref|XP_007436956.1| | PREDICTED: ceroid-lipofuscinosis neuronal protein 6 [Python bivittatus] | 0.0 |
| habu1_s188_g01047.t1 | gi|637352634|ref|XP_008118637.1| | PREDICTED: ceroid-lipofuscinosis neuronal protein 6 [Anolis carolinensis] | 0.0 |
| habu1_s188_g01047.t1 | gi|701382175|ref|XP_009993438.1| | PREDICTED: ceroid-lipofuscinosis neuronal protein 6 [Chaetura pelagica] | 0.0 |
| habu1_s188_g01047.t1 | gi|701341633|ref|XP_009971977.1| | PREDICTED: ceroid-lipofuscinosis neuronal protein 6, partial [Tyto alba] | 0.0 |
| habu1_s188_g01047.t1 | gi|704325445|ref|XP_010170458.1| | PREDICTED: ceroid-lipofuscinosis neuronal protein 6, partial [Caprimulgus carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.3 |
| Venom grand-1 | 13.7 |
| Pit, infrared sensing | 7.9 |
| Nose | 7.6 |
| Brain-1 | 7.2 |
| Eye | 11.5 |
| fetal fibroblast | 4.9 |
| venom gland-2 | 13.2 |
| Brain-2 | 4.7 |
| Spleen | 9.2 |
| Lung | 10.7 |
| Liver | 9.7 |
| Kidney | 9.7 |
| Pancreas | 11.3 |
| Small intestine | 13.7 |
| Large intestine | 11.0 |
| Stomach | 7.4 |
| heart | 5.8 |
| ovary | 0.8 |
| cheek muscle | 6.9 |
Transcript
| Transcript ID | habu1_s188_g01047.t1 |
|---|---|
| Definition | - |
>habu1_s188_g01047.t1 agttgttattaacatggaaccagaaccggatgtagctgtgccgtcctctgcaaaaccaatccgtcccggaaatcgctgct gagacgaaattgtgcttccacttgaatggtttcccctgaataggccgagcgtcggcgattattttcacatggcctataat gtcatcacaccctttattctcctgaagttgatggagcgctcccccaaggctcttccccgatccatggtgtatctctgcat catcatattcgtcatgggggccagcatccacctggtgggtgactctgtcaatcaccgactgatattcagcggctaccagc tccacctgtccgtccgagagaatccaatcatcaaaaatctcaagccggagaccctgatcgattcctttgaactgctgtac tattacgatgagcatctgggccattcaatgtggtacatacccttctttctcatcctgtgcatatatttttctggctgttt cataccctgtaaagaacaacagccaagaatccctgtggctgctttactcctcattgggcccagcagcctctattactggt acctcgtcacggagggccagatcctcaccctcttcgtcttcaccaccttcgccctggtggcgctcgtgatgcaccagagg cggaagggcctcgtcatggacagcaacggccgcttcctcttctactcctttgtcatcacgctggggctggtggccctctg gattggctggctgtggaacgaccagaccctccggaagaaatatcccgggatcatctacgttcctgagccctgggccttct acaccttgcatctcaggaatctgccctcaagaaaggcggagggcctctgatgcggcggctgcctttatttggggagacgg agcccgtcgggcaagtcggcagggcttggatggcgcccacagaacaaagggctctggtgttcgaaggagcccgattctgt ctggattcatttggaagcagattctaccaaacgggggcctcctcccaaatcaatctttttattgcgagttcagccgtggg ctagaacaaggggatgtggtcgcagaaagaatactcggaacccgaatgagtctacgccgtccactgaactgacattcctt cggcaccagggtttgtattttcccagggtttaagtcctctgtgactgggaagatgcctggcctatgtagagcttgttaga acgttgaatggagacgagggtccaggagacgccgtgtgacttccgttgttcaacctgtctcctcattttgcatattccat tctacattgggtggaaatctatgcaaagatgaagaactgcttatctcaaatgtagtatgatctctgcattcagttctcaa ccagggcactgatagctagtttgattgtttactcctcagattcatggtgcaagtaaataatattaaatctagtgaatttt gaaatgaga |
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Protein
| Protein ID | habu1_s188_g01047.t1 |
|---|---|
| Definition | - |
>habu1_s188_g01047.t1 MAYNVITPFILLKLMERSPKALPRSMVYLCIIIFVMGASIHLVGDSVNHRLIFSGYQLHLSVRENPIIKNLKPETLIDSF ELLYYYDEHLGHSMWYIPFFLILCIYFSGCFIPCKEQQPRIPVAALLLIGPSSLYYWYLVTEGQILTLFVFTTFALVALV MHQRRKGLVMDSNGRFLFYSFVITLGLVALWIGWLWNDQTLRKKYPGIIYVPEPWAFYTLHLRNLPSRKAEGL |
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