Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s188_g01050
Locus habu1_scaffold188 : 274775 ... 347195 : -
To GenomeBrowser habu1_scaffold188:274775..347195
Genes list of scaffold habu1_scaffold188

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s188_g01050.t2 gi|593712361|ref|XP_007102717.1| PREDICTED: dual specificity mitogen-activated protein kinase kinase 5-like isoform X3 [Physeter catodon] 4.0e-20
habu1_s188_g01050.t2 gi|700318838|ref|XP_009928653.1| PREDICTED: dual specificity mitogen-activated protein kinase kinase 5 [Haliaeetus albicilla] 4.0e-20

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.1
Venom grand-1 0.2
Pit, infrared sensing 0.1
Nose 0.1
Brain-1 0.2
Eye 0.2
fetal fibroblast 0.1
venom gland-2 0.1
Brain-2 0.0
Spleen 0.0
Lung 0.1
Liver 0.0
Kidney 0.0
Pancreas 0.5
Small intestine 0.1
Large intestine 0.0
Stomach 0.3
heart 0.1
ovary 0.2
cheek muscle 0.2

Transcript
Transcript IDhabu1_s188_g01050.t1
Definition-
>habu1_s188_g01050.t1
gcaaccagctgtttatctggaatggtatagggcaggggtgtcaaactgccggcccgtgggccggatgcgtcatgctgaaa
ccgcacccaccgcatttccggcaatggggaaaaagtcgcaacacgtcacgtgacgttcctgaacggatttctggagaaca
gtacggcattcattctgatgtttggagtctagggatttccttcatggagcctccgcatggtcccatgatgcccggcagcc
ggcctgtgtccacgtcagttgcagcctcccagggtcccgtgatcgccacgtgccacctgtccagctggcttctgacaggc
aagcttgctctcgggaggttcccctatcctcagatacaccagccgtctcgattagctcaaaagattcagaaaaaccaggg
atctttaatgcctctccagttactccagtgcattgttgatgagggagaccgcggaacccctgggctaattgaccgcctct
ccgccttgccagacgaggcaatgcaaagaaaggcaagctccgatgtggcttctgaaggaggcttgcgtgagtatgaggaa
gcaaccaaaagaacgaccagcccccgaagaattaatgagtgcaggctcaccagtgatgtgcaggttccccccttgcagaa
tgtggggtgttcttgagtcgtttacgatccagcaaaccctagtaagtcaagaagaacagtgaaaaaaatgggacctcaat
taaatataaagacaatgagctatcag
Transcript IDhabu1_s188_g01050.t2
Definition-
>habu1_s188_g01050.t2
gcaaccagctgtttatctggaatggtatagggcaggggtgtcaaactgccggcccgtgggccggatgcgtcatgctgaaa
ccgcacccaccgcatttccggcaatggggaaaaagtcgcaacacgtcacgtgacgttcctgaacggatttctggagaaca
gtacggcattcattctgatgtttggagtctagggatttccttcatggagcctccgcatggtcccatgatgcccggcagcc
ggcctgtgtccacgtcagttgcagcctcccagggtcccgtgatcgccacgtgccacctgtccagctggcttctgacaggc
aagcttgctctcgggaggttcccctatcctcagatacaccagccgtctcgattagctcaaaagattcagaaaaaccaggg
atctttaatgcctctccagttactccagtgcattgttgatgagggagaccgcggaacccctgggctaattgaccgcctct
ccgccttgccagacgaggcaatgcaaagaaaggcaagctccgatgtggcttctgaaggaggcttgctatgaggaagcaac
caaaagaacgaccagcccccgaagaattaatggatccagcaaaccctagtaagtcaagaagaacagtgaaaaaaatggga
cctcaattaaatataaagacaatgagctatcag

Protein
Protein IDhabu1_s188_g01050.t1
Definition-
>habu1_s188_g01050.t1
MLKPHPPHFRQWGKSRNTSRDVPERISGEQYGIHSDVWSLGISFMEPPHGPMMPGSRPVSTSVAASQGPVIATCHLSSWL
LTGKLALGRFPYPQIHQPSRLAQKIQKNQGSLMPLQLLQCIVDEGDRGTPGLIDRLSALPDEAMQRKASSDVASEGGLRE
YEEATKRTTSPRRINECRLTSDVQVPPLQNVGCS
Protein IDhabu1_s188_g01050.t2
Definition-
>habu1_s188_g01050.t2
MLKPHPPHFRQWGKSRNTSRDVPERISGEQYGIHSDVWSLGISFMEPPHGPMMPGSRPVSTSVAASQGPVIATCHLSSWL
LTGKLALGRFPYPQIHQPSRLAQKIQKNQGSLMPLQLLQCIVDEGDRGTPGLIDRLSALPDEAMQRKASSDVASEGGLL

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