Gene
| Gene Model ID | habu1_s188_g01053 |
|---|---|
| Locus | habu1_scaffold188 : 498337 ... 512479 : + |
| To GenomeBrowser | habu1_scaffold188:498337..512479 |
| Genes list of scaffold | habu1_scaffold188 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alpha- and gamma-adaptin-binding protein p34 isoform x1 | GO:0044424 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s188_g01053.t1 | 1 | 1 | Adaptin_binding | 157 | 294 | 1.9e-21 | 76.7 | 3.8e-25 | 2.8e-21 | 76.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s188_g01053.t1 | gi|602647573|ref|XP_007430210.1| | PREDICTED: alpha- and gamma-adaptin-binding protein p34 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s188_g01053.t1 | gi|602647571|ref|XP_007430209.1| | PREDICTED: alpha- and gamma-adaptin-binding protein p34 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s188_g01053.t1 | gi|637352608|ref|XP_008118633.1| | PREDICTED: alpha- and gamma-adaptin-binding protein p34 [Anolis carolinensis] | 0.0 |
| habu1_s188_g01053.t1 | gi|641768399|ref|XP_008168740.1| | PREDICTED: alpha- and gamma-adaptin-binding protein p34 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s188_g01053.t1 | gi|557320493|ref|XP_006033385.1| | PREDICTED: alpha- and gamma-adaptin-binding protein p34 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 14.6 |
| Venom grand-1 | 55.1 |
| Pit, infrared sensing | 21.9 |
| Nose | 18.2 |
| Brain-1 | 13.3 |
| Eye | 19.5 |
| fetal fibroblast | 25.7 |
| venom gland-2 | 69.5 |
| Brain-2 | 14.7 |
| Spleen | 24.1 |
| Lung | 23.6 |
| Liver | 42.0 |
| Kidney | 37.1 |
| Pancreas | 53.7 |
| Small intestine | 31.7 |
| Large intestine | 22.0 |
| Stomach | 25.7 |
| heart | 19.2 |
| ovary | 29.6 |
| cheek muscle | 16.2 |
Transcript
| Transcript ID | habu1_s188_g01053.t1 |
|---|---|
| Definition | - |
>habu1_s188_g01053.t1 gggcctttcacgatcgctggcgtgcgccatggccgtcccgtgcgccttgatcgccagctgcgccgcgggcttccccgggg aggagctggcgaaacttatcaccggaggaggaggaggaggaggagagcttcctgagcatattgccgcagagagcggagcc cagttgtacccctggacgatagacaataagtattactcggctgccatccatctctgcgtggtggcaaatgtgtttcaggt gtcggcggaaattgcagagtccattcaggctttcctggtttacttcgacagcaccacagtatcggggctggatgctgcct ctcagtggcttcctcttatagaagactggctaccagaagtgatgatcttggtctgtgacagagtctctgaaaatggtgtc accaggcagaaggcccaagagtggtgcatccagcacagctttgagttggtggagctcagcccagaggagcttccggatga ggaagacgatttcccagaatctacaggagtgaaacgaatcatccaggccttgaatgccaacgtctggtcaaacgtggtga tgaaaaacgaggcaagccacagctttggccttttcccagccttagcaggggcagatcgcaggatcgggtcagaagagaac aaagctccagaagccaactgtttgccgccggccgagagggcccaagctgtggtggattcagaagctctggctcctgcgga tggagcccagggtgaccccattgctgacccagcgctggacacggacattcaggagcttgctagcctcaccgcaggagaag gagacattgagaactttgagcgactcttctccaagctgaaggaaatgaaagaaaaggctgccactctgcctcgcgaacaa agaaagctgcatgccgaaaaggttaccaaagccttctggatggccatcgggggagaccaggatgagatcgaaggctcgtc ttccgacgagggcaactaaggatgggggtttgcagactggaacgggactctggttttgaacgtgcgacagtggttggctg ccaccacgagacttagttcattcctgtccttcagcattgaaaagtagctgcctccgttgtctccttgtctggattgacca aggggattgtggaccttcaagtgaacagagcctgttctcagttaaaggagaagctgcaccgtgtctttgcggctgctgct ttgggatagaccaagcatggttccatttgccttctaccttgtcttcatatcaaaatacagactgaaatctggaggggaat gtttgtagaaagttatctgttagtttaggaatcttgatgtccctagacccttaaaaggggagaaatgctgaaaaatgcag cttctcttggctcaacttcatttggaatcggatcctgagtgttttatcaaatgctgg |
|
Protein
| Protein ID | habu1_s188_g01053.t1 |
|---|---|
| Definition | - |
>habu1_s188_g01053.t1 MAVPCALIASCAAGFPGEELAKLITGGGGGGGELPEHIAAESGAQLYPWTIDNKYYSAAIHLCVVANVFQVSAEIAESIQ AFLVYFDSTTVSGLDAASQWLPLIEDWLPEVMILVCDRVSENGVTRQKAQEWCIQHSFELVELSPEELPDEEDDFPESTG VKRIIQALNANVWSNVVMKNEASHSFGLFPALAGADRRIGSEENKAPEANCLPPAERAQAVVDSEALAPADGAQGDPIAD PALDTDIQELASLTAGEGDIENFERLFSKLKEMKEKAATLPREQRKLHAEKVTKAFWMAIGGDQDEIEGSSSDEGN |
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