Gene
| Gene Model ID | habu1_s1917_g07033 |
|---|---|
| Locus | habu1_scaffold1917 : 52426 ... 53249 : + |
| To GenomeBrowser | habu1_scaffold1917:52426..53249 |
| Genes list of scaffold | habu1_scaffold1917 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 39s ribosomal protein mitochondrial | GO:0003735 GO:0005762 GO:0006412 GO:0042254 GO:0044822 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1917_g07033.t2 | 1 | 1 | MRP-L27 | 13 | 125 | 4.5e-37 | 126.1 | 3.39997e-41 | 5.1e-37 | 125.9 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 33.2 |
| Venom grand-1 | 91.7 |
| Pit, infrared sensing | 44.6 |
| Nose | 39.1 |
| Brain-1 | 22.4 |
| Eye | 36.7 |
| fetal fibroblast | 79.4 |
| venom gland-2 | 133.0 |
| Brain-2 | 19.9 |
| Spleen | 48.4 |
| Lung | 45.3 |
| Liver | 65.7 |
| Kidney | 51.8 |
| Pancreas | 96.3 |
| Small intestine | 55.8 |
| Large intestine | 39.6 |
| Stomach | 55.3 |
| heart | 61.9 |
| ovary | 54.5 |
| cheek muscle | 49.1 |
Transcript
| Transcript ID | habu1_s1917_g07033.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07033.t1 cgaagtagtttccaccatccaatcacaagcggcgatgttgcggtggcggcgtcaacagcgtccgccgccaccgccgttcg ccgccatggggctgctgggcgaggtgacgcgagggctggtccgcggcgccgaccgcatgtcggcctggacgagcaagcgt ggcccgcggaccttcttcaagagccgcggctgcaaggtcttgggcaacatcaccccgagccggaagttcgtgctggtgaa ggaccgggtgccggtgctgatggtgccggacctgaccggcttcaagctgaagccctacgtctcctaccgggcgcccgcgg gcagcgagccgcccctgagcgcccgcgcgctcttccagcagacggccgcgccgctgatcgagaaggacttccagcgggcc tccttcgaccccgacgccctggagaagtacggcttcgagcccagccaggaagggaagctcttccgccttttccccaagaa cttcgtgcgctagcggaaggaaggaaggaaggaaggaaggaaggagagagagagagacacacacacacaccaattggaga caaatcgtccccccaggattgcaacttccttgcagcctttcaaatgccggatcgaaagaggagagaaaaaaagacaattc cttaaaagaagagggaggaggcacaatttaagacaaaattcccccaaagaagatggaaaagtgcgcaatttctttgaaca aagagggataaaaaaagacaccctctctcccaaaggcgacttttggaacagatcattgggggtggggtaggggtagaata aagagcatgcagatgttgtatctc |
|
| Transcript ID | habu1_s1917_g07033.t2 |
| Definition | - |
>habu1_s1917_g07033.t2 tccgccgccaccgccgttcgccgccatggggctgctgggcgaggtgacgcgagggctggtccgcggcgccgaccgcatgt cggcctggacgagcaagcgtggcccgcggaccttcttcaagagccgcggctgcaaggtcttgggcaacatcaccccgagc cggaagttcgtgctggtgaaggaccgggtgccggtgctgatggtgccggacctgaccggcttcaagctgaagccctacgt ctcctaccgggcgcccgcgggcagcgagccgcccctgagcgcccgcgcgctcttccagcagacggccgcgccgctgatcg agaaggacttccagcgggcctccttcgaccccgacgccctggagaagtacggcttcgagcccagccaggaagggaagctc ttccgccttttccccaagaacttcgtgcgctagcggaaggaaggaaggaaggaaggaaggaaggagagagagagagacac acacacacaccaattggagacaaatcgtccccccaggattgcaacttccttgcagcctttcaaatgccggatcgaaagag gagagaaaaaaagacaattccttaaaagaagagggaggaggcacaatttaagacaaaattcccccaaagaagatggaaaa gtgcgcaatttctttgaacaaagagggataaaaaaagacaccctctctcccaaaggcgacttttggaacagatcattggg ggtggggtaggggtagaataaagagcatgcagatgttgtatctc |
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Protein
| Protein ID | habu1_s1917_g07033.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07033.t1 MLRWRRQQRPPPPPFAAMGLLGEVTRGLVRGADRMSAWTSKRGPRTFFKSRGCKVLGNITPSRKFVLVKDRVPVLMVPDL TGFKLKPYVSYRAPAGSEPPLSARALFQQTAAPLIEKDFQRASFDPDALEKYGFEPSQEGKLFRLFPKNFVR |
|
| Protein ID | habu1_s1917_g07033.t2 |
| Definition | - |
>habu1_s1917_g07033.t2 MGLLGEVTRGLVRGADRMSAWTSKRGPRTFFKSRGCKVLGNITPSRKFVLVKDRVPVLMVPDLTGFKLKPYVSYRAPAGS EPPLSARALFQQTAAPLIEKDFQRASFDPDALEKYGFEPSQEGKLFRLFPKNFVR |
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