Gene
| Gene Model ID | habu1_s1917_g07034 |
|---|---|
| Locus | habu1_scaffold1917 : 53538 ... 60275 : - |
| To GenomeBrowser | habu1_scaffold1917:53538..60275 |
| Genes list of scaffold | habu1_scaffold1917 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1917_g07034.t2 | 1 | 1 | WD40 | 224 | 261 | 9.2e-11 | 41.2 | 1.2e-07 | 0.00093 | 19.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.1 |
| Venom grand-1 | 14.6 |
| Pit, infrared sensing | 11.0 |
| Nose | 8.5 |
| Brain-1 | 5.4 |
| Eye | 7.0 |
| fetal fibroblast | 9.8 |
| venom gland-2 | 9.6 |
| Brain-2 | 5.6 |
| Spleen | 14.5 |
| Lung | 21.8 |
| Liver | 19.5 |
| Kidney | 17.0 |
| Pancreas | 15.4 |
| Small intestine | 20.1 |
| Large intestine | 14.9 |
| Stomach | 18.2 |
| heart | 9.1 |
| ovary | 4.4 |
| cheek muscle | 5.6 |
Transcript
| Transcript ID | habu1_s1917_g07034.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07034.t1 gagaggaagaggcgcgcccggtggcgccgcctcccagcctcgccgcgcctttccttttccagcccgcgccgaggacagga agggcggcccgcgcagaatgaaggcgcattgacatggctttcaaatgcaaggtgcaaactttgcaggtggtggataccga gtatagcgcggacgcggtagaatggtgcccggtggaaggctggcaccgcatcctggcatgtggcacctaccagttgaaaa aaacggagagtgagcctggccaggacagcgaagcccccgtgcgtctaggacgtctctacctctattcctttgaagatcaa attttcacaccgctgacggagatccagaggatggaaacggtggctatattggaccttaaatggtgccatgttcccatcgc agggcatcctgtgttagccatggcaaatgccaagggggcggtgaagcttttccacttgatgggaagcgagaagacttgca ggcttcaacctctgtgcagtgttgacctgggagatgattgccttgctctgtcactggactggtccacgggacgagagccg tgcagccagcccttgcagctggtcagcagcgattccaaagggagggtgagtttgctgtcgatggatgaatccagttcctc gctgcacgtcttggaccagtggaagggacatgactttgaagcctggatcgctgcctttgaccgctggaacacacatgttg tgtactcaggtggagatgattgcaaactacacggctgggatactcggagcagctcaagagtccctctcttcaccagtgag cggcactctatgggggtctgcagcattcagagtcacccgctgcgggaaaatctgctagccacaggaagctacgatgaaca cgtgctcctgtgggacaccaggaagatgaagcagcccctggctgacacccatgttcacggtggcgtctggcgcttaaagt ggcacccctcccaggcccactggctgctggccgcctgtatgcacaacggctttgtaatcctcaattgtcggagcggttta gaagagaaccaagacaaatgcaccatcctttcgtcttatgccttgcacaattccttggcttatggcgccgattggtcccg atttctcccgagcaattctttggagacgtctgcaacggtgccggcagttcaggtggaccaaggagccagcagaggagacc tgaaagtgcagaatctcaagatcatttacgaatcccccacggccacctttgacgtgctgctagaggaggaggaagaggac caccctcccgcctctccatccccagcagagggtcttgcggacctgcaggggccttccggtgacggaaaagctccagatgc caaagcgaatggggacgttgaagcagccaaagcccaaaaggaaaccagcctcttagcaacgtgctccttttatgacaacg ttctacacgtctggaagtgggaggtcagccagagttcctctctggcctaaacccactcttctgtgtgtgtggatggctgc agtatattttgccccttccctcccttctaccagcagggggagcaacacactgaagagatgactttggatagaagagaata tttatagctcagggttgaactggggggtccttggggctctctgaactttgttgttttcttgcagacgtttcattaccaaa ctaggtaacattatcagagatagaagcgagtgcagtctacagcgtggaggactgtagggttctgggtactatgagctggg ttgtcttcttgcagacgtttcgtgactgaactaggtaacatcagtgctagtgagtgtggtgtttgctccgtttatataca ggagcttctcctttcagtcttagtggagttgtggttttctccttggaagttcttgagtagggtattgttttctccttgat tgtctatctggtgcttatttggatattggatgccgggtgcaaggcaagctactgaatataaacaggaagctcatttggtt cctcagttatctagtttgctaatgaaacatctgcaaaaaaacccccatcaagcgcagcgagcaccaaggacccacagttc aatcttgagctaccaatattctcatctatgggtatgatgtttttatatcactgctggtagctgtgagttttgaaggctct gctactgtatgttgcttgctcggttctttccaacagcttttttttttgtgctgcagaaataagattgtttgggttcccta atatcctgttaattccactttccccctaagacttgattgttgcaacattctcaaacaccagcttcaacatgggagtgcca tttagctcgaggtttattccaaatgaatagggaaactgaagtcctattcaagcttgggaaagcgttgaaattaaaaatgg caaccaatgataataacaaaaatgctttcttggaagtccaagcacaagtttcgttgtgctatagactgccctcgtcaaag ggcatgtttgtgatacaaataatgacattttcatacaaacacgctcattggcattgcaaagagcacctttcaactgaaat atatttttgatctttttttacaataaaatgttgtcttgtaagatccagt |
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| Transcript ID | habu1_s1917_g07034.t2 |
| Definition | - |
>habu1_s1917_g07034.t2 gagaggaagaggcgcgcccggtggcgccgcctcccagcctcgccgcgcctttccttttccagcccgcgccgaggacagga agggcggcccgcgcagaatgaaggcgcattgacatggctttcaaatgcaaggtgcaaactttgcaggtggtggataccga gtatagcgcggacgcggtagaatggtgcccggtggaaggctggcaccgcatcctggcatgtggcacctaccagttgaaaa aaacggagagtgagcctggccaggacagcgaagcccccgtgcgtctaggacgtctctacctctattcctttgaagatcaa attttcacaccgctgacggagatccagaggatggaaacggtggctatattggaccttaaatggtgccatgttcccatcgc agggcatcctgtgttagccatggcaaatgccaagggggcggtgaagcttttccacttgatgggaagcgagaagacttgca ggcttcaacctctgtgcagtgttgacctgggagatgattgccttgctctgtcactggactggtccacgggacgagagccg tgcagccagcccttgcagctggtcagcagcgattccaaagggagggtgagtttgctgtcgatggatgaatccagttcctc gctgcacgtcttggaccagtggaagggacatgactttgaagcctggatcgctgcctttgaccgctggaacacacatgttg tgtactcaggtggagatgattgcaaactacacggctgggatactcggagcagctcaagagtccctctcttcaccagtgag cggcactctatgggggtctgcagcattcagagtcacccgctgcgggaaaatctgctagccacaggaagctacgatgaaca cgtgctcctgtgggacaccaggaagatgaagcagcccctggctgacacccatgttcacggtggcgtctggcgcttaaagt ggcacccctcccaggcccactggctgctggccgcctgtatgcacaacggctttgtaatcctcaattgtcggagcggttta gaagagaaccaagacaaatgcaccatcctttcgtcttatgccttgcacaattccttggcttatggcgccgattggtcccg atttctcccgagcaattctttggagacgtctgcaacggtgccggcagttcaggtggaccaaggagccagcagaggagacc tgaaagtgcagaatctcaagatcatttacgaatcccccacggccacctttgacgtgctgctagaggaggaggaagaggac caccctcccgcctctccatccccagcagagggtcttgcggacctgcaggggccttccggtgacggaaaagctccagatgc caaagcgaatggggacgttgaagcagccaaagcccaaaaggaaaccagcctcttagcaacgtgctccttttatgacaacg ttctacacgtctggaagtgggaggtcagccagagttcctctctggcctaaacccactcttctgtgtgtgtggatggctgc agtatattttgccccttccctcccttctaccagcagggggagcaacacactgaagagatgactttggatagaagagaata tttatagctcagggttgaactggggggtccttggggctctctgaactttgttgttttcttgcagacgtttcattaccaaa ctaggtaacattatcagagatagaagcgagtgcagtctacagcgtggaggactgtagggttctgggtactatgagctggg ttgtcttcttgcagacgtttcgtgactgaactaggtaacatcagtgct |
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Protein
| Protein ID | habu1_s1917_g07034.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07034.t1 MAFKCKVQTLQVVDTEYSADAVEWCPVEGWHRILACGTYQLKKTESEPGQDSEAPVRLGRLYLYSFEDQIFTPLTEIQRM ETVAILDLKWCHVPIAGHPVLAMANAKGAVKLFHLMGSEKTCRLQPLCSVDLGDDCLALSLDWSTGREPCSQPLQLVSSD SKGRVSLLSMDESSSSLHVLDQWKGHDFEAWIAAFDRWNTHVVYSGGDDCKLHGWDTRSSSRVPLFTSERHSMGVCSIQS HPLRENLLATGSYDEHVLLWDTRKMKQPLADTHVHGGVWRLKWHPSQAHWLLAACMHNGFVILNCRSGLEENQDKCTILS SYALHNSLAYGADWSRFLPSNSLETSATVPAVQVDQGASRGDLKVQNLKIIYESPTATFDVLLEEEEEDHPPASPSPAEG LADLQGPSGDGKAPDAKANGDVEAAKAQKETSLLATCSFYDNVLHVWKWEVSQSSSLA |
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| Protein ID | habu1_s1917_g07034.t2 |
| Definition | - |
>habu1_s1917_g07034.t2 MAFKCKVQTLQVVDTEYSADAVEWCPVEGWHRILACGTYQLKKTESEPGQDSEAPVRLGRLYLYSFEDQIFTPLTEIQRM ETVAILDLKWCHVPIAGHPVLAMANAKGAVKLFHLMGSEKTCRLQPLCSVDLGDDCLALSLDWSTGREPCSQPLQLVSSD SKGRVSLLSMDESSSSLHVLDQWKGHDFEAWIAAFDRWNTHVVYSGGDDCKLHGWDTRSSSRVPLFTSERHSMGVCSIQS HPLRENLLATGSYDEHVLLWDTRKMKQPLADTHVHGGVWRLKWHPSQAHWLLAACMHNGFVILNCRSGLEENQDKCTILS SYALHNSLAYGADWSRFLPSNSLETSATVPAVQVDQGASRGDLKVQNLKIIYESPTATFDVLLEEEEEDHPPASPSPAEG LADLQGPSGDGKAPDAKANGDVEAAKAQKETSLLATCSFYDNVLHVWKWEVSQSSSLA |
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