Gene
| Gene Model ID | habu1_s1917_g07035 |
|---|---|
| Locus | habu1_scaffold1917 : 62779 ... 68725 : - |
| To GenomeBrowser | habu1_scaffold1917:62779..68725 |
| Genes list of scaffold | habu1_scaffold1917 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger mynd domain-containing protein 19 | GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1917_g07035.t1 | 1 | 1 | HNH_3 | 57 | 95 | 7.1e-08 | 31.7 | 1.8e-11 | 1.3e-07 | 30.8 |
| habu1_s1917_g07035.t1 | 1 | 1 | zf-MYND | 173 | 203 | 6.5e-08 | 32.3 | 1.5e-11 | 1.1e-07 | 31.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1917_g07035.t1 | gi|637370440|ref|XP_003229632.2| | PREDICTED: zinc finger MYND domain-containing protein 19 [Anolis carolinensis] | 0.0 |
| habu1_s1917_g07035.t1 | gi|602627469|ref|XP_007420682.1| | PREDICTED: zinc finger MYND domain-containing protein 19 [Python bivittatus] | 0.0 |
| habu1_s1917_g07035.t1 | gi|530598371|ref|XP_005292703.1| | PREDICTED: zinc finger MYND domain-containing protein 19 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s1917_g07035.t1 | gi|543367748|ref|XP_005527224.1| | PREDICTED: zinc finger MYND domain-containing protein 19 [Pseudopodoces humilis] | 0.0 |
| habu1_s1917_g07035.t1 | gi|197127732|gb|ACH44230.1| | putative MIZIP protein [Taeniopygia guttata] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.7 |
| Venom grand-1 | 7.5 |
| Pit, infrared sensing | 5.6 |
| Nose | 5.5 |
| Brain-1 | 5.8 |
| Eye | 6.8 |
| fetal fibroblast | 9.1 |
| venom gland-2 | 6.7 |
| Brain-2 | 4.9 |
| Spleen | 3.9 |
| Lung | 4.2 |
| Liver | 12.5 |
| Kidney | 7.7 |
| Pancreas | 5.4 |
| Small intestine | 6.8 |
| Large intestine | 4.4 |
| Stomach | 8.7 |
| heart | 3.4 |
| ovary | 88.4 |
| cheek muscle | 8.7 |
Transcript
| Transcript ID | habu1_s1917_g07035.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07035.t1 ggcggcgtctccgtccagcgcggcctcccctcctcctcctcctcctcctcctcctctccttctcctctttcttctcccct cttccccccttcctcctctcctccgcccaggccggggccatgaccgacttcaagctgggcatcacaaaatacacgctgat agatgagcaagacattcctctcgtagagagctactcttttgaggctcgaatggaagttgacgccgacgggaatggtgcta gaatctttgcttttgcgttcgacaagaaccgagggaggggattcgggcgtctgctgcacgagctgctgtgggaaagacac cggggaggcatcgccccagggttccaggtggtgcatttgaatgcagtgaccgttgacaatcgcttggacaacctgcgatt ggtgccgtggggctggaggcccaaagctgaagaaatctctagcaaacaaagggaacaaagcttgtactggctggcgatac aacagcttccaactgatcccattgaggagcagttccccgtattgaatgtcacacgctactacaacgctaacggagacgtg gtggaagaagaggagagttcctgcacgtactatgaatgtcactaccctccctgcacaatgattgagaaacagttacgcga atttaacatctgtggccgatgccaggttgcgcggtactgcggttcccagtgccagcagaaagactggcccgctcacaaga agcactgtcgggagaagaaacggcccgtccagcaagaactgggaccagagcgatgacaaggctggccaaaaacttcgccg caagggcctttcccctcccggagggcgagggcattgggggggggctccgactttgcacagactgctgacttgaagccaga ggcactgacaacaaggagaaaaagaaagagaagacaaac |
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Protein
| Protein ID | habu1_s1917_g07035.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07035.t1 MTDFKLGITKYTLIDEQDIPLVESYSFEARMEVDADGNGARIFAFAFDKNRGRGFGRLLHELLWERHRGGIAPGFQVVHL NAVTVDNRLDNLRLVPWGWRPKAEEISSKQREQSLYWLAIQQLPTDPIEEQFPVLNVTRYYNANGDVVEEEESSCTYYEC HYPPCTMIEKQLREFNICGRCQVARYCGSQCQQKDWPAHKKHCREKKRPVQQELGPER |
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