Gene
| Gene Model ID | habu1_s1917_g07037 |
|---|---|
| Locus | habu1_scaffold1917 : 73339 ... 77115 : - |
| To GenomeBrowser | habu1_scaffold1917:73339..77115 |
| Genes list of scaffold | habu1_scaffold1917 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 60s ribosomal protein l12-like | GO:0003735 GO:0005925 GO:0006412 GO:0016020 GO:0022625 GO:0042254 GO:0044822 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1917_g07037.t1 | 1 | 1 | Ribosomal_L11_N | 13 | 69 | 2.6e-17 | 62.0 | 5.0e-21 | 3.7e-17 | 61.5 |
| habu1_s1917_g07037.t1 | 1 | 1 | Ribosomal_L11 | 74 | 143 | 1.6e-11 | 44.2 | 3.1e-15 | 2.3e-11 | 43.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1917_g07037.t1 | gi|602627408|ref|XP_007420652.1| | PREDICTED: 60S ribosomal protein L12-like [Python bivittatus] | 0.0 |
| habu1_s1917_g07037.t1 | gi|557279387|ref|XP_006022733.1| | PREDICTED: 60S ribosomal protein L12-like [Alligator sinensis] | 0.0 |
| habu1_s1917_g07037.t1 | gi|530598369|ref|XP_005292702.1| | PREDICTED: 60S ribosomal protein L12 [Chrysemys picta bellii] | 0.0 |
| habu1_s1917_g07037.t1 | gi|525015699|ref|XP_005055426.1| | PREDICTED: 60S ribosomal protein L12 isoform X2 [Ficedula albicollis] | 0.0 |
| habu1_s1917_g07037.t1 | gi|345316438|ref|XP_001515188.2| | PREDICTED: 60S ribosomal protein L12 [Ornithorhynchus anatinus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 271.1 |
| Venom grand-1 | 1473.1 |
| Pit, infrared sensing | 543.1 |
| Nose | 320.1 |
| Brain-1 | 64.4 |
| Eye | 279.8 |
| fetal fibroblast | 511.5 |
| venom gland-2 | 973.7 |
| Brain-2 | 57.4 |
| Spleen | 578.3 |
| Lung | 395.8 |
| Liver | 1083.9 |
| Kidney | 640.0 |
| Pancreas | 1130.6 |
| Small intestine | 1059.3 |
| Large intestine | 560.0 |
| Stomach | 844.2 |
| heart | 237.9 |
| ovary | 59.4 |
| cheek muscle | 271.4 |
Transcript
| Transcript ID | habu1_s1917_g07037.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07037.t1 gcgatctcgcgagatcttggcagctatatgccgcggcatcgcccttccgaggcctttcgagttttcgacgcggatctggg ttctcgttttgtgaatccgccgccatctgaatcggacgttggccggacgtgactgtagccatcatgccgcccaagttcga ccccaacgagatcaaagtcgtgttcctgagatgcaccggaggtgaagtcggggccacttctgccctggctcccaaaatcg gacctttgggtttgtctccaaagaaggtgggagatgacattgccaaggccaccggcgactggaaggggctgaggatcacc gtgaagctgaccattcagaacaggcaagcacagattgaggtggtcccatcagcctcagccctgattatcaaagctctgaa ggagccacctcgtgatcgcaagaagcagaagaacattaaacacagcggcagtgtcagcttcgatgagatcgtcagcattg cccggcagatgagacatcggtccttggctcgggagctctcaggcactattaaggagatcctgggaactgctcagtcggtt gggtgcagtattgatgggagacaccctcacgatattattgacgacatcaatagcggggcagttgaatgcccagcgaacta ggtctgccacctgaacagactgcctgcaacttggtttttctatccttctgtaaaaaaaatgtagtttgtttggctgctgc catgaaagatgggatcttcatcacctctctaacttcttggactctttaaggtgtgattcccttagggtgctgaaagagtt gttgtacgcttttcaaaaaataaaaagtgcaccaggttaactccag |
|
Protein
| Protein ID | habu1_s1917_g07037.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07037.t1 MPPKFDPNEIKVVFLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASAL IIKALKEPPRDRKKQKNIKHSGSVSFDEIVSIARQMRHRSLARELSGTIKEILGTAQSVGCSIDGRHPHDIIDDINSGAV ECPAN |
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