Gene
| Gene Model ID | habu1_s1917_g07038 |
|---|---|
| Locus | habu1_scaffold1917 : 77686 ... 101833 : + |
| To GenomeBrowser | habu1_scaffold1917:77686..101833 |
| Genes list of scaffold | habu1_scaffold1917 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1917_g07038.t1 | 3 | 1 | LRR_4 | 144 | 180 | 3.1e-18 | 64.9 | 2.0e-10 | 2.3e-07 | 30.2 |
| habu1_s1917_g07038.t1 | 2 | 1 | LRR_8 | 144 | 199 | 1.5e-14 | 53.4 | 4.6e-10 | 5.2e-07 | 29.3 |
| habu1_s1917_g07038.t1 | 3 | 2 | LRR_4 | 188 | 226 | 3.1e-18 | 64.9 | 3.4e-11 | 3.9e-08 | 32.7 |
| habu1_s1917_g07038.t1 | 2 | 2 | LRR_8 | 188 | 241 | 1.5e-14 | 53.4 | 1.3e-11 | 1.5e-08 | 34.2 |
| habu1_s1917_g07038.t1 | 3 | 3 | LRR_4 | 211 | 240 | 3.1e-18 | 64.9 | 7.7e-08 | 8.8e-05 | 22.0 |
| habu1_s1917_g07038.t1 | 1 | 1 | SAM_1 | 607 | 657 | 2.5e-06 | 27.5 | 6.7e-09 | 7.6e-06 | 26.0 |
| habu1_s1917_g07038.t1 | 1 | 1 | SAM_2 | 610 | 662 | 2.0e-07 | 30.7 | 1.8e-09 | 2.0e-06 | 27.5 |
| habu1_s1917_g07038.t1 | 1 | 1 | zf-C3HC4_3 | 707 | 747 | 1.9e-12 | 46.6 | 5.6e-13 | 6.4e-10 | 38.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1917_g07038.t1 | gi|602627406|ref|XP_007420651.1| | PREDICTED: E3 ubiquitin-protein ligase LRSAM1 isoform X6 [Python bivittatus] | 0.0 |
| habu1_s1917_g07038.t1 | gi|602627396|ref|XP_007420646.1| | PREDICTED: E3 ubiquitin-protein ligase LRSAM1 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1917_g07038.t1 | gi|564258839|ref|XP_006268349.1| | PREDICTED: E3 ubiquitin-protein ligase LRSAM1 [Alligator mississippiensis] | 0.0 |
| habu1_s1917_g07038.t1 | gi|530598365|ref|XP_005292700.1| | PREDICTED: E3 ubiquitin-protein ligase LRSAM1 [Chrysemys picta bellii] | 0.0 |
| habu1_s1917_g07038.t1 | gi|591386616|ref|XP_007067728.1| | PREDICTED: E3 ubiquitin-protein ligase LRSAM1 isoform X1 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.6 |
| Venom grand-1 | 3.7 |
| Pit, infrared sensing | 3.4 |
| Nose | 4.0 |
| Brain-1 | 6.4 |
| Eye | 3.2 |
| fetal fibroblast | 4.0 |
| venom gland-2 | 3.7 |
| Brain-2 | 8.4 |
| Spleen | 4.4 |
| Lung | 6.1 |
| Liver | 9.2 |
| Kidney | 7.9 |
| Pancreas | 3.2 |
| Small intestine | 3.2 |
| Large intestine | 4.3 |
| Stomach | 3.8 |
| heart | 9.4 |
| ovary | 4.8 |
| cheek muscle | 19.4 |
Transcript
| Transcript ID | habu1_s1917_g07038.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07038.t1 gctggcatgacagcttcacctgttgagtgtctgcctgcatccctgctctgagagtgacttgtttgcaaggcgtttccttg gaaatacatccagccggatgccatggcacctcctggcagattccgattgccatcctgctgaactgggataaatggagaca ggagtcaagatgccgctcttctttcgaaaaaggaaggcgagcaacgaagcccggaaacgcctggaatatcaaatgtgtct cgcaaaggaagcgggagcagatgatattcttgacatctccaggtgtgaactttctgagcttccctacggtgccttttcga cctgcaaagtattgcagaagaaggtgctgattgctcacaccaattttttgatgtccctcatccccaaatcctgcagcctc tctaatcttgtaacgataaagggggacagtccgaagctgcagtggtattcttgcattcccagtttctggatgacaatccc atcaccctttgtggttcaccatggaggctgggcagaagattattggaacaacctcttgagagagagtggattgttatggg tttctttttatctccttttccaggttttagatctccatgataaccagctgacctcccttcctgccgatatcggccagttg atttctcttcaggttttgaatgtagaaaagaatgttttaaaagctcttccggactcaattggggatcttgttcagcttca gacgctgaatttgaaaggaaacaagctcaagcaactgccctccaccctggagggcctgcggagtttgcgaacgttggaca tcagtgaaaattcagtccgggagttgccgcagacactggctcacatccgaaccttggagacgctgtccctggatgcttca ggaatggtttacccaccgggtgaggtctgcagcaccggcaccgaggccatccagcagttcctctgtgaccaactgggcac aaaatacaaccctccctctcagtatttactccctgtgttggaaagcgaaggcgaggagacatcagtggatggtgtccgga gaacagctgacaaatacatggaagatgaagccgagtggcaaaacaagtttctagactatgagaagcgaaaggagcagaag atgcaggagaagctggaatttgagcgatggctggatctggagcagagagaacaagtccacttgatgcatcaaagtcacgt ccagaaaggagaatttctccaaagcatgaaagaggagcagatgaaactggaggaaggcctgacccgccatcagcagcgcc tggggaccgagcgcctgaagttgctggatcagctgaagcagatggagcaaggggtggccagcaggatccagaaactgctg gaagataaccaaaggcagaaacaaagttctgagatcttgaaatccctcgagaacgaccggatccggatggagcagctgat ggccatcactcaggaagaaacggaacagctgaggaagaaagaagtagccgcggccatgaagcagatgttgtctgagacct acaagaacagacttcttcagggggcctatgagtctcgccggcaggacctggtcaaccagacgtgttccagccttgccaag atggatgagaagttccagcagatcctggcttggcagcagctggatcagaacaaagccatcagccagatcctgcaggagag caagatgcagaaggcagccttcgaagccctccaggtgaagcgagacgtcatgcactgccagatcagaaaccaggaagcaa ttggagagcaacggcgcaccttgagttatctgctgcagcagctgctgaaggagaaaaaagagcgagaagaggaactgcaa gccattctgaaagaattggaggccaagagtgagacgaagcaggagaactactggctgatccaataccaacgactcttaaa tcagaagcccctctctctccgattgcaggaagaaggtctggagaggcagttggtgaagctgttgacgggcctctcggccg aacagtacctacccatttttgcccaccatcggatctctctcgaaatgctcagccacatggtccctagggacctagccaag atcggaataactgaatctggcttgcaacgtgccatcgtccagaaagctcgggagatacaagctgttgcagaaaccatacc agaactgttgaagccagcagaagaagtggggccttttgctcccgagtttggagaagagcccgcccagcctgaagtcccat caggtccaccaccagaagaacaccactgcgagtgtgtagtctgtatggagttagaggcccaagtggtgttcctgtactgc ggtcacgtctgctgctgccaaaactgctccgaagccttgcacacctgcccgctctgcagacaagcgattgtgcaacggat ccggcttttccacagcggctatagtcctctggaggatgccaaaggggcagaagacatggccctcctgtcctctgcggatg gctgtggaaaggaatgcaacatctgctacgagtcctgccaagaggttgccaccaggcgggtgccgaagcttctctggtgt tcccacaccgtctgcctggcctgtctcaggaaactggtttgccggagcagagcggtctccttcgtggtctgccctttctg ccggatggtgaccctcgtgccccaaggtggcctccaggacttgaagaacaatgaagctctcctacgggagataggactac cgggaacacagatgtcccaagccacctctgaagatggtttggaagaagacaaagagtccaccagggtttccaactggtcc tttggcaacttggccctgtctctggagtacacctatagtcctccttcgcccatcttcaccatcagcagcatcgttccggt gttttccacaggcttccatgccgggatgtggagcggacaccgtctgcaggagatgcaaaacgccgtggtgatagagatgc ctccaagggcagcctcagcccctgcctctgtggagaacctgcgcatttgctttgcggtgactctgatccttcttgtcgtc tccatcttcttcacgctagtcttttcttgagcagagaatactagaggcgccaccgaacctcaagaaggccttgaggaacg atgaagttctacgagaaacaggaccaccaggagcagaggcatctcagtctgatctcagccagaaggttctatgggccaaa cgtagctgctgccacaaatcaaggacccatagcttgctcctagatttaacttctcctcctacttgaccatcaggactttc tgatccagcagtgatgaggtcgcccctattgtcctctttctggccgctgttgagaatttgcacaattttctccatggcag gcagaagggacagctgcttcaaatgatggtggtctacaattctcaggagtccctgccaagcatgaccagggatgaaggat gctggagcatgtgggttagcatcagctagaaggctcttgtttcaataggctatacgatggatggatggatggatggatgg atggatggatggatggatggatgatttccaataatgccacgactactttcatcttcagccatcacagccactgaggacca ctaatgccacatttcttgggctagggctgaaggattctgtatgttatagaaaactgttgaaagttgcaattaaaagttct tttttttaagtaggtc |
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Protein
| Protein ID | habu1_s1917_g07038.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07038.t1 METGVKMPLFFRKRKASNEARKRLEYQMCLAKEAGADDILDISRCELSELPYGAFSTCKVLQKKVLIAHTNFLMSLIPKS CSLSNLVTIKGDSPKLQWYSCIPSFWMTIPSPFVVHHGGWAEDYWNNLLRESGLLWVSFYLLFQVLDLHDNQLTSLPADI GQLISLQVLNVEKNVLKALPDSIGDLVQLQTLNLKGNKLKQLPSTLEGLRSLRTLDISENSVRELPQTLAHIRTLETLSL DASGMVYPPGEVCSTGTEAIQQFLCDQLGTKYNPPSQYLLPVLESEGEETSVDGVRRTADKYMEDEAEWQNKFLDYEKRK EQKMQEKLEFERWLDLEQREQVHLMHQSHVQKGEFLQSMKEEQMKLEEGLTRHQQRLGTERLKLLDQLKQMEQGVASRIQ KLLEDNQRQKQSSEILKSLENDRIRMEQLMAITQEETEQLRKKEVAAAMKQMLSETYKNRLLQGAYESRRQDLVNQTCSS LAKMDEKFQQILAWQQLDQNKAISQILQESKMQKAAFEALQVKRDVMHCQIRNQEAIGEQRRTLSYLLQQLLKEKKEREE ELQAILKELEAKSETKQENYWLIQYQRLLNQKPLSLRLQEEGLERQLVKLLTGLSAEQYLPIFAHHRISLEMLSHMVPRD LAKIGITESGLQRAIVQKAREIQAVAETIPELLKPAEEVGPFAPEFGEEPAQPEVPSGPPPEEHHCECVVCMELEAQVVF LYCGHVCCCQNCSEALHTCPLCRQAIVQRIRLFHSGYSPLEDAKGAEDMALLSSADGCGKECNICYESCQEVATRRVPKL LWCSHTVCLACLRKLVCRSRAVSFVVCPFCRMVTLVPQGGLQDLKNNEALLREIGLPGTQMSQATSEDGLEEDKESTRVS NWSFGNLALSLEYTYSPPSPIFTISSIVPVFSTGFHAGMWSGHRLQEMQNAVVIEMPPRAASAPASVENLRICFAVTLIL LVVSIFFTLVFS |
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