Gene
| Gene Model ID | habu1_s1917_g07040 |
|---|---|
| Locus | habu1_scaffold1917 : 138559 ... 140605 : - |
| To GenomeBrowser | habu1_scaffold1917:138559..140605 |
| Genes list of scaffold | habu1_scaffold1917 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| anaphase-promoting complex subunit cdc26 | GO:0005680 GO:0030071 GO:0070979 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1917_g07040.t1 | 1 | 1 | APC_CDC26 | 1 | 58 | 3.8e-14 | 53.1 | 3.7e-18 | 5.5e-14 | 52.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1917_g07040.t1 | gi|602627388|ref|XP_007420642.1| | PREDICTED: anaphase-promoting complex subunit CDC26 [Python bivittatus] | 0.0 |
| habu1_s1917_g07040.t1 | gi|327290116|ref|XP_003229770.1| | PREDICTED: anaphase-promoting complex subunit CDC26 [Anolis carolinensis] | 1.4013e-45 |
| habu1_s1917_g07040.t1 | gi|345323545|ref|XP_001507014.2| | PREDICTED: anaphase-promoting complex subunit CDC26 [Ornithorhynchus anatinus] | 4.06377e-44 |
| habu1_s1917_g07040.t1 | gi|395506069|ref|XP_003757358.1| | PREDICTED: anaphase-promoting complex subunit CDC26 [Sarcophilus harrisii] | 1.99965e-42 |
| habu1_s1917_g07040.t1 | gi|395824032|ref|XP_003785276.1| | PREDICTED: anaphase-promoting complex subunit CDC26 [Otolemur garnettii] | 4.00001e-41 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 26.6 |
| Venom grand-1 | 38.8 |
| Pit, infrared sensing | 32.2 |
| Nose | 30.1 |
| Brain-1 | 18.4 |
| Eye | 62.1 |
| fetal fibroblast | 51.4 |
| venom gland-2 | 66.7 |
| Brain-2 | 20.3 |
| Spleen | 25.3 |
| Lung | 31.4 |
| Liver | 39.3 |
| Kidney | 30.3 |
| Pancreas | 27.6 |
| Small intestine | 34.3 |
| Large intestine | 28.6 |
| Stomach | 31.7 |
| heart | 54.9 |
| ovary | 98.0 |
| cheek muscle | 81.1 |
Transcript
| Transcript ID | habu1_s1917_g07040.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07040.t1 gtcgcgcatgcgcactcgggaagaatacggaggatgctgcggaggaagccgactcggctggagctgaagctggacgacat cgaggagttcgagggggtccgcaaggagctggagatgcagaaaaagcaacgggaagaggtcgacatggtgggaacgaatg acggcgaaggcgccctggccttgaaccccgatcacaagaactgggagcaggtgattcacgatcggatcggctacaaacct cagcccaaacccagcaaccgttcatcacagtttggaaactttgaattctagaatgccgggatggatcttaacttcaagtg aagcatgcttaggagagattaggagaagctgatttacaatgagggcagatggaacccataaggattttatccttctggaa gataaagacttttctgttctctaaagaatgaggttgggtgctttttttcccccacttgaagactgccttcagacaacttg ctgccctggatatctttaccaacctcccattttgcaaccagaggccttaaatcttccaacagcaacactgacagaactgc tgtagcataacctctgtgtgcaaatatttccagacgtcactattggggaaatgttgcatggtgtagccatcctcaatacg aggaaagggtttatttctcgtattgaggaggtgggggcagacccacctccctccaatcattttaacaaggatgaactcac aggctcgccttttcctaggagtggttttgctgttgaggttaccttattttcctcctcacgcattttaccccttgtaacat tgaacatattaaatttcgacttatggttgagataa |
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Protein
| Protein ID | habu1_s1917_g07040.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07040.t1 MLRRKPTRLELKLDDIEEFEGVRKELEMQKKQREEVDMVGTNDGEGALALNPDHKNWEQVIHDRIGYKPQPKPSNRSSQF GNFEF |
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