Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1917_g07043
Locus habu1_scaffold1917 : 153619 ... 156655 : -
To GenomeBrowser habu1_scaffold1917:153619..156655
Genes list of scaffold habu1_scaffold1917

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1917_g07043.t1 gi|558165340|ref|XP_006123806.1| PREDICTED: uncharacterized protein LOC102444294 isoform X1 [Pelodiscus sinensis] 4.0e-22
habu1_s1917_g07043.t1 gi|558165344|ref|XP_006123807.1| PREDICTED: uncharacterized protein LOC102444294 isoform X2 [Pelodiscus sinensis] 5.0e-22

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.1
Venom grand-1 0.3
Pit, infrared sensing 0.4
Nose 0.2
Brain-1 0.1
Eye 0.1
fetal fibroblast 0.1
venom gland-2 0.7
Brain-2 0.1
Spleen 0.0
Lung 0.3
Liver 0.1
Kidney 0.8
Pancreas 0.0
Small intestine 0.1
Large intestine 6.3
Stomach 0.5
heart 0.0
ovary 17.4
cheek muscle 0.5

Transcript
Transcript IDhabu1_s1917_g07043.t1
Definition-
>habu1_s1917_g07043.t1
nnnnnnnnnnnnnnnnngtaatttatattttaaatggagagagagagagagagagagagagagagagagagagagagaga
gatggacctgagtgaagacttcataatacacagtagcccatcttgaaatggagaggctaatttatattgatatctaatcc
atgcatgaggaactgagagaaaattaaatgatggagagatgcaggagagacgaagggatgatgaaagttatatggacaac
aggaacgttccagaactttgctgtggagctaggaagcacactgaggaccagagagatgagaagtctgggcgttcggaagc
tccagcctggcagccccaggaatctgattgtctcccttccatcttcctggcagctttcctggccctcgtctttgtctccg
tgtcagtggtcctgctttgtcatgagaatgtccaccttcctttgaaggacctcaaggccatgagtccccacagtgttcat
ctgcccaaggaagttgtccaatctcttcatctttttttcccaaaccagctggaatccacctggtggacattcctgcgata
tgttggcaacccgttggggaagtctcatttggaggagccttggatcctggttggaattggccctggaggtgcaagccgga
cccttctctgcttcacgaaaatgatgctgtccttactgactcagcaaaaacccataggtgtcgagtttctggactcaacc
agcccttggcttcctccgatgggtccttctgaaaacaggacctgggtgatcgctagcgtgaaggttcttcggggagagaa
gagtctcctgagtggattggtggtgtccttgcaaagtctcccgaatggaaaaggggaagccaccaagaagacatttgccc
tcgtggggaggggtgtggagcagatctgggagaagttcctgctgcaaagatcggtcccttcactgatctctggaattttg
agcttgaatcccgataggagaccagatgagatgatggttgaccaggagaactttcttgtcctcttcatcacctttgagca
atatttggaaagtgggttggtttgctaaaggaggcttaagttctatgtgccgtcctttccttccacagagaggtgtcttc
taatcaattggggacaggtggaatgaaaggcctaccctaatggggaaccaaaaaggtagaaggtcagggaaacttatctg
ggaagtgggaaagttgctatgatttatgaagggacaggggtgaagaacagtgttcaggctagggaagtaaagatctgcaa
gtaggaacccagattttctgtgggcccgagtatttattagcacccatgaaataaagatggaagagtggactttacaggtt
tctttgttgtgaggatctgcccaagagaatgaccctagagcagtgtttcttccactttggcccccttacaatgtatggac
ttcaactcccagaattccccggcccaaaagaacaaaaagaattgattgtccagcctttcccaacaatccagaccaagaat
aaaagtcctgcaatcttacttgtaa

Protein
Protein IDhabu1_s1917_g07043.t1
Definition-
>habu1_s1917_g07043.t1
MQERRRDDESYMDNRNVPELCCGARKHTEDQRDEKSGRSEAPAWQPQESDCLPSIFLAAFLALVFVSVSVVLLCHENVHL
PLKDLKAMSPHSVHLPKEVVQSLHLFFPNQLESTWWTFLRYVGNPLGKSHLEEPWILVGIGPGGASRTLLCFTKMMLSLL
TQQKPIGVEFLDSTSPWLPPMGPSENRTWVIASVKVLRGEKSLLSGLVVSLQSLPNGKGEATKKTFALVGRGVEQIWEKF
LLQRSVPSLISGILSLNPDRRPDEMMVDQENFLVLFITFEQYLESGLVC

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