Gene
| Gene Model ID | habu1_s1917_g07045 |
|---|---|
| Locus | habu1_scaffold1917 : 171206 ... 197845 : - |
| To GenomeBrowser | habu1_scaffold1917:171206..197845 |
| Genes list of scaffold | habu1_scaffold1917 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1917_g07045.t1 | 1 | 1 | Reprolysin | 285 | 380 | 1.7e-11 | 44.1 | 2.2e-14 | 4.0e-11 | 42.8 |
| habu1_s1917_g07045.t1 | 1 | 1 | TSP_1 | 916 | 941 | 4.7e-08 | 33.0 | 4.3e-08 | 7.9e-05 | 22.6 |
| habu1_s1917_g07045.t1 | 1 | 1 | Cg6151-P | 1243 | 1307 | 6.4e-15 | 55.1 | 1.5e-17 | 2.7e-14 | 53.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1917_g07045.t1 | gi|602627465|ref|XP_007420680.1| | PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 13 [Python bivittatus] | 0.0 |
| habu1_s1917_g07045.t1 | gi|700410224|ref|XP_009959126.1| | PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 13 [Leptosomus discolor] | 0.0 |
| habu1_s1917_g07045.t1 | gi|514718674|ref|XP_005013321.1| | PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1 [Anas platyrhynchos] | 0.0 |
| habu1_s1917_g07045.t1 | gi|514718678|ref|XP_005013322.1| | PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X2 [Anas platyrhynchos] | 0.0 |
| habu1_s1917_g07045.t1 | gi|529423066|ref|XP_005231380.1| | PREDICTED: LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 13 [Falco peregrinus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.6 |
| Venom grand-1 | 0.4 |
| Pit, infrared sensing | 0.3 |
| Nose | 0.3 |
| Brain-1 | 0.2 |
| Eye | 0.9 |
| fetal fibroblast | 0.7 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.3 |
| Spleen | 0.1 |
| Lung | 0.1 |
| Liver | 13.4 |
| Kidney | 0.6 |
| Pancreas | 0.2 |
| Small intestine | 0.9 |
| Large intestine | 2.0 |
| Stomach | 0.9 |
| heart | 0.3 |
| ovary | 0.2 |
| cheek muscle | 3.5 |
Transcript
| Transcript ID | habu1_s1917_g07045.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07045.t1 gaaagaaatcagcattcgttccttggttactcagtaaggtggcttcagctcctgaatcatggctaagagtcttttgaagt tgtttttcacattcttgtctctgaaggtttgctggccctccgaaacacacaagacgtttctgaatagtttggaagccagg gacatttacttttatttcgggaccaattcaagccttgaagtgccagaatttgaggttgtgcctctggcttgctcctgtga agacagacagacatcttgcggagttcagctttgttccttccgagcttcaggagacctcttggccattgagttccctcaag atcgcgctctttcccccccgtttttcgtgagcacccgaagattaaactcttctgctagtttgcttcggcgtttaaggcat cactgctttgctggagggaagcctctcaagccactgggggcaacatgccgggtgacttactgtgaagggcaaatgcaagg ttttatccgtgtgcgtggcaagaaggtttacatcagagcagtgaagaagcaacaccaacactacttggtggacccccatc tccccaggccccacatcgtcttcagcagtctgcagaacgattccgcatcagcacagacaagtggaaaggtttcgtcccgg attcgcagagtggtcgaagagaaggtgaaacatctggagctcttggtggtggtagggccagatgttcaccagttccacaa agaagacactgagaggtacatcctcaccaacctcaacattgaaggcatccagatcacgaccaacatcaccagctcggtcc tgagcgtctgcaaatggagcctaaaggtcaacccagagaatgacttggaccctcgtcatgcagatctcgttctttacgtc accaaatttgatctagagctcccggatggaaataagcaagtacgtggcgtcacttcaaagggaggagcctgttcaaggtc ttggagctgcatcatcaccgaggacaccggcttcggcttgggcatcaccgttgctcacgagatcgcccacagctttggga ttgaccacgatggggaagggaaccgctgcgtgggagaccgacacattatgggctccgaaggggggcacaacagcctggat ctgacctggtcggtctgcagccgagagcagctccaggcattcgtcagtacaggccaagcaagctgcacagatgacttgcc tgtgttaaagagcagtctgccggaagcaaagcctggcctatattttggggcggaggagcagtgcaaaattgccttcggtt caggggcttcggcctgcactttcagctatgatgtggacatgtgccgagttctctcctgccacaccaattcggccgatcaa tccacctgctctcggctccatgtcccgcttctggatggaaccgaatgtgggatcaacaagatgtttggatgtgacggccg gatggattccggaaagaagatggatccgtgtcaattactccagctcttcattgtcctggttgaggtcttcacaacgatct tctaccgtatctcctctgacttgtctttttcagagtacaccaccttcctgatgctgtctcctaacatcacctcagtccat gtggttaatcggaaacccctcttcactcacatggaagacaaccggttggaatacaaggtctttcttacagaggacaatct gcctagcctggaggagattcacatggctggaccagtccaggaagacgtagagatacaggtttataggaaatacgggaagg aatacggaagcgccaccaaccccgatatcgccttcagctactttaaaccgagcgaaaaggagacccacacgtggacggcc cacttcagccactgctccatgacctgtgggaatggtaacctgcaagtccgctactcctgctttgatcagtcaacaggtga gaacgtggatgacttctattgcctcaagaggccaaaacctccttcaaggcaggaaagatgccttgtggaacgctgccaac cacattggaagaaatcacagctgggcagatgttctgccctttgtggcttgggagtggccatctggaacatgacctgtgtc caggttgttgatgggctggaatccaccgtggacgagaggctgtgcgcagcggatcagaagcccccggccttcgagacttg ctccgtgaacgtctgcccactgggatggaacacgggattgaagtccgatgctctggaagaccaagaacggattggaaatc agtctgtatatgtctggagtcctttggctggaaagtgtccggtctcctgcgggggaggacggaggtggctcagttacgcc tgcttggtcttcgacacgaaagaggaaaccgaggagaatcgctgtaaccagacccagaaaccagccagccgtctagaagt ctgcaacccggagccgtgccccccaaggtggttttacaagcaaggttcgtgcagcgttacctgcggcgaaggcgttatgc gcaaggccttgtactgcgcgcgagaaatcggggaggaagaggaggaagaggaagacatattgcccgacgcggcctgtgag ggctccccgcgccccaaagagctggaagcgtgccacctgcagccttgcccccccagctggagagtgaccgagcgtggacc ctgctcctcttcgtgtgggcttggagtggccacccaatccgtggcttgcctgcagctttccggaggccgagacgtggacg tggccgagggccagtgtccagaagcggaaaagcccccctctgtcgtgccttgccttctccgcgtttgtccgtacgaatgg ggcttcaccaaatggacggagtgctctgtctcgtgtggaaccggcatccagaagcgacaggatttctgcatcaaccccca aaccaagacacgggtgaatcatctcctgtgcatgcatgttcctaagcccatgatggtgagaacgtgctccgtcatgccct gcttccaagtgaccacggtgaaggcagaccttcggcctgatgtccccacggccacccagcctccaggggcagagatcctg atcacccccgaggttactcttcctctcaaaggaccgcaggaccagaacctggatctctcatggtccaaaggagaagatcc tcagaagaaagaagccaaggctaaaccctggggagatatctcagacgaacccagtatctgtggaaggcaatggctgagcc ccagtggattaatcaacatgacgggggtgcaagccaggatctgcatggtcgccataggccggcctttaggggagaccatc accgtccaggtgttgcagagttccttgaactgcagcgcaggagaaatattactgttttcaacccggaccatgtggcggat ggcttgtaagaagctgaagctgttgatggtcaacacccaaaccaacacactgatagtgaggcaacgccggctgttgtcgg gcagtggcgttgtgctgcgctacaccagcagactggcggagaagaaacaccaccaagcctgtgataggcagctgtttggt ccccgggggctcatcctgaatccagcaccgtcactggatggggaacgacaaatggcctgcaggatatttatcgatgtggc gccccacctgcgcattgccatccatgcggtgtacgtggaattccaaaccacagccaacgaaacacactccagctatatct cgattcgagatgtcgaatccttgaggactaccgtcttccatgggaaccggcttttctactgggaatccatcggcagccga gccgaaatcgaattcaaccaagccctggccaatttcatcgaatttgcaaatgttgtctcggccagggtagacaagcttcg tccgtggcagaaggcagttttctattgtgggatggctgtattcccggttattctaagcctgactttgaccaccttgttcg gcaacgccattgcctttgccacgggcgtgctttatgggctgtctgcgctgggtaaaaagggagatgccattgcatacgcc aggatgcaacaaattcaacaaaagccagccggcagcgatgggacgacggaaaacgtgcaggcccagttggtgtgatgctt tcacgacactttttgaaccagcctcttcccgattcggggcaccggacacttcagctccgagtcctccttgtgtactttga aatgcttccaaaattaattccaggattaagggactttttttaaaaaaaaaacacaacgccctgaatttctgcatcactgt gaatcttgatatgctgcagtttttaaggatttaaaaaaagggctttgtcttgtcttctctgacacctcccagccctgctt aatatctcaagtcgaagtggaagcaagtcagctgaaatcaagaaaaatcttcccagcaaggcggttttccaaaaagatgg aaatcttttggtttgcatctcaaattttgaagagttgggcaggagaaatatcttcccttccacggcttttaaaaagctct gcctctttcccacttcacaacttggacgacaaaacacaacagatgtgggtacgtgcagggggaagaatgaaataagggat gtttgaatcggacggccaggaaccgtgtgtcgcggtgatgtccaaccttatttgggggtgagcatcgcagcgcgtcgaac gtccgaaattaaaagccgcggtgaaaatactctggagatcaaaaaaaattagctgctggtgatcacatccctgccacttt gatttccagcataaatccatctttggttatctttgga |
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Protein
| Protein ID | habu1_s1917_g07045.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07045.t1 MAKSLLKLFFTFLSLKVCWPSETHKTFLNSLEARDIYFYFGTNSSLEVPEFEVVPLACSCEDRQTSCGVQLCSFRASGDL LAIEFPQDRALSPPFFVSTRRLNSSASLLRRLRHHCFAGGKPLKPLGATCRVTYCEGQMQGFIRVRGKKVYIRAVKKQHQ HYLVDPHLPRPHIVFSSLQNDSASAQTSGKVSSRIRRVVEEKVKHLELLVVVGPDVHQFHKEDTERYILTNLNIEGIQIT TNITSSVLSVCKWSLKVNPENDLDPRHADLVLYVTKFDLELPDGNKQVRGVTSKGGACSRSWSCIITEDTGFGLGITVAH EIAHSFGIDHDGEGNRCVGDRHIMGSEGGHNSLDLTWSVCSREQLQAFVSTGQASCTDDLPVLKSSLPEAKPGLYFGAEE QCKIAFGSGASACTFSYDVDMCRVLSCHTNSADQSTCSRLHVPLLDGTECGINKMFGCDGRMDSGKKMDPCQLLQLFIVL VEVFTTIFYRISSDLSFSEYTTFLMLSPNITSVHVVNRKPLFTHMEDNRLEYKVFLTEDNLPSLEEIHMAGPVQEDVEIQ VYRKYGKEYGSATNPDIAFSYFKPSEKETHTWTAHFSHCSMTCGNGNLQVRYSCFDQSTGENVDDFYCLKRPKPPSRQER CLVERCQPHWKKSQLGRCSALCGLGVAIWNMTCVQVVDGLESTVDERLCAADQKPPAFETCSVNVCPLGWNTGLKSDALE DQERIGNQSVYVWSPLAGKCPVSCGGGRRWLSYACLVFDTKEETEENRCNQTQKPASRLEVCNPEPCPPRWFYKQGSCSV TCGEGVMRKALYCAREIGEEEEEEEDILPDAACEGSPRPKELEACHLQPCPPSWRVTERGPCSSSCGLGVATQSVACLQL SGGRDVDVAEGQCPEAEKPPSVVPCLLRVCPYEWGFTKWTECSVSCGTGIQKRQDFCINPQTKTRVNHLLCMHVPKPMMV RTCSVMPCFQVTTVKADLRPDVPTATQPPGAEILITPEVTLPLKGPQDQNLDLSWSKGEDPQKKEAKAKPWGDISDEPSI CGRQWLSPSGLINMTGVQARICMVAIGRPLGETITVQVLQSSLNCSAGEILLFSTRTMWRMACKKLKLLMVNTQTNTLIV RQRRLLSGSGVVLRYTSRLAEKKHHQACDRQLFGPRGLILNPAPSLDGERQMACRIFIDVAPHLRIAIHAVYVEFQTTAN ETHSSYISIRDVESLRTTVFHGNRLFYWESIGSRAEIEFNQALANFIEFANVVSARVDKLRPWQKAVFYCGMAVFPVILS LTLTTLFGNAIAFATGVLYGLSALGKKGDAIAYARMQQIQQKPAGSDGTTENVQAQLV |
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