Gene
| Gene Model ID | habu1_s1917_g07050 |
|---|---|
| Locus | habu1_scaffold1917 : 238208 ... 243155 : - |
| To GenomeBrowser | habu1_scaffold1917:238208..243155 |
| Genes list of scaffold | habu1_scaffold1917 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 60s ribosomal protein l7a | GO:0005634 GO:0005925 GO:0016020 GO:0022625 GO:0042254 GO:0042788 GO:0044822 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1917_g07050.t1 | 1 | 1 | Ribosomal_L7Ae | 131 | 169 | 6.7e-09 | 35.1 | 2.6e-12 | 3.8e-08 | 32.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1917_g07050.t1 | gi|602627372|ref|XP_007420634.1| | PREDICTED: 60S ribosomal protein L7a [Python bivittatus] | 0.0 |
| habu1_s1917_g07050.t1 | gi|558165260|ref|XP_006123788.1| | PREDICTED: 60S ribosomal protein L7a [Pelodiscus sinensis] | 0.0 |
| habu1_s1917_g07050.t1 | gi|94966839|ref|NP_001035610.1| | 60S ribosomal protein L7a [Bos taurus] | 0.0 |
| habu1_s1917_g07050.t1 | gi|426222892|ref|XP_004005614.1| | PREDICTED: 60S ribosomal protein L7a isoform X1 [Ovis aries] | 0.0 |
| habu1_s1917_g07050.t1 | gi|556779752|ref|XP_005984921.1| | PREDICTED: 60S ribosomal protein L7a [Pantholops hodgsonii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 725.7 |
| Venom grand-1 | 4158.8 |
| Pit, infrared sensing | 1384.1 |
| Nose | 759.1 |
| Brain-1 | 191.8 |
| Eye | 807.1 |
| fetal fibroblast | 1495.2 |
| venom gland-2 | 3767.3 |
| Brain-2 | 180.4 |
| Spleen | 1662.9 |
| Lung | 1321.2 |
| Liver | 2509.1 |
| Kidney | 1894.1 |
| Pancreas | 2794.0 |
| Small intestine | 2506.4 |
| Large intestine | 1441.0 |
| Stomach | 1826.5 |
| heart | 1222.2 |
| ovary | 336.9 |
| cheek muscle | 1355.5 |
Transcript
| Transcript ID | habu1_s1917_g07050.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07050.t1 tgcgatatactacccagaaggcaccgttctctctttttctccctccagccaagatgccgaagggaaagaaggccaaagga aagaaggtggctccggcccctgcggtggtcaagaagcaggaggccaagaaggtggtcaaccccctctttgagaagagacc caaaaactttggcatcggccaggatatccagcccaaacgagacttgacccgctttgtgaaatggcctcgctacatcagac tccagcgccagcgggccatcctttacaaaaggttgaaggtgcccccggcagtgaaccagttcacccaagccctggaccga cagacggcaactcagcttctgaagctggctcacaaatacaggcctgagaccaagcaagagaagaaacagagattgttggc tcgggcagagcagaaagccgcggggaagggcgacgtcccaaccaaaaggccgcctgtgctgcgagcaggtgtcaacacag tcacaaccttggtggagaacaagaaggctcagctggtggtgatcgcacacgacgtagaccccattgagatccgtcgtcac tggggtggaaacgtcctgggtcccaaatctgtcgctcggattgctaaacttgaaaaagccaaagctaaggaactggccac caagcttggatagacgtgtcagtttttctgtacataaaaataaaattctaaacaaaaggcccttgt |
|
Protein
| Protein ID | habu1_s1917_g07050.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07050.t1 MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAV NQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEQKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHD VDPIEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG |
|