Gene
| Gene Model ID | habu1_s1917_g07052 |
|---|---|
| Locus | habu1_scaffold1917 : 248936 ... 252637 : + |
| To GenomeBrowser | habu1_scaffold1917:248936..252637 |
| Genes list of scaffold | habu1_scaffold1917 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1917_g07052.t1 | 1 | 1 | SURF6 | 139 | 343 | 0.0 | 159.8 | 0.0 | 0.0 | 159.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1917_g07052.t1 | gi|602627366|ref|XP_007420631.1| | PREDICTED: surfeit locus protein 6 [Python bivittatus] | 0.0 |
| habu1_s1917_g07052.t1 | gi|558165239|ref|XP_006123783.1| | PREDICTED: surfeit locus protein 6 [Pelodiscus sinensis] | 0.0 |
| habu1_s1917_g07052.t1 | gi|530599647|ref|XP_005293319.1| | PREDICTED: surfeit locus protein 6 [Chrysemys picta bellii] | 0.0 |
| habu1_s1917_g07052.t1 | gi|591372773|ref|XP_007061087.1| | PREDICTED: surfeit locus protein 6 [Chelonia mydas] | 0.0 |
| habu1_s1917_g07052.t1 | gi|564233167|ref|XP_006260952.1| | PREDICTED: surfeit locus protein 6 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.6 |
| Venom grand-1 | 7.9 |
| Pit, infrared sensing | 11.0 |
| Nose | 6.4 |
| Brain-1 | 2.6 |
| Eye | 5.1 |
| fetal fibroblast | 32.4 |
| venom gland-2 | 14.1 |
| Brain-2 | 2.5 |
| Spleen | 13.4 |
| Lung | 6.4 |
| Liver | 24.3 |
| Kidney | 21.2 |
| Pancreas | 28.5 |
| Small intestine | 9.5 |
| Large intestine | 8.0 |
| Stomach | 17.8 |
| heart | 6.8 |
| ovary | 51.6 |
| cheek muscle | 19.2 |
Transcript
| Transcript ID | habu1_s1917_g07052.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07052.t1 agcctacctctccagccacgtgggtgaaaagctggccgagcgcgccttgctttgcgcgcggggtttttccttttgcgcct cttttgcgccccccgatcctgagcccgctccggatacccttctcccccctcaccaccaccaggatttcatctcagtggca aaacagatgaagggccaaacggcgatgtgaaacccccatcatttcagtggtgtttttcctctggagaaaacctggtttga tcttggttgggcattgctctaaaatggccagcttagttgctacggactgttacttgcaaatggtggcaaagaagatttgc acccaggaagtccatgagccagcaaaaaggaagtttggagtgccgggaagcaggctgagggacgagagcacccagcccaa gaagaagaaaaagaaagaaagaaatcagaaaaagaaaaatacggtgggggcttctgggagcaaattcagccaagcatcgc cagccaaaccagcaagttccaacgctaaaaagccaggcccagttactccaatcacacctggtgccagtggagaggaaaga aatgggaaacaaacaccggtaacacctggtgttacagggagtaataagacatctgacacgaattttgcaatggatttctt gcggcagaggctacacaacaaaattcaagaaatatctgggaaggccggtgcccaagctctgtcacccaccgttctggaga agcgccagcgaaggaaatacgaacgagagcgaaagaaacgccggaggaaagagatcaaaatgaaggagaaattagagcag aaaacagcagaagaggcgtcgtccgccatggattcggagacccagcaagtggagagcaaggctgacatcttgtttaacaa ggtggaggtccacgcggaagaggagctgaacaaagtgaagaagaggggggataaaagaaaatccgtaaaaggaaatataa cgccactgaccggcaagaattataaacaactcttgaaccggctggagtctcggaagactaagctggaagagctgaaggcc aaagatgaggagaaagctaaggagttggaagcaaagatgcagtggacaaatgttctttacaaggcagaaggtgtaaagat ccgtgatgacgaagagaagctgaaggccgccctgaaacgcaaggagaagcgtaaggcccagcgtcagaggaaatgggaaa agcggacagagcaggtggtggacagaatgcagcagcgacaagagaaacgtcgcaagaacatccagcagaagaagctgaac aggatcgagaagaagaaggctaaagctcggaagaaaggccgcattcttcctgaagatctgaagaaagctggctctaagtg aaactgagttttaacccaatctgggtttgaatgaatagtgtgatggatgttagagaacccacaaaaatcttcctctgagc tgatgggacatggagatgatgcaaccaagtctgtttgggtcaacccttagtttgaggaggacctcaaacttctttctgaa gtctctctacaagtcattagattgccgctttccacacgttgtctatcaaattatcctttcctgttttggggagtgagact tgaagtcctgttaagtagaatcatggggtgagaggatggcatttatcctcttaatgtttggaataaattaaaggaaagcg gggattattaaattttctattctagtctgcattc |
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Protein
| Protein ID | habu1_s1917_g07052.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07052.t1 MVAKKICTQEVHEPAKRKFGVPGSRLRDESTQPKKKKKKERNQKKKNTVGASGSKFSQASPAKPASSNAKKPGPVTPITP GASGEERNGKQTPVTPGVTGSNKTSDTNFAMDFLRQRLHNKIQEISGKAGAQALSPTVLEKRQRRKYERERKKRRRKEIK MKEKLEQKTAEEASSAMDSETQQVESKADILFNKVEVHAEEELNKVKKRGDKRKSVKGNITPLTGKNYKQLLNRLESRKT KLEELKAKDEEKAKELEAKMQWTNVLYKAEGVKIRDDEEKLKAALKRKEKRKAQRQRKWEKRTEQVVDRMQQRQEKRRKN IQQKKLNRIEKKKAKARKKGRILPEDLKKAGSK |
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