Gene
| Gene Model ID | habu1_s1917_g07056 |
|---|---|
| Locus | habu1_scaffold1917 : 364287 ... 369605 : - |
| To GenomeBrowser | habu1_scaffold1917:364287..369605 |
| Genes list of scaffold | habu1_scaffold1917 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger protein gfi-1b | GO:0005634 GO:0031323 GO:0044260 GO:0044699 GO:0046872 GO:0060255 GO:0080090 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1917_g07056.t1 | 6 | 1 | zf-C2H2 | 165 | 188 | 1.0e-29 | 101.0 | 2.8e-07 | 0.00015 | 21.8 |
| habu1_s1917_g07056.t1 | 1 | 1 | zf-C2H2_jaz | 165 | 184 | 3.5e-20 | 71.5 | 9.0e-07 | 0.00048 | 20.1 |
| habu1_s1917_g07056.t1 | 5 | 1 | zf-H2C2_2 | 180 | 205 | 3.9e-34 | 115.2 | 1.3e-08 | 7.0e-06 | 26.0 |
| habu1_s1917_g07056.t1 | 6 | 2 | zf-C2H2 | 194 | 216 | 1.0e-29 | 101.0 | 2.1e-06 | 0.0011 | 19.1 |
| habu1_s1917_g07056.t1 | 5 | 2 | zf-H2C2_2 | 208 | 233 | 3.9e-34 | 115.2 | 7.3e-09 | 3.9e-06 | 26.8 |
| habu1_s1917_g07056.t1 | 6 | 3 | zf-C2H2 | 222 | 244 | 1.0e-29 | 101.0 | 2.2e-08 | 1.2e-05 | 25.3 |
| habu1_s1917_g07056.t1 | 4 | 1 | zf-C2H2_4 | 222 | 244 | 8.1e-23 | 79.0 | 2.3e-06 | 0.0012 | 19.0 |
| habu1_s1917_g07056.t1 | 5 | 3 | zf-H2C2_2 | 237 | 260 | 3.9e-34 | 115.2 | 6.0e-07 | 0.00032 | 20.8 |
| habu1_s1917_g07056.t1 | 6 | 4 | zf-C2H2 | 250 | 272 | 1.0e-29 | 101.0 | 4.0e-06 | 0.0021 | 18.2 |
| habu1_s1917_g07056.t1 | 4 | 2 | zf-C2H2_4 | 250 | 268 | 8.1e-23 | 79.0 | 8.1e-06 | 0.0043 | 17.2 |
| habu1_s1917_g07056.t1 | 5 | 4 | zf-H2C2_2 | 265 | 288 | 3.9e-34 | 115.2 | 1.4e-10 | 7.2e-08 | 32.3 |
| habu1_s1917_g07056.t1 | 1 | 1 | zf-C2H2_6 | 277 | 300 | 1.8e-11 | 43.4 | 3.7e-07 | 0.0002 | 21.1 |
| habu1_s1917_g07056.t1 | 6 | 5 | zf-C2H2 | 278 | 300 | 1.0e-29 | 101.0 | 4.6e-08 | 2.4e-05 | 24.3 |
| habu1_s1917_g07056.t1 | 4 | 3 | zf-C2H2_4 | 278 | 300 | 8.1e-23 | 79.0 | 6.0e-06 | 0.0032 | 17.7 |
| habu1_s1917_g07056.t1 | 5 | 5 | zf-H2C2_2 | 292 | 315 | 3.9e-34 | 115.2 | 3.4e-09 | 1.8e-06 | 27.9 |
| habu1_s1917_g07056.t1 | 6 | 6 | zf-C2H2 | 306 | 329 | 1.0e-29 | 101.0 | 2.8e-06 | 0.0015 | 18.7 |
| habu1_s1917_g07056.t1 | 4 | 4 | zf-C2H2_4 | 306 | 329 | 8.1e-23 | 79.0 | 5.6e-06 | 0.003 | 17.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1917_g07056.t1 | gi|602636829|ref|XP_007425266.1| | PREDICTED: zinc finger protein Gfi-1b [Python bivittatus] | 0.0 |
| habu1_s1917_g07056.t1 | gi|663272751|ref|XP_008495500.1| | PREDICTED: zinc finger protein Gfi-1b [Calypte anna] | 0.0 |
| habu1_s1917_g07056.t1 | gi|558225102|ref|XP_006136892.1| | PREDICTED: zinc finger protein Gfi-1b [Pelodiscus sinensis] | 0.0 |
| habu1_s1917_g07056.t1 | gi|700373679|ref|XP_009932521.1| | PREDICTED: zinc finger protein Gfi-1b [Opisthocomus hoazin] | 0.0 |
| habu1_s1917_g07056.t1 | gi|699593164|ref|XP_009867177.1| | PREDICTED: zinc finger protein Gfi-1b [Apaloderma vittatum] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.3 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.5 |
| Nose | 0.2 |
| Brain-1 | 0.3 |
| Eye | 0.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.1 |
| Spleen | 0.6 |
| Lung | 3.4 |
| Liver | 1.0 |
| Kidney | 0.0 |
| Pancreas | 0.4 |
| Small intestine | 0.1 |
| Large intestine | 0.3 |
| Stomach | 0.3 |
| heart | 0.6 |
| ovary | 16.9 |
| cheek muscle | 0.6 |
Transcript
| Transcript ID | habu1_s1917_g07056.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07056.t1 aaacttggatcccgtgagcgaggggacgccgcaacgttgcaggtgtgaaaaacggtcttaagtcgggggtttttcagtgc cgttgtgaacgggagatgccccgctcattcttagtgaaaaataggaaggttcactcccaccatgatcgtgcagtggatga cagcatcctgctgcccaggtgggacacaggaccctcagcagcctttcctgccgttatttctgaggacagcattcccgaag atagcaaagccttccaggcagatagtccaccgtgctgttctccaaaagaggaccaggatctccagagagacaaagaggaa cattttcccgttcagaatataacactgacggcaccagagcagccaaatcaagaggtgcccatcccggctttaaaacccca agaggagaacgcgtccacttactacagccccagttttgcctggaatgccttccgccctccgttcggctacagatcaatga cttccaccatgctggagcactccattcatctgtatggcagcccaatccttcctgcctcggacctccctcttgattacagc atgcccttctcggccgagatggagacctaccactgcgtcatctgcaacaaaatgttttctaccccccacggcctggaggt ccacgtgcggcggtcccacagcggcacccggccttttgcttgcagcgtttgtgggaaaacctttggccacgcggtcagct tggagcaacacactaacatccactctcaggagaaaagctttgagtgcaaaatgtgtggaaagacgttcaagcggtcgtcc accttgtccactcacctgctgatccactcggacacccggccgtatccctgccaatactgcgggaagcgcttccatcagaa gtcggatatgaagaagcacacctacattcacacaggggaaaagccgcacaaatgccaggtctgcggcaaagccttcagcc aaagctctaacctcatcacgcacagccgcaagcacaccggcttcaaaccgttcacctgcgagctctgcgggcgaggtttc cagcgcaaggtggatcttcggcgtcaccgggagagccagcacagcctcaagtgaaaggggattcccatcttggcattcac tgtggcagatggtcgggagcgtgtggcccaagagctgtcagcagtccttggcccagattgtaaatcccacccactttggc tctagctccacccgttttgcttctgaccccgcctgctttgggccttggcgccacccaccggtggaaggtagatctcagat tgaatctacagccgggaagcctttggcccatcttaaaaaccccgttgggttaagagtggtagaaaaataagaaataaaat tcctctctttttcaccaagctgagatgtggagaataaaggagcaaggatgtgaattggtttgtgaagtcagagagagaga gagagagaaagagggcaaaagaatctggatttgccatgtttctgtgactttcgcaacgcaacgaagttcagattagaaga ctaagttaacgggaagtgtttagtagatgtaactaggttgaataggtaaggcaaatctgcaaaactacccataaaaaaaa aaaacaaatcagacaccaggtttccgtggtggaagacaaaggatctggtgttcaggatatttccatcgctatccatgatt tgcatgatccattgtgcaaaagtatgaagattttgcctctgtttgaatctctgtttcctgagggaaaaaaaaaaacctga agtcaataaatgctgttaacaaactgtttgag |
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Protein
| Protein ID | habu1_s1917_g07056.t1 |
|---|---|
| Definition | - |
>habu1_s1917_g07056.t1 MPRSFLVKNRKVHSHHDRAVDDSILLPRWDTGPSAAFPAVISEDSIPEDSKAFQADSPPCCSPKEDQDLQRDKEEHFPVQ NITLTAPEQPNQEVPIPALKPQEENASTYYSPSFAWNAFRPPFGYRSMTSTMLEHSIHLYGSPILPASDLPLDYSMPFSA EMETYHCVICNKMFSTPHGLEVHVRRSHSGTRPFACSVCGKTFGHAVSLEQHTNIHSQEKSFECKMCGKTFKRSSTLSTH LLIHSDTRPYPCQYCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFTCELCGRGFQRKVD LRRHRESQHSLK |
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