Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1917_g07059
Locus habu1_scaffold1917 : 410856 ... 444255 : +
To GenomeBrowser habu1_scaffold1917:410856..444255
Genes list of scaffold habu1_scaffold1917

Annotation by Blast2GO
Annotation GO
adenylate kinase 8 GO:0016310 GO:0019205 GO:1901293

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1917_g07059.t2 2 1 AAA_17 59 165 2.2e-15 57.5 7.8e-10 3.9e-07 30.9
habu1_s1917_g07059.t2 2 1 AAA_18 60 177 2.1e-14 53.9 6.1e-11 3.0e-08 34.0
habu1_s1917_g07059.t2 1 1 AAA_33 60 177 1.7e-09 37.7 2.0e-06 0.001 18.9
habu1_s1917_g07059.t2 2 1 ADK 62 261 3.0e-33 114.8 1.6e-14 8.1e-12 45.2
habu1_s1917_g07059.t2 2 2 AAA_17 296 341 2.2e-15 57.5 7.0e-08 3.5e-05 24.6
habu1_s1917_g07059.t2 2 2 AAA_18 297 387 2.1e-14 53.9 6.8e-06 0.0034 17.7
habu1_s1917_g07059.t2 1 1 AAA 297 329 1.4e-07 31.7 7.3e-06 0.0036 17.4
habu1_s1917_g07059.t2 2 2 ADK 299 391 3.0e-33 114.8 2.1e-21 1.0e-18 67.6

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 2.3
Venom grand-1 0.8
Pit, infrared sensing 3.0
Nose 9.8
Brain-1 1.0
Eye 1.8
fetal fibroblast 1.3
venom gland-2 0.3
Brain-2 1.0
Spleen 0.4
Lung 2.2
Liver 0.0
Kidney 1.1
Pancreas 0.2
Small intestine 0.1
Large intestine 0.2
Stomach 0.1
heart 0.3
ovary 2.5
cheek muscle 0.3

Transcript
Transcript IDhabu1_s1917_g07059.t1
Definition-
>habu1_s1917_g07059.t1
agcgacgcgcggttgctaggggcgccatggacgctaccaagaggcctctgtacatccccccgcagatggggctctacgcg
gagaagcaccgtcttttcgacatgatgcaggaattgctgggaaatttgctaatccaccggccggagaaccccctggactt
cttgataaggcagttaaaattcagcaactgtgacgctccaaggatctttctacttggccctccagcctctgggaaaacta
ctattgcgatgtggctgagtaaacaattgataattccccgtatttcccgggagagtttgttaaccaatgaatggtcagcc
ctatcaagtgaagtgcaaggatatcgggagaggaagcagaacattcctgaagacctgtgggcccagctgattgaggaacg
catgaagcttgacgactgtctctgcagcggttggatccttgaaggatttcctgacagccgagaacttgccaggtgcctgc
aagtccgggggatcattcctagacacgtcgtggtgctctacgctcccgatatcgtgctgatcgagcggaatctgggaaag
agagtggatgaaatcaccggagaggtgtaccacaccacttttgattggcccactgacgaaaacatccgttggcgtttgaa
ggcaccccgaggcatatctgaaaaagagaccgctcagaggttgctggaatatcaccgaaacttcccaggaatcgttcaat
cctttgggaagtccatgaagttaatcaatgcggaccaactctgtgcagatgccttctggcaagttctgtcacatgtccga
caaccgcctcaaacgcccgctccgttctcaccgcggattcttctctgcggacctccaggatctgggaaaagtctgcaggc
agctttgctcgctcagaaatacggcctcatcaatgtttgctgtgcgcaaatgcttaaggaagctgctaccaacgatacca
gactcgggaagttcattaagccctacctggacggaggatggccagtgccagacaagattgtcatcaaactcctgtccaaa
cggatcaacagactggattgctacattcgaggttgggtcctgcacggtttcccaaaagatgaagatcaagccaaacgtat
gccgggtgccgggatttatccgaacagccgtttgaagagctctgctttagccttatcttacacctctattaattgagcta
ataaaacctccatgaccttatcagggt
Transcript IDhabu1_s1917_g07059.t2
Definition-
>habu1_s1917_g07059.t2
agcgacgcgcggttgctaggggcgccatggacgctaccaagaggcctctgtacatccccccgcagatggggctctacgcg
gagaagcaccgtcttttcgacatgatgcaggaattgctgggaaatttgctaatccaccggccggagaaccccctggactt
cttgataaggcagttaaaattcagcaactgtgacgctccaaggatctttctacttggccctccagcctctgggaaaacta
ctattgcgatgtggctgagtaaacaattgataattccccgtatttcccgggagagtttgttaaccaatgaatggtcagcc
ctatcaagtgaagtgcaaggatatcgggagaggaagcagaacattcctgaagacctgtgggcccagctgattgaggaacg
catgaagcttgacgactgtctctgcagcggttggatccttgaaggatttcctgacagccgagaacttgccaggtgcctgc
aagtccgggggatcattcctagacacgtcgtggtgctctacgctcccgatatcgtgctgatcgagcggaatctgggaaag
agagtggatgaaatcaccggagcctggtcctgtcagatgtttggagaacagatcttgtcaaaattcctcatactatcaga
gagtcctccccacggtcccgaggtgtaccacaccacttttgattggcccactgacgaaaacatccgttggcgtttgaagg
caccccgaggcatatctgaaaaagagaccgctcagaggttgctggaatatcaccgaaacttcccaggaatcgttcaatcc
tttgggaagtccatgaagttaatcaatgcggaccaactctgtgcagatgccttctggcaagttctgtcacatgtccgaca
accgcctcaaacgcccgctccgttctcaccgcggattcttctctgcggacctccaggatctgggaaaagtctgcaggcag
ctttgctcgctcagaaatacggcctcatcaatgtttgctgtgcgcaaatgcttaaggaagctgctaccaacgataccaga
ctcgggaagttcattaagccctacctggacggaggatggccagtgccagacaagattgtcatcaaactcctgtccaaacg
gatcaacagactggattgctacattcgaggttgggtcctgcacggtttcccaaaagatgaagatcaagccaaacgtatgc
cgggtgccgggatttatccgaacagccgtttgaagagctctgctttagccttatcttacacctctattaattgagctaat
aaaacctccatgaccttatcagggt

Protein
Protein IDhabu1_s1917_g07059.t1
Definition-
>habu1_s1917_g07059.t1
MDATKRPLYIPPQMGLYAEKHRLFDMMQELLGNLLIHRPENPLDFLIRQLKFSNCDAPRIFLLGPPASGKTTIAMWLSKQ
LIIPRISRESLLTNEWSALSSEVQGYRERKQNIPEDLWAQLIEERMKLDDCLCSGWILEGFPDSRELARCLQVRGIIPRH
VVVLYAPDIVLIERNLGKRVDEITGEVYHTTFDWPTDENIRWRLKAPRGISEKETAQRLLEYHRNFPGIVQSFGKSMKLI
NADQLCADAFWQVLSHVRQPPQTPAPFSPRILLCGPPGSGKSLQAALLAQKYGLINVCCAQMLKEAATNDTRLGKFIKPY
LDGGWPVPDKIVIKLLSKRINRLDCYIRGWVLHGFPKDEDQAKRMPGAGIYPNSRLKSSALALSYTSIN
Protein IDhabu1_s1917_g07059.t2
Definition-
>habu1_s1917_g07059.t2
MDATKRPLYIPPQMGLYAEKHRLFDMMQELLGNLLIHRPENPLDFLIRQLKFSNCDAPRIFLLGPPASGKTTIAMWLSKQ
LIIPRISRESLLTNEWSALSSEVQGYRERKQNIPEDLWAQLIEERMKLDDCLCSGWILEGFPDSRELARCLQVRGIIPRH
VVVLYAPDIVLIERNLGKRVDEITGAWSCQMFGEQILSKFLILSESPPHGPEVYHTTFDWPTDENIRWRLKAPRGISEKE
TAQRLLEYHRNFPGIVQSFGKSMKLINADQLCADAFWQVLSHVRQPPQTPAPFSPRILLCGPPGSGKSLQAALLAQKYGL
INVCCAQMLKEAATNDTRLGKFIKPYLDGGWPVPDKIVIKLLSKRINRLDCYIRGWVLHGFPKDEDQAKRMPGAGIYPNS
RLKSSALALSYTSIN

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