Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1961_g07123
Locus habu1_scaffold1961 : 1 ... 9271 : +
To GenomeBrowser habu1_scaffold1961:1..9271
Genes list of scaffold habu1_scaffold1961

Annotation by Blast2GO
Annotation GO
nicotinamide n- partial EC:2.1.1.0 GO:0008168 GO:0032259

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1961_g07123.t1 1 1 NNMT_PNMT_TEMT 35 96 2.2e-20 72.6 1.8e-24 2.6e-20 72.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1961_g07123.t1 gi|602643204|ref|XP_007444837.1| PREDICTED: nicotinamide N-methyltransferase-like [Python bivittatus] 4.0e-22
habu1_s1961_g07123.t1 gi|73955126|ref|XP_546514.2| PREDICTED: nicotinamide N-methyltransferase [Canis lupus familiaris] 5.0e-22
habu1_s1961_g07123.t1 gi|511851193|ref|XP_004749926.1| PREDICTED: nicotinamide N-methyltransferase [Mustela putorius furo] 6.0e-22
habu1_s1961_g07123.t1 gi|704474384|ref|XP_010071930.1| PREDICTED: nicotinamide N-methyltransferase [Pterocles gutturalis] 6.0e-22
habu1_s1961_g07123.t1 gi|664744068|ref|XP_008529360.1| PREDICTED: LOW QUALITY PROTEIN: nicotinamide N-methyltransferase-like [Equus przewalskii] 6.0e-22

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.0
Brain-1 0.1
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.0
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.2
Pancreas 0.0
Small intestine 0.0
Large intestine 0.1
Stomach 0.0
heart 0.1
ovary 0.0
cheek muscle 0.0

Transcript
Transcript IDhabu1_s1961_g07123.t1
Definition-
>habu1_s1961_g07123.t1
cacaactgatttggaacagctttcaagcgccaaagaattgaggcctttgaactctggtgctggagaagactcctgcgagt
cccctggactgcaaggcgatccaaccgatggcatccagggagacaccctgatcgacattggcattggcccatccatctac
cacttcctctccacctgcgaatccatccgggagatcatagccatcgattacactgaccagaactggggggagatgcagca
atggttgaagaaggaactgggggcttttgactggatccccatcatgaaataggtctgtgagttggagggagacaggtatg
gagaaagaagccacattggccacgtagctacccttcatttaacaacttcttgttgttaaacaacttctccgtggtttatg
tccacaaagaagatatactaggtttaagaaagatgcaactttcctgacgtgtatgtttttttttgtctaaaataaataaa
ataaaataaaataaaataaaataataataaaataaaataaaataaaataataaaataataaaataaaacaaaacaa

Protein
Protein IDhabu1_s1961_g07123.t1
Definition-
>habu1_s1961_g07123.t1
TTDLEQLSSAKELRPLNSGAGEDSCESPGLQGDPTDGIQGDTLIDIGIGPSIYHFLSTCESIREIIAIDYTDQNWGEMQQ
WLKKELGAFDWIPIMK

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