Gene
| Gene Model ID | habu1_s1961_g07128 |
|---|---|
| Locus | habu1_scaffold1961 : 212266 ... 224336 : + |
| To GenomeBrowser | habu1_scaffold1961:212266..224336 |
| Genes list of scaffold | habu1_scaffold1961 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| g protein-activated inward rectifier potassium channel 4-like | GO:0005242 GO:0008076 GO:0034765 GO:0071805 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1961_g07128.t1 | 1 | 1 | IRK | 231 | 554 | 0.0 | 475.5 | 0.0 | 0.0 | 475.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1961_g07128.t1 | gi|530595816|ref|XP_005291465.1| | PREDICTED: G protein-activated inward rectifier potassium channel 4-like [Chrysemys picta bellii] | 0.0 |
| habu1_s1961_g07128.t1 | gi|557288089|ref|XP_006026741.1| | PREDICTED: G protein-activated inward rectifier potassium channel 4-like [Alligator sinensis] | 0.0 |
| habu1_s1961_g07128.t1 | gi|697469560|ref|XP_009668387.1| | PREDICTED: G protein-activated inward rectifier potassium channel 4-like [Struthio camelus australis] | 0.0 |
| habu1_s1961_g07128.t1 | gi|564260667|ref|XP_006269242.1| | PREDICTED: G protein-activated inward rectifier potassium channel 4-like [Alligator mississippiensis] | 0.0 |
| habu1_s1961_g07128.t1 | gi|558211022|ref|XP_006133698.1| | PREDICTED: uncharacterized protein LOC102445763 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.6 |
| Nose | 0.9 |
| Brain-1 | 0.1 |
| Eye | 5.1 |
| fetal fibroblast | 0.2 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.1 |
| Spleen | 0.1 |
| Lung | 0.1 |
| Liver | 0.1 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.1 |
| Stomach | 0.1 |
| heart | 1.0 |
| ovary | 1.3 |
| cheek muscle | 0.5 |
Transcript
| Transcript ID | habu1_s1961_g07128.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07128.t1 aaagaagttatcttgaatgtattgctggaaggaatagttggctcctgtgggattcctggctgcttctgttgaggaaaaag gctcccaggtccagtttataatgtaaggctctctccttggaggaaacacgatgtttggaattagaccaccttttgatctg aagtagccatggtgctacctaattgtaggagcaacatagaattgcagcttgaggacaatctttacgtctacaagaacagc ggagatgagctgctgaagtatgatgactccagggtccgcaggaattccattcccccagctaagatccccactgcaaagta catgttggcttatcttccacggcctccctcagaaacagatagccacggggcctcttctccgaagcctgaaatgatgacac ctttagacatgagccagcagccagcagcgaccgtgagcgccgacagaagtgctctctcttgcaactatcaccccgtacct tgcagttcgcatgtgcccaacgtcaggtccgtccttctgcagaaaagactcagcatggtggaacaggccagcttcagcgt ggctgggcctcccaaacaccagcctcctttctccaacagcacagacaagttgcctaagtattgctggccctcccggaccg accccctacccccttctctcttgcgggagttcaacgctcagctctgccctcagcatgcttttagcgtgcccaacatcatc agctcttcccggagcaagaccctcacccgcagcgtcatctcgatgcccacctcggagaaagcacagagcaaactctgcaa actcattgacgacaaccggcagttcgtggggagaaataagcagcaaaggcagcgctacgtaaccaaagtcgggaagtgca aggtcagcttaggcaacattcaggagaagaaaagattcctctctgacatttttaccaccattgtggatctcaagtatcgc tggttcctcttcatcttcagcatgtgttacatcatcacctgggtggtcttcggcatcacgtattacctggatgcctggat acgagacgacatcaaccacatcggggatgttgaatggaaggcttgcatcgagaacgtcgataacttcatctcagccttgc tgttctcggtggaaagtcaacgcacaattggctatggctcccgcattgtgacagccaactgttctgagggagtcctcttg ctgatggcccagtccatcattggttccatgatagatgccctcatggtgggatgcatgtttgtcaagatctccagacccaa gaagcgtgcccaaactttaatcttcagcaagaagtgtgtgatctccagccgggatgagaagctttgtctcatgttccgca ttggagaccttcgagatagtcacatggtggacgcaaaaataagagccaaactcattaaatccaggcaaaccaaggaagga gagttcatcccgctcgaccaatcagaactgaatctgggctatggcactggggaggaccgtctcttcctggtggagcccca gataatttgtcacatcatcaacgaggtcagccctttctgggagatgtctgcagaggcgctgaagagggagcagtttgaaa tcatcataatcctcgaaggcattgtggaagccacaggaatgacatgtcaagccaggacatcgtacatcgagaatgaaatt ctctggggccatcgctttgagccctgcatgaccctggaaaaaggtgccttccacgtagattacaccaaatttgagaagac ttttgaggtgcagacgccgctgctgagcgcacgcgagatctacaacatgaaggagatggagaatcaggagcaatcaacgc tgaacttctactgggatcatctggcccagccttgctgttcggtagagcccaaccatgaagcccaacgagggggctgtccc aacgaggaaagctgctccaacttcacggagaagaggaacaatgaataccggaaccatagtaccagactctaagcatttcg aaccagctttttcagcttctgtgaaccaacaaggaggaaaagaaacagctgcgcatcgcttcctcgtagtgcggttgtgt tgcaatccagggcggaatcaaatgtaaagcagagcattgtcttgtttggataccatttgggatccagatcaaaaactcct gactaaagcagtcatgactttggattagtcctccaatcaccacccttcccactcagagctggaaacattccagaatctat gttgcactcccaggggattgtctaggaattgtggtttctgcaagcagagatcacacgtggaacctgttgcactttaaaaa caaaaaaggttgaactacttttgtaggcatgcctgtccttgtccaaagtggtggaacttgtccagttatttgaaatgtgt ttgtttgttttgccacagggaaaaccgggacttaacttgtatcagttttctgcaggccactcggtcctttttgctgtgcc ccacaccttgcagatatctgcgctgcagcatcctaagccactggcctggccacggcaatgaatgtgtttcatcttttatg gtgccataggagctcacggtgggtgttgccccaacccctttctccaccggcccacctgggccttttacctttttttttgc cgaactgatgcctttggttcccgaactccccttctgtacctgttgcagggtccgtgttattattgtaagcaagtttttct tttgtccacaagggtgtctggagtgggggggaggaccctggaaagcaataaagttccttttcgcagagcacttg |
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Protein
| Protein ID | habu1_s1961_g07128.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07128.t1 MVLPNCRSNIELQLEDNLYVYKNSGDELLKYDDSRVRRNSIPPAKIPTAKYMLAYLPRPPSETDSHGASSPKPEMMTPLD MSQQPAATVSADRSALSCNYHPVPCSSHVPNVRSVLLQKRLSMVEQASFSVAGPPKHQPPFSNSTDKLPKYCWPSRTDPL PPSLLREFNAQLCPQHAFSVPNIISSSRSKTLTRSVISMPTSEKAQSKLCKLIDDNRQFVGRNKQQRQRYVTKVGKCKVS LGNIQEKKRFLSDIFTTIVDLKYRWFLFIFSMCYIITWVVFGITYYLDAWIRDDINHIGDVEWKACIENVDNFISALLFS VESQRTIGYGSRIVTANCSEGVLLLMAQSIIGSMIDALMVGCMFVKISRPKKRAQTLIFSKKCVISSRDEKLCLMFRIGD LRDSHMVDAKIRAKLIKSRQTKEGEFIPLDQSELNLGYGTGEDRLFLVEPQIICHIINEVSPFWEMSAEALKREQFEIII ILEGIVEATGMTCQARTSYIENEILWGHRFEPCMTLEKGAFHVDYTKFEKTFEVQTPLLSAREIYNMKEMENQEQSTLNF YWDHLAQPCCSVEPNHEAQRGGCPNEESCSNFTEKRNNEYRNHSTRL |
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