Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1961_g07131
Locus habu1_scaffold1961 : 294356 ... 333536 : +
To GenomeBrowser habu1_scaffold1961:294356..333536
Genes list of scaffold habu1_scaffold1961

Annotation by Blast2GO
Annotation GO
d dopamine receptor isoform x1 GO:0001591 GO:0001659 GO:0001975 GO:0001976 GO:0002027 GO:0002028 GO:0002052 GO:0005887 GO:0007194 GO:0007195 GO:0007409 GO:0007608 GO:0007625 GO:0007628 GO:0007631 GO:0008144 GO:0008285 GO:0008542 GO:0014059 GO:0021853 GO:0021984 GO:0030336 GO:0030424 GO:0030425 GO:0030432 GO:0032228 GO:0032467 GO:0032922 GO:0034776 GO:0035240 GO:0035810 GO:0035815 GO:0040018 GO:0042417 GO:0042493 GO:0042802 GO:0043266 GO:0043278 GO:0043473 GO:0045776 GO:0048148 GO:0048149 GO:0048169 GO:0048755 GO:0050482 GO:0050709 GO:0051482 GO:0051586 GO:0051898 GO:0051967 GO:0060124 GO:0060134 GO:0060158 GO:0060160 GO:1901386

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1961_g07131.t2 2 1 7TM_GPCR_Srsx 42 221 6.0e-16 58.3 1.3e-15 3.1e-12 46.1
habu1_s1961_g07131.t2 1 1 7tm_1 47 425 0.0 336.3 0.0 0.0 336.3
habu1_s1961_g07131.t2 2 2 7TM_GPCR_Srsx 361 439 6.0e-16 58.3 4.9e-07 0.0012 18.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.1
Brain-1 2.3
Eye 3.9
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 3.1
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 0.6
cheek muscle 0.0

Transcript
Transcript IDhabu1_s1961_g07131.t1
Definition-
>habu1_s1961_g07131.t1
agaccccccaatcacgcgccacctcctcctcggattctctctctctgtgtgtgtgtattttaacactgctagaaaaaaaa
gcgcgcgggggggggaaagagtcagaacaacaggatagcacaaggaagtgtcagccccatttgggctgaggactccgggg
agaatgaatcctagttatttgactttggagagaatcccctcctccttttctcttcttttagttgtttttggagcggctag
ctagtcccttcagctgaaggctcttctgcccaacccttagacccatcctttttggaggagagggtgaaactggagagtgg
ggcgtctcttctccacggggtttatccatgcttggtcggcaagacccagggttgtccttctctccgggatctcggtcaga
gagccagagacaacgggaagtcacttaacaagctcggaagagaagaaccaaaaggcggaaagggatagttagagcaagtc
cacgggaagccttgttctcctgactcttatggcttgaagcaggtgtccaaaccgagagtgcttcttctccatggatttcc
caaatatcttctggtacaatgacagctatgaaaacaggaccttcaacagctccagcctggagcagaagcccacccactat
aactactacgccatgctgttgacgctcctcatctttgtgattgtctttggcaacgtgctagtctgcatggctgtgtccaa
ggagaaagccttgcagaccaccaccaactacctgattgtcagccttgctgtggctgacctgctcgtggctacgttggtga
tgccgtgggtggtctacctggaggtggtcggtgagtggcgcttcagccgcatccactgtgacatctttgtcaccctggat
gtgatgatgtgcacagccagcattcttaatctctgcgcgatcagcattgacaggtacacagctgtggccatgcccatgct
gtacaacacccgctacagctccaagcgcagagtcactgggatgattgccgtggtgtggatcctctccttcgccatctcct
gcccactgatgtttgggctgaacaacacagagaagaatgagtgtatcattgccaaccctgcctttgttgtgtattcttct
atcgtctccttctacgttcctttcattgtcaccctgctggtatacgtgcagatctatatagtgttgcggaaacgcagaaa
acgggtcaacaccaagcgcatcgccagtcatgtgggcctggacgccgacacgcaggccccattgaaggagaaatgcgctc
atccaggagatatcaggctctgcacactccttgtgaagagcaacgggagcttccctgttcacaagggcaaagtggaggcc
atggatcacatggaagagatggagatggccactagtaccagcccaccaaagaacaatgtccagccacctctgccaagtga
catggaaccagctgagccagctgcttccaccccctgtgccaatttaactctgccatctcctgaaaacagccgcctcgacg
tgcagaagaacgggcataccatagacaattccaaaacagccaaggtctttgagattcagacaatgcccaatggcaagacc
aggacttccctcaaaactatgagcagaaggaaattttcacaacagaaggaaaagaaagccactcaaatgcttgccattgt
gcttggtgttttcatcatctgttggctccctttcttcatcacccacattctgaacatgcactgcaactgtaaaatcccac
aggtcatgtacagtgccttcacatggctcggatatgtcaacagcgcagtcaatcccatcatttacaccactttcaacatt
gagttccggaaagcttttatgaagatccttcattgctagcctctgcctggggatcagtcatctgaatcacgtgactggat
taaggctgtgtgttggagcacccagtttgagagtgccatgccaatatatttttacaactgggataccacagctgtcatgg
tccaaggttgccttgtgctcaaggaagcattgaaactctgtgagactcggacgggagagtttgtgtcaaatgcaatcttt
gcattctgctaaaacgagaaagcaagcaagccaaggctccccacaaacagctgtgtgggatcaagaagatctccaagaga
ttcatcaccaattttagctgagcccaagaaggagagaccatgacttgctcacgccttgctcttatttctcaccaaagacg
cacccattcttgcccgcttcgtaactggaggaagactccttcttcgaggaagaaacagctttcccaggaattgtgtccgt
tggcgttgccttcagacttcagggacactgtagtgtccatcaaattgccgaggccaaatcatgcagctactgttaaggct
tggagtaattgccagaccattgtcaccagacaaaaggaagggggagggggaggaggttgtgagagaatgaaaactcaggg
tggaggggagaggcagaattgtttattatatgatgccaatgtatatacaaataaatatagggaactgagcagaagcccaa
gccaaaaaaaagtgaaaaccaatcaatcaatcttgtcttgcatggaatgcattgtaattaaaaagccatctctgctcaca
tacaccagcatatgtggtagacagcaacttctccgcttccagaactgaatctccgggagaacaaatcagatctgaccgga
aggatggatggaaagatatggactacaaggcccttgtcaggcacttaatagtgaattaaagtctggagaaatctcaacca
agccaaagtgttagctcaaaggtaaacaatgtggtttgcatacatgcagaagatccatgttaaccccaagttaagcgcct
gaaattccgagtaaattattcctagtcagagaaggagatcttgagtctttaagtgtaagctagatcaattagacaacaag
ccaccttttgaatcatctgtgattagaaggactgcaaagggtgggctttcctttctctcctaagttaggcttaccttatc
tgggctgcaaaaacccactagatggcaataaagagagttttctgggtttttaaagaaatagatatggttgtcttgattct
agactagcttagattttctttttgtcctgtaggaaggaagaatagaaggggtgacgcagatggagagacctggtgcccaa
tggtataatgtagcctacatttcttgggtgatcagaaaatatctagcttgcaacatctgccctgcttgatgggcatacct
gttgaggcaggtgatccattgatgtgtttcaggattccttctgctttgctcccaacatggtgcaattttgcaagtcaacc
cacacaggagaaaaagtcgttggaaatattattttgacgaagctgcatcagacattatttttgtctggcatgctggcttc
acttctgtcaagattgtatttcccttaaagcagaacatctgggcgtttgtgctttcaagaagcttttcaggaaaaaaatt
gaaactcaattttctttaggacagaaaaatctaaataacacagttccaggttgaaggagctttattttgttttcttttcc
tcccccagatcttctgttaaattttaaaaagtattgacatccttctttgactttcctgaaagatacgtccggcaatttct
taggttaaccaaataaagtccacgtagatcttcctcatatttctatcttgaatgctcatgtgatagccaggtctccttgg
atgtcttaccttttctctacaaaatgatgactgacagttaggaatgagcaatttcatgtggtctcgggtcaattcgcctt
gattggggtggtgggaaaaccatttacagctgaaaccttttcaacctctccctctaggaaaaaaaccatcatcaagtcat
cagcaagaatggtcaagacatcggtggccaatactgttattgttaccctctaccaaattcacagtatttttgtaagatgc
tgcagaaactgtacaagccaactaataaaatgacatggaaatgggttttcc
Transcript IDhabu1_s1961_g07131.t2
Definition-
>habu1_s1961_g07131.t2
agaccccccaatcacgcgccacctcctcctcggattctctctctctgtgtgtgtgtattttaacactgctagaaaaaaaa
gcgcgcgggggggggaaagagtcagaacaacaggatagcacaaggaagtgtcagccccatttgggctgaggactccgggg
agaatgaatcctagttatttgactttggagagaatcccctcctccttttctcttcttttagttgtttttggagcggctag
ctagtcccttcagctgaaggctcttctgcccaacccttagacccatcctttttggaggagagggtgaaactggagagtgg
ggcgtctcttctccacggggtttatccatgcttggtcggcaagacccagggttgtccttctctccgggatctcggtcaga
gagccagagacaacgggaagtcacttaacaagctcggaagagaagaaccaaaaggcggaaagggatagttagagcaagtc
cacgggaagccttgttctcctgactcttatggcttgaaggtgtccaaaccgagagtgcttcttctccatggatttcccaa
atatcttctggtacaatgacagctatgaaaacaggaccttcaacagctccagcctggagcagaagcccacccactataac
tactacgccatgctgttgacgctcctcatctttgtgattgtctttggcaacgtgctagtctgcatggctgtgtccaagga
gaaagccttgcagaccaccaccaactacctgattgtcagccttgctgtggctgacctgctcgtggctacgttggtgatgc
cgtgggtggtctacctggaggtggtcggtgagtggcgcttcagccgcatccactgtgacatctttgtcaccctggatgtg
atgatgtgcacagccagcattcttaatctctgcgcgatcagcattgacaggtacacagctgtggccatgcccatgctgta
caacacccgctacagctccaagcgcagagtcactgggatgattgccgtggtgtggatcctctccttcgccatctcctgcc
cactgatgtttgggctgaacaacacagagaagaatgagtgtatcattgccaaccctgcctttgttgtgtattcttctatc
gtctccttctacgttcctttcattgtcaccctgctggtatacgtgcagatctatatagtgttgcggaaacgcagaaaacg
ggtcaacaccaagcgcatcgccagtcatgtgggcctggacgccgacacgcaggccccattgaaggagaaatgcgctcatc
caggagatatcaggctctgcacactccttgtgaagagcaacgggagcttccctgttcacaagggcaaagtggaggccatg
gatcacatggaagagatggagatggccactagtaccagcccaccaaagaacaatgtccagccacctctgccaagtgacat
ggaaccagctgagccagctgcttccaccccctgtgccaatttaactctgccatctcctgaaaacagccgcctcgacgtgc
agaagaacgggcataccatagacaattccaaaacagccaaggtctttgagattcagacaatgcccaatggcaagaccagg
acttccctcaaaactatgagcagaaggaaattttcacaacagaaggaaaagaaagccactcaaatgcttgccattgtgct
tggtgttttcatcatctgttggctccctttcttcatcacccacattctgaacatgcactgcaactgtaaaatcccacagg
tcatgtacagtgccttcacatggctcggatatgtcaacagcgcagtcaatcccatcatttacaccactttcaacattgag
ttccggaaagcttttatgaagatccttcattgctagcctctgcctggggatcagtcatctgaatcacgtgactggattaa
ggctgtgtgttggagcacccagtttgagagtgccatgccaatatatttttacaactgggataccacagctgtcatggtcc
aaggttgccttgtgctcaaggaagcattgaaactctgtgagactcggacgggagagtttgtgtcaaatgcaatctttgca
ttctgctaaaacgagaaagcaagcaagccaaggctccccacaaacagctgtgtgggatcaagaagatctccaagagattc
atcaccaattttagctgagcccaagaaggagagaccatgacttgctcacgccttgctcttatttctcaccaaagacgcac
ccattcttgcccgcttcgtaactggaggaagactccttcttcgaggaagaaacagctttcccaggaattgtgtccgttgg
cgttgccttcagacttcagggacactgtagtgtccatcaaattgccgaggccaaatcatgcagctactgttaaggcttgg
agtaattgccagaccattgtcaccagacaaaaggaagggggagggggaggaggttgtgagagaatgaaaactcagggtgg
aggggagaggcagaattgtttattatatgatgccaatgtatatacaaataaatatagggaactgagcagaagcccaagcc
aaaaaaaagtgaaaaccaatcaatcaatcttgtcttgcatggaatgcattgtaattaaaaagccatctctgctcacatac
accagcatatgtggtagacagcaacttctccgcttccagaactgaatctccgggagaacaaatcagatctgaccggaagg
atggatggaaagatatggactacaaggcccttgtcaggcacttaatagtgaattaaagtctggagaaatctcaaccaagc
caaagtgttagctcaaaggtaaacaatgtggtttgcatacatgcagaagatccatgttaaccccaagttaagcgcctgaa
attccgagtaaattattcctagtcagagaaggagatcttgagtctttaagtgtaagctagatcaattagacaacaagcca
ccttttgaatcatctgtgattagaaggactgcaaagggtgggctttcctttctctcctaagttaggcttaccttatctgg
gctgcaaaaacccactagatggcaataaagagagttttctgggtttttaaagaaatagatatggttgtcttgattctaga
ctagcttagattttctttttgtcctgtaggaaggaagaatagaaggggtgacgcagatggagagacctggtgcccaatgg
tataatgtagcctacatttcttgggtgatcagaaaatatctagcttgcaacatctgccctgcttgatgggcatacctgtt
gaggcaggtgatccattgatgtgtttcaggattccttctgctttgctcccaacatggtgcaattttgcaagtcaacccac
acaggagaaaaagtcgttggaaatattattttgacgaagctgcatcagacattatttttgtctggcatgctggcttcact
tctgtcaagattgtatttcccttaaagcagaacatctgggcgtttgtgctttcaagaagcttttcaggaaaaaaattgaa
actcaattttctttaggacagaaaaatctaaataacacagttccaggttgaaggagctttattttgttttcttttcctcc
cccagatcttctgttaaattttaaaaagtattgacatccttctttgactttcctgaaagatacgtccggcaatttcttag
gttaaccaaataaagtccacgtagatcttcctcatatttctatcttgaatgctcatgtgatagccaggtctccttggatg
tcttaccttttctctacaaaatgatgactgacagttaggaatgagcaatttcatgtggtctcgggtcaattcgccttgat
tggggtggtgggaaaaccatttacagctgaaaccttttcaacctctccctctaggaaaaaaaccatcatcaagtcatcag
caagaatggtcaagacatcggtggccaatactgttattgttaccctctaccaaattcacagtatttttgtaagatgctgc
agaaactgtacaagccaactaataaaatgacatggaaatgggttttcc

Protein
Protein IDhabu1_s1961_g07131.t1
Definition-
>habu1_s1961_g07131.t1
MDFPNIFWYNDSYENRTFNSSSLEQKPTHYNYYAMLLTLLIFVIVFGNVLVCMAVSKEKALQTTTNYLIVSLAVADLLVA
TLVMPWVVYLEVVGEWRFSRIHCDIFVTLDVMMCTASILNLCAISIDRYTAVAMPMLYNTRYSSKRRVTGMIAVVWILSF
AISCPLMFGLNNTEKNECIIANPAFVVYSSIVSFYVPFIVTLLVYVQIYIVLRKRRKRVNTKRIASHVGLDADTQAPLKE
KCAHPGDIRLCTLLVKSNGSFPVHKGKVEAMDHMEEMEMATSTSPPKNNVQPPLPSDMEPAEPAASTPCANLTLPSPENS
RLDVQKNGHTIDNSKTAKVFEIQTMPNGKTRTSLKTMSRRKFSQQKEKKATQMLAIVLGVFIICWLPFFITHILNMHCNC
KIPQVMYSAFTWLGYVNSAVNPIIYTTFNIEFRKAFMKILHC
Protein IDhabu1_s1961_g07131.t2
Definition-
>habu1_s1961_g07131.t2
MDFPNIFWYNDSYENRTFNSSSLEQKPTHYNYYAMLLTLLIFVIVFGNVLVCMAVSKEKALQTTTNYLIVSLAVADLLVA
TLVMPWVVYLEVVGEWRFSRIHCDIFVTLDVMMCTASILNLCAISIDRYTAVAMPMLYNTRYSSKRRVTGMIAVVWILSF
AISCPLMFGLNNTEKNECIIANPAFVVYSSIVSFYVPFIVTLLVYVQIYIVLRKRRKRVNTKRIASHVGLDADTQAPLKE
KCAHPGDIRLCTLLVKSNGSFPVHKGKVEAMDHMEEMEMATSTSPPKNNVQPPLPSDMEPAEPAASTPCANLTLPSPENS
RLDVQKNGHTIDNSKTAKVFEIQTMPNGKTRTSLKTMSRRKFSQQKEKKATQMLAIVLGVFIICWLPFFITHILNMHCNC
KIPQVMYSAFTWLGYVNSAVNPIIYTTFNIEFRKAFMKILHC

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Okinawa Institute of Science and Technology
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