Gene
| Gene Model ID | habu1_s1961_g07138 |
|---|---|
| Locus | habu1_scaffold1961 : 782419 ... 787078 : + |
| To GenomeBrowser | habu1_scaffold1961:782419..787078 |
| Genes list of scaffold | habu1_scaffold1961 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| interleukin- partial | GO:0001816 GO:0005615 GO:0046649 GO:0048522 GO:0071310 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1961_g07138.t1 | 1 | 1 | IL1 | 77 | 190 | 5.2e-18 | 64.6 | 5.0e-22 | 7.4e-18 | 64.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1961_g07138.t1 | gi|602631560|ref|XP_007422680.1| | PREDICTED: interleukin-18 [Python bivittatus] | 0.0 |
| habu1_s1961_g07138.t1 | gi|327289734|ref|XP_003229579.1| | PREDICTED: interleukin-18-like [Anolis carolinensis] | 0.0 |
| habu1_s1961_g07138.t1 | gi|267799492|gb|ACY79398.1| | interleukin-18 [Gallus gallus] | 2.0e-34 |
| habu1_s1961_g07138.t1 | gi|190576824|gb|ACE79188.1| | interleukin-18 [Gallus gallus] | 3.0e-34 |
| habu1_s1961_g07138.t1 | gi|45382949|ref|NP_989939.1| | interleukin-18 [Gallus gallus] | 3.0e-34 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 28.9 |
| Venom grand-1 | 7.9 |
| Pit, infrared sensing | 29.4 |
| Nose | 50.3 |
| Brain-1 | 21.3 |
| Eye | 15.3 |
| fetal fibroblast | 32.7 |
| venom gland-2 | 5.4 |
| Brain-2 | 71.9 |
| Spleen | 91.8 |
| Lung | 50.3 |
| Liver | 1.0 |
| Kidney | 9.3 |
| Pancreas | 14.0 |
| Small intestine | 104.0 |
| Large intestine | 82.1 |
| Stomach | 9.4 |
| heart | 3.3 |
| ovary | 1.4 |
| cheek muscle | 2.3 |
Transcript
| Transcript ID | habu1_s1961_g07138.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07138.t1 gccaaataaatcatgcatctctcccttcttccccagagagcaaggatgtgcagcgatatgatcgagatgctgccggtgaa tttggatggaaaaggcaatctctatttccaagaacaagtgttagaaacagacagctggagaacatcaggaaaatgtgaat ctgcccaaatcttccgaattcctaataaccatgtcctcatcgcacagccggctgacaaagatttccctgcagtatttgaa cacagaacagaccaggaaattcggaaagtatcaggtatcaaatttgacatccacagttaccaagacaccaagccaaaggg gctgtcagtggtcttcactgtggaatttaaccatcagacttacctcatgtgtgtggagaaaaaagaaaacaaaatgaggg tgaattttaaggcaggtacaattccccaccacatcgaaggagacaccagcaacatcatcttcatcaaaacacggttttcg gctggtagcaggcaattttacaagtttgaatctgctctggaaagtggctatttcctggcctttgaggatgctgaagatag ccctacgaccgtactggtggtcaagaaagtagaactggcagacgaagtggatgaatccacaaagctattccacgctccac ttctctgacaaggaaacccaagtaaaaaaataaatgagattgcaagtggtagaaaaagtgcagattttaaatggttgatg tagctttactagaattgctagaaagtatattataaaatttctgacacactcccctcgcttgatatttgaaaactgatcag tggaagtgtctaattaagagtatctaaaatttggtggggtaaataattgcactaagaaaagccacacaaatatccacagc tttgtaagaaattctaatctcaaccaattaccaataaatataaaaactagacaagagccacatagaaaatgctagataaa actaatggaatgtcaacattttaaaccttatctaggcttaggctaaggcatattttaaaaattgaaatattatattttta ataaaaactaaaattaatccagaagct |
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Protein
| Protein ID | habu1_s1961_g07138.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07138.t1 MCSDMIEMLPVNLDGKGNLYFQEQVLETDSWRTSGKCESAQIFRIPNNHVLIAQPADKDFPAVFEHRTDQEIRKVSGIKF DIHSYQDTKPKGLSVVFTVEFNHQTYLMCVEKKENKMRVNFKAGTIPHHIEGDTSNIIFIKTRFSAGSRQFYKFESALES GYFLAFEDAEDSPTTVLVVKKVELADEVDESTKLFHAPLL |
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