Gene
| Gene Model ID | habu1_s1961_g07139 |
|---|---|
| Locus | habu1_scaffold1961 : 787300 ... 795208 : - |
| To GenomeBrowser | habu1_scaffold1961:787300..795208 |
| Genes list of scaffold | habu1_scaffold1961 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1961_g07139.t1 | 1 | 1 | CybS | 113 | 217 | 6.5e-35 | 119.6 | 5.8e-39 | 8.7e-35 | 119.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1961_g07139.t1 | gi|602631573|ref|XP_007422686.1| | PREDICTED: succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, partial [Python bivittatus] | 0.0 |
| habu1_s1961_g07139.t1 | gi|530595743|ref|XP_005291429.1| | PREDICTED: succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial [Chrysemys picta bellii] | 0.0 |
| habu1_s1961_g07139.t1 | gi|558108101|ref|XP_006111331.1| | PREDICTED: succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, partial [Pelodiscus sinensis] | 0.0 |
| habu1_s1961_g07139.t1 | gi|591371504|ref|XP_007060564.1| | PREDICTED: succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial [Chelonia mydas] | 0.0 |
| habu1_s1961_g07139.t1 | gi|573909333|ref|XP_006642385.1| | PREDICTED: succinate dehydrogenase [ubiquinone] cytochrome b small subunit B, mitochondrial-like [Lepisosteus oculatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.5 |
| Venom grand-1 | 26.6 |
| Pit, infrared sensing | 13.9 |
| Nose | 8.6 |
| Brain-1 | 4.1 |
| Eye | 8.2 |
| fetal fibroblast | 16.4 |
| venom gland-2 | 21.9 |
| Brain-2 | 6.0 |
| Spleen | 13.8 |
| Lung | 11.1 |
| Liver | 21.6 |
| Kidney | 28.7 |
| Pancreas | 42.0 |
| Small intestine | 34.5 |
| Large intestine | 19.0 |
| Stomach | 31.2 |
| heart | 35.7 |
| ovary | 15.4 |
| cheek muscle | 47.5 |
Transcript
| Transcript ID | habu1_s1961_g07139.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07139.t1 cttcctcaggctgaccggggaagggggcccctccagagcctgccggagcctgggtcagtggccgcctttctgcatgagct gcgcaaagcggttggtgacagacaaggtggtgtcgatgaagcggttgacacagttggccaggcaggtctcggtccgggag tcgagcttggagccgggcttgtccacacacttctcccagcagacctccatgaagggatctctgtcagacttgattgttat ttttccagctcatttgcaccaggtttgctctctgcaaggaagagtacaagacagcattgtcctgaacaggtatctcttgg ctagaccagcagcttccttgactagaccaattgaggattatcctcctcctcctcctcgtcatcagatatgcaaatttcac acaactgccaggagtttggctggttcaaaggccgcctctctccattggaccagcgagcgagcagtcagcatcctcctgct tggactcctgccagcagcctatctgtatcctggagcagctgtggattactccctggcagcaactctcacactccacgggc actggggcctggggcaacttgtaactgactatgtccacggaaagacctccattaaactggccaatgctggcctctaccta ctttcggcagtcacctttgcaggcctctgctacttcaactaccacgacgtaggcatctgcagggcggtggcgatgctgtg gagcctctgatccctgccaagagagtccagcagccgttcactgctgcctctgcttctttacgctattaccgagcccttgc gggtgggcaagagaacaacgaagggcgtgctttgcatgtagcagaacggctgctgggaaacacccacatccatgtccaca gctgttgccattcagaagacctgggatctctcactaaggcgagaattagacccgaaggaagctggggaaaagcacccagg caaagctttggcttatgctgggagcctctgcagatgggaggcccttgacctttcaaactgcaggctcagctcagcatcat tcatgttgataatcctgtctcgagtttctggctctcttgttgcaaatgaatgaagtatgtacgtggcatcttgcacaatg caaaagggaagtctaaactatgtacaataaaggatttgtagaacctgcaactgtgcgagtctgaaatccagggtttgccc attccgttgtctctggagatgtcaggttttgttgggcagatttatccttttgatgattgagtaaagttgagaaaagaagt acatacttcatttaaatgtatcatcttaacgttgtttaaaaaaaaaaaagttttggatatctttatatcccacctcccaa gctaacaacataaacatactatacaaaatatgccttggtacgtgtttaaaactgatgaaaaaagtagatcagtgcagaac ctgtgtgggaggtttgaaaaaccaccttgtgtggacatgtcctggcatggcactttcagacgtttcaaacaagagtgaaa gttcctcttaaaaaatactgattgtggtttaactggaacattacagctcattctgcccccttatcagtgtggagctaaaa catctccaagagaaatcatgtatgcatttgggtcacagaatcgcctcttgctcaaagccagctcctgcacatccttcctg aggttgaatttagcataggctgggaacctgatggctgatacagagcttagaaacaataccttttccatcgtaagatctag aaacttgctttagaaataaacagatttccagaatctgccaaaatggctgtcttgttctgagattcaccctcctcttttgt cttgcgttctctgatttctcccccaaaaatggtgttttggcttcttgatgctgagattgcaattgaattgtctttttgtt ctgggccaactcgatctttgtttagaaagagagattatgatgttgaccttggccattagagcttagccttttgaagaaag cctatctttctcttagttggttttgggagaagtactgcatgcgccctcttttctcctggtacccttcttttgtgtggacc aattttctgattgcagtgtgagagtttccctgcatttgaaatgtattttttattatttaatgggctaaaagaatatatca tttgaagaaagcaaaataatacagttattagtaaacttacgcacagctagaattgat |
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Protein
| Protein ID | habu1_s1961_g07139.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07139.t1 MSCAKRLVTDKVVSMKRLTQLARQVSVRESSLEPGLSTHFSQQTSMKGSLSDLIVIFPAHLHQVCSLQGRVQDSIVLNRY LLARPAASLTRPIEDYPPPPPRHQICKFHTTARSLAGSKAASLHWTSERAVSILLLGLLPAAYLYPGAAVDYSLAATLTL HGHWGLGQLVTDYVHGKTSIKLANAGLYLLSAVTFAGLCYFNYHDVGICRAVAMLWSL |
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