Gene
| Gene Model ID | habu1_s1961_g07144 |
|---|---|
| Locus | habu1_scaffold1961 : 855863 ... 862016 : - |
| To GenomeBrowser | habu1_scaffold1961:855863..862016 |
| Genes list of scaffold | habu1_scaffold1961 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uncharacterized protein c11orf52 homolog | GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1961_g07144.t1 | 1 | 1 | DUF4578 | 1 | 123 | 3.5e-27 | 95.2 | 6.3e-31 | 4.7e-27 | 94.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1961_g07144.t1 | gi|602631569|ref|XP_007422684.1| | PREDICTED: uncharacterized protein C11orf52 homolog [Python bivittatus] | 0.0 |
| habu1_s1961_g07144.t1 | gi|637356196|ref|XP_008119278.1| | PREDICTED: uncharacterized protein C11orf52 homolog [Anolis carolinensis] | 0.0 |
| habu1_s1961_g07144.t1 | gi|558107831|ref|XP_006111271.1| | PREDICTED: uncharacterized protein C11orf52 homolog isoform X2 [Pelodiscus sinensis] | 0.0 |
| habu1_s1961_g07144.t1 | gi|558107826|ref|XP_006111270.1| | PREDICTED: uncharacterized protein C11orf52 homolog isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s1961_g07144.t1 | gi|719766479|ref|XP_010217725.1| | PREDICTED: uncharacterized protein C11orf52 homolog [Tinamus guttatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.7 |
| Venom grand-1 | 6.3 |
| Pit, infrared sensing | 5.6 |
| Nose | 8.1 |
| Brain-1 | 2.8 |
| Eye | 5.8 |
| fetal fibroblast | 4.9 |
| venom gland-2 | 4.1 |
| Brain-2 | 2.7 |
| Spleen | 1.5 |
| Lung | 13.3 |
| Liver | 0.8 |
| Kidney | 6.0 |
| Pancreas | 2.0 |
| Small intestine | 4.5 |
| Large intestine | 3.4 |
| Stomach | 4.3 |
| heart | 4.1 |
| ovary | 0.6 |
| cheek muscle | 7.2 |
Transcript
| Transcript ID | habu1_s1961_g07144.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07144.t1 ggccgaggagccgcgaccaggaagcggctggcaccatggggaaccgctgcggctgctgcgccggccgcaactgcccttcg ctattgaagagggaaaaagaaaaaccagatattagaatcagtaagccaagtttacaaaccccggaaatcaacaagggtct tgacgtggcccccgtgtacgatgacgtctcggagttcccggtctacgccacggtgagcaagccgaagaacatgaagctca atgaaagcagcgtgcattacgccgatatccaggtcttcacgaagagccgtgaacgttcagctgaggaggtgaaaaacctc cagtcgcagaatgcaacggaatacgctaccctgaatttcccccgagcccccctgaaatatgacaacaagaacgggactct ggtataagtgccgaagatgccgttctggaagaaaatagacatcagacactgcaggtgctcagttggttcaaaaaaaaatc gctatctgggtcaggtcaaaatggactcgtgggaataagatatttttttcttgggtctgccgagaaaatgagccctttgg gcaatggaataagtgatgtttctgaggaaaaatggcttcatggattgtgttaccaagcaagggggcaaactggaggacga agcccagctgatatgtggaataagcaacataaagctttgcaagatttttaaaaac |
|
Protein
| Protein ID | habu1_s1961_g07144.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07144.t1 MGNRCGCCAGRNCPSLLKREKEKPDIRISKPSLQTPEINKGLDVAPVYDDVSEFPVYATVSKPKNMKLNESSVHYADIQV FTKSRERSAEEVKNLQSQNATEYATLNFPRAPLKYDNKNGTLV |
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